RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 RPL7L1Q6DKI1 246 aaKnown RBP13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 TOMM20LQ6UXN7 152 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 LINC00482Q8N8I6 264 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 C20orf24Q9BUV8 137 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 GGTLC1Q9BX51 225 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 WDR61Q9GZS3 305 aaKnown RBP13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 ARL6Q9H0F7 186 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 RFNGQ9Y644 331 aa13.75□□□□□ -0.21
TRAPPC4-203ENST00000447216 EDN2P20800 178 aa13.74□□□□□ -0.21
TRAPPC4-203ENST00000447216 CAMLGP49069 296 aa13.74□□□□□ -0.21
TRAPPC4-203ENST00000447216 C1QL4Q86Z23 238 aa13.74□□□□□ -0.21
TRAPPC4-203ENST00000447216 C9orf62Q8N4C0 152 aa13.74□□□□□ -0.21
TRAPPC4-203ENST00000447216 BPIFCQ8NFQ6 507 aa13.74□□□□□ -0.21
TRAPPC4-203ENST00000447216 SCGB1C1Q8TD33 95 aa13.74□□□□□ -0.21
TRAPPC4-203ENST00000447216 Q8WTZ3 238 aa13.74□□□□□ -0.21
TRAPPC4-203ENST00000447216 TMEM190Q8WZ59 177 aa13.74□□□□□ -0.21
TRAPPC4-203ENST00000447216 ZFAND3Q9H8U3 227 aa13.74□□□□□ -0.21
TRAPPC4-203ENST00000447216 CYTL1Q9NRR1 136 aa13.74□□□□□ -0.21
TRAPPC4-203ENST00000447216 SLC45A2Q9UMX9 530 aa13.74□□□□□ -0.21
TRAPPC4-203ENST00000447216 OVOL1O14753 267 aa13.73□□□□□ -0.21
TRAPPC4-203ENST00000447216 FABP1P07148 127 aa13.73□□□□□ -0.21
TRAPPC4-203ENST00000447216 RAB31Q13636 194 aa13.73□□□□□ -0.21
TRAPPC4-203ENST00000447216 OPCMLQ14982 345 aa13.73□□□□□ -0.21
TRAPPC4-203ENST00000447216 MIC13Q5XKP0 118 aa13.73□□□□□ -0.21
TRAPPC4-203ENST00000447216 LAMTOR1Q6IAA8 161 aa13.73□□□□□ -0.21
TRAPPC4-203ENST00000447216 OR51G1Q8NGK1 321 aa13.73□□□□□ -0.21
TRAPPC4-203ENST00000447216 ARPC5LQ9BPX5 153 aa13.73□□□□□ -0.21
TRAPPC4-203ENST00000447216 RSG1Q9BU20 258 aa13.73□□□□□ -0.21
TRAPPC4-203ENST00000447216 NPCDR1Q9BY65 106 aa13.73□□□□□ -0.21
TRAPPC4-203ENST00000447216 KANTRA0A1W2PQU2 76 aa13.72□□□□□ -0.21
TRAPPC4-203ENST00000447216 TAAR5O14804 337 aa13.72□□□□□ -0.21
TRAPPC4-203ENST00000447216 BCL2L11O43521 198 aa13.72□□□□□ -0.21
TRAPPC4-203ENST00000447216 MPDU1O75352 247 aa13.72□□□□□ -0.21
TRAPPC4-203ENST00000447216 IL4P05112 153 aa13.72□□□□□ -0.21
TRAPPC4-203ENST00000447216 LYZP61626 148 aa13.72□□□□□ -0.21
TRAPPC4-203ENST00000447216 ZNF266Q14584 549 aa13.72□□□□□ -0.21
TRAPPC4-203ENST00000447216 TM4SF20Q53R12 229 aa13.72□□□□□ -0.21
TRAPPC4-203ENST00000447216 REC114Q7Z4M0 266 aa13.72□□□□□ -0.21
TRAPPC4-203ENST00000447216 HSD17B11Q8NBQ5 300 aa13.72□□□□□ -0.21
TRAPPC4-203ENST00000447216 PBDC1Q9BVG4 233 aa13.72□□□□□ -0.21
TRAPPC4-203ENST00000447216 BORCS7-ASMTA0A0B4J1R7 106 aa13.71□□□□□ -0.21
TRAPPC4-203ENST00000447216 WI2-2373I1.2A0A1W2PRP0 233 aa13.71□□□□□ -0.21
TRAPPC4-203ENST00000447216 LINC00869P0C866 280 aa13.71□□□□□ -0.21
TRAPPC4-203ENST00000447216 SELENOTP62341 195 aa13.71□□□□□ -0.21
TRAPPC4-203ENST00000447216 USF2Q15853 346 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC4-203ENST00000447216 STPG3Q8N7X2 389 aa13.71□□□□□ -0.21
TRAPPC4-203ENST00000447216 PARD6GQ9BYG4 376 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC4-203ENST00000447216 DOK5Q9P104 306 aa13.71□□□□□ -0.21
TRAPPC4-203ENST00000447216 NOTCH3Q9UM47 2321 aa13.71□□□□□ -0.21
TRAPPC4-203ENST00000447216 IGHV3-49A0A0A0MS15 119 aa13.7□□□□□ -0.22
TRAPPC4-203ENST00000447216 LGALS9O00182 355 aa13.7□□□□□ -0.22
TRAPPC4-203ENST00000447216 ZNF709Q8N972 641 aa13.7□□□□□ -0.22
TRAPPC4-203ENST00000447216 OR9G4Q8NGQ1 327 aa13.7□□□□□ -0.22
TRAPPC4-203ENST00000447216 RNF125Q96EQ8 232 aa13.7□□□□□ -0.22
TRAPPC4-203ENST00000447216 ZNF471Q9BX82 626 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-203ENST00000447216 UFC1Q9Y3C8 167 aa13.7□□□□□ -0.22
TRAPPC4-203ENST00000447216 PXMP4Q9Y6I8 212 aa13.7□□□□□ -0.22
TRAPPC4-203ENST00000447216 TMEM213A2RRL7 107 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 ORM2P19652 201 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 ATP6V0CP27449 155 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 RPL29P47914 159 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 B2MP61769 119 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 PRR20EP86478 221 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 PRR20CP86479 221 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 PRR20DP86480 221 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 PRR20BP86481 221 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 PRR20AP86496 221 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 OR1B1Q8NGR6 318 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 SH3BGRL3Q9H299 93 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 SLC39A9Q9NUM3 307 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 SELENOKQ9Y6D0 94 aa13.69□□□□□ -0.22
TRAPPC4-203ENST00000447216 IGHV3OR16-13A0A075B7E8 117 aa13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 IGHV3-74A0A0B4J1X5 117 aa13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 C2orf70A6NJV1 201 aa13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 A8MWP6 167 aa13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 C17orf112F2Z3M2 114 aa13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 CSN3P07498 182 aa13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 CD33P20138 364 aa13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 IL34Q6ZMJ4 242 aa13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 ADAMTSL5Q6ZMM2 481 aa13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 GINS3Q9BRX5 216 aa13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 DAZ1Q9NQZ3 744 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 PEMTQ9UBM1 199 aa13.68□□□□□ -0.22
TRAPPC4-203ENST00000447216 IGHV3-66A0A0C4DH42 116 aa13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 K7EMT4 169 aa13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 JTBO76095 146 aa13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 APOHP02749 345 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 HNRNPCP07910 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 ELLP55199 621 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 GCSAMLQ5JQS6 135 aa13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 FFAR4Q5NUL3 377 aa13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 PATE2Q6UY27 113 aa13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 METTL26Q96S19 204 aa13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 ARV1Q9H2C2 271 aa13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 RABAC1Q9UI14 185 aa13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 DNHD1Q96M86 4753 aa13.67□□□□□ -0.22
TRAPPC4-203ENST00000447216 CFDP00746 253 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC4-203ENST00000447216 OR5G3P0C626 314 aa13.66□□□□□ -0.22
TRAPPC4-203ENST00000447216 FOLR2P14207 255 aa13.66□□□□□ -0.22
TRAPPC4-203ENST00000447216 NPPCP23582 126 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms