RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 C11orf68Q9H3H3 251 aaKnown RBP15.1■□□□□ 0.01
SDC1-205ENST00000447124 DUXBA0A1W2PPF3 345 aa15.09■□□□□ 0.01
SDC1-205ENST00000447124 SFT2D2O95562 160 aa15.09■□□□□ 0.01
SDC1-205ENST00000447124 C4BPBP20851 252 aa15.09■□□□□ 0.01
SDC1-205ENST00000447124 S100A5P33763 92 aa15.09■□□□□ 0.01
SDC1-205ENST00000447124 AP2S1P53680 142 aaPredicted RBP15.09■□□□□ 0.01
SDC1-205ENST00000447124 ATP5IP56385 69 aaPredicted RBP15.09■□□□□ 0.01
SDC1-205ENST00000447124 ZNF90Q03938 601 aa15.09■□□□□ 0.01
SDC1-205ENST00000447124 PPP1R1AQ13522 171 aa15.09■□□□□ 0.01
SDC1-205ENST00000447124 ACTL10Q5JWF8 245 aa15.09■□□□□ 0.01
SDC1-205ENST00000447124 C11orf45Q8TAV5 145 aa15.09■□□□□ 0.01
SDC1-205ENST00000447124 KLK5Q9Y337 293 aaPredicted RBP15.09■□□□□ 0.01
SDC1-205ENST00000447124 IAPPP10997 89 aa15.08■□□□□ 0
SDC1-205ENST00000447124 VAMP1P23763 118 aa15.08■□□□□ 0
SDC1-205ENST00000447124 PSMG4Q5JS54 123 aa15.08■□□□□ 0
SDC1-205ENST00000447124 DNAH10Q8IVF4 4471 aa15.07■□□□□ 0
SDC1-205ENST00000447124 FAM90A26D6RGX4 464 aa15.07■□□□□ 0
SDC1-205ENST00000447124 RBMY1A1P0DJD3 496 aaKnown RBP15.07■□□□□ 0
SDC1-205ENST00000447124 RBMY1CP0DJD4 496 aa15.07■□□□□ 0
SDC1-205ENST00000447124 SLC25A6P12236 298 aa15.07■□□□□ 0
SDC1-205ENST00000447124 EIF2B2P49770 351 aaKnown RBP15.07■□□□□ 0
SDC1-205ENST00000447124 RBMY1FQ15415 496 aaKnown RBP15.07■□□□□ 0
SDC1-205ENST00000447124 MORN3Q6PF18 240 aaPredicted RBP15.07■□□□□ 0
SDC1-205ENST00000447124 Q8NAQ8 132 aa15.07■□□□□ 0
SDC1-205ENST00000447124 CSNK1G2-AS1Q8NCQ2 148 aa15.07■□□□□ 0
SDC1-205ENST00000447124 RNF125Q96EQ8 232 aa15.07■□□□□ 0
SDC1-205ENST00000447124 SRRQ9GZT4 340 aa15.07■□□□□ 0
SDC1-205ENST00000447124 ZFP92A6NM28 416 aa15.06■□□□□ 0
SDC1-205ENST00000447124 SPP1P10451 314 aa15.06■□□□□ 0
SDC1-205ENST00000447124 SIGLEC15Q6ZMC9 328 aa15.06■□□□□ 0
SDC1-205ENST00000447124 DEDD2Q8WXF8 326 aa15.06■□□□□ 0
SDC1-205ENST00000447124 MAGT1Q9H0U3 335 aa15.06■□□□□ 0
SDC1-205ENST00000447124 NRN1Q9NPD7 142 aa15.06■□□□□ 0
SDC1-205ENST00000447124 CLEC5AQ9NY25 188 aa15.06■□□□□ 0
SDC1-205ENST00000447124 FBXL17Q9UF56 701 aa15.06■□□□□ 0
SDC1-205ENST00000447124 X6R8D5 127 aa15.06■□□□□ 0
SDC1-205ENST00000447124 IGKV1OR2-108A0A075B7D4 117 aa15.05■□□□□ -0
SDC1-205ENST00000447124 HOXB5P09067 269 aa15.05■□□□□ -0
SDC1-205ENST00000447124 BAK1Q16611 211 aa15.05■□□□□ -0
SDC1-205ENST00000447124 GSG1LQ6UXU4 331 aa15.05■□□□□ -0
SDC1-205ENST00000447124 SLC35E1Q96K37 410 aa15.05■□□□□ -0
SDC1-205ENST00000447124 PBDC1Q9BVG4 233 aa15.05■□□□□ -0
SDC1-205ENST00000447124 SEPSECSQ9HD40 501 aaKnown RBP15.05■□□□□ -0
SDC1-205ENST00000447124 TMED3Q9Y3Q3 217 aa15.05■□□□□ -0
SDC1-205ENST00000447124 PIGBOS1A0A0B4J2F0 54 aa15.04■□□□□ -0
SDC1-205ENST00000447124 ZNF705EA8MWA4 302 aaPredicted RBP15.04■□□□□ -0
SDC1-205ENST00000447124 OR2F1Q13607 317 aa15.04■□□□□ -0
SDC1-205ENST00000447124 TMEM41BQ5BJD5 291 aa15.04■□□□□ -0
SDC1-205ENST00000447124 GGNBP1Q5YKI7 109 aa15.04■□□□□ -0
SDC1-205ENST00000447124 CENPSQ8N2Z9 138 aa15.04■□□□□ -0
SDC1-205ENST00000447124 IGHV4-28A0A0C4DH34 117 aa15.03■□□□□ -0
SDC1-205ENST00000447124 PRSS46E5RG02 174 aa15.03■□□□□ -0
SDC1-205ENST00000447124 H3BMM0 161 aa15.03■□□□□ -0
SDC1-205ENST00000447124 ZNF701M0R085 212 aaPredicted RBP15.03■□□□□ -0
SDC1-205ENST00000447124 DEFB1P60022 68 aa15.03■□□□□ -0
SDC1-205ENST00000447124 RAB11AP62491 216 aa15.03■□□□□ -0
SDC1-205ENST00000447124 OR8G2PQ6IF36 304 aa15.03■□□□□ -0
SDC1-205ENST00000447124 TRGV9Q99603 122 aa15.03■□□□□ -0
SDC1-205ENST00000447124 SDHCQ99643 169 aaPredicted RBP15.03■□□□□ -0
SDC1-205ENST00000447124 WDR12Q9GZL7 423 aaKnown RBP15.03■□□□□ -0
SDC1-205ENST00000447124 MFFQ9GZY8 342 aa15.03■□□□□ -0
SDC1-205ENST00000447124 PAIP2BQ9ULR5 123 aaKnown RBP15.03■□□□□ -0
SDC1-205ENST00000447124 FLVCR2Q9UPI3 526 aa15.03■□□□□ -0
SDC1-205ENST00000447124 ELOA3CA0A087WX78 387 aaPredicted RBP15.02■□□□□ -0
SDC1-205ENST00000447124 SNRPGP15A8MWD9 76 aa15.02■□□□□ -0
SDC1-205ENST00000447124 WRBO00258 174 aa15.02■□□□□ -0
SDC1-205ENST00000447124 SYNGR2O43760 224 aa15.02■□□□□ -0
SDC1-205ENST00000447124 MED6O75586 246 aa15.02■□□□□ -0
SDC1-205ENST00000447124 THAP8Q8NA92 274 aa15.02■□□□□ -0
SDC1-205ENST00000447124 DNAH6Q9C0G6 4158 aa15.01□□□□□ -0.01
SDC1-205ENST00000447124 C9orf170A2RU37 121 aa15.01□□□□□ -0.01
SDC1-205ENST00000447124 LYZP61626 148 aa15.01□□□□□ -0.01
SDC1-205ENST00000447124 SNRPD3P62318 126 aaKnown RBP15.01□□□□□ -0.01
SDC1-205ENST00000447124 SPANXN2Q5MJ10 180 aa15.01□□□□□ -0.01
SDC1-205ENST00000447124 ADAP1O75689 374 aa15□□□□□ -0.01
SDC1-205ENST00000447124 MIFP14174 115 aa15□□□□□ -0.01
SDC1-205ENST00000447124 ID3Q02535 119 aa15□□□□□ -0.01
SDC1-205ENST00000447124 GDF5OSQ5U4N7 250 aa15□□□□□ -0.01
SDC1-205ENST00000447124 TMEM182Q6ZP80 229 aaPredicted RBP15□□□□□ -0.01
SDC1-205ENST00000447124 RPP25LQ8N5L8 163 aaKnown RBP15□□□□□ -0.01
SDC1-205ENST00000447124 CIB3Q96Q77 187 aaPredicted RBP15□□□□□ -0.01
SDC1-205ENST00000447124 SOCS3O14543 225 aa14.99□□□□□ -0.01
SDC1-205ENST00000447124 NDUFB6O95139 128 aa14.99□□□□□ -0.01
SDC1-205ENST00000447124 NKX2-1P43699 371 aaPredicted RBP14.99□□□□□ -0.01
SDC1-205ENST00000447124 UBE2MP61081 183 aaKnown RBP14.99□□□□□ -0.01
SDC1-205ENST00000447124 SPANXN5Q5MJ07 72 aa14.99□□□□□ -0.01
SDC1-205ENST00000447124 C1orf194Q5T5A4 169 aa14.99□□□□□ -0.01
SDC1-205ENST00000447124 LGALS9CQ6DKI2 356 aa14.99□□□□□ -0.01
SDC1-205ENST00000447124 HRH4Q9H3N8 390 aa14.99□□□□□ -0.01
SDC1-205ENST00000447124 XCL2Q9UBD3 114 aa14.99□□□□□ -0.01
SDC1-205ENST00000447124 TBC1D24Q9ULP9 559 aa14.99□□□□□ -0.01
SDC1-205ENST00000447124 FRAS1Q86XX4 4008 aa14.98□□□□□ -0.01
SDC1-205ENST00000447124 LINC00854A0A1B0GVQ3 168 aa14.98□□□□□ -0.01
SDC1-205ENST00000447124 NAP1L6A6NFF2 107 aa14.98□□□□□ -0.01
SDC1-205ENST00000447124 DEDDO75618 318 aa14.98□□□□□ -0.01
SDC1-205ENST00000447124 FABP1P07148 127 aa14.98□□□□□ -0.01
SDC1-205ENST00000447124 HLA-DRB4P13762 266 aa14.98□□□□□ -0.01
SDC1-205ENST00000447124 GATA2P23769 480 aaPredicted RBP14.98□□□□□ -0.01
SDC1-205ENST00000447124 NUP62P37198 522 aaPredicted RBP14.98□□□□□ -0.01
SDC1-205ENST00000447124 C17orf77Q96MU5 243 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms