RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 TMEM252Q8N6L7 170 aa16.54■□□□□ 0.24
APOE-204ENST00000446996 NARS2Q96I59 477 aaKnown RBP16.54■□□□□ 0.24
APOE-204ENST00000446996 SPAG8Q99932 426 aaPredicted RBP16.54■□□□□ 0.24
APOE-204ENST00000446996 MED28Q9H204 178 aa16.54■□□□□ 0.24
APOE-204ENST00000446996 U3KQE9 123 aa16.54■□□□□ 0.24
APOE-204ENST00000446996 IL4P05112 153 aa16.53■□□□□ 0.24
APOE-204ENST00000446996 HNRNPCP07910 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
APOE-204ENST00000446996 PET100P0DJ07 73 aa16.53■□□□□ 0.24
APOE-204ENST00000446996 P2RY1P47900 373 aa16.53■□□□□ 0.24
APOE-204ENST00000446996 SULT1A1P50225 295 aa16.53■□□□□ 0.24
APOE-204ENST00000446996 GTSCR1Q86UQ5 136 aa16.53■□□□□ 0.24
APOE-204ENST00000446996 Q8N1Y9 231 aa16.53■□□□□ 0.24
APOE-204ENST00000446996 PPP1R1CQ8WVI7 109 aa16.53■□□□□ 0.24
APOE-204ENST00000446996 WDR89Q96FK6 387 aaPredicted RBP16.53■□□□□ 0.24
APOE-204ENST00000446996 SMAD5-AS1Q9Y6J3 95 aa16.53■□□□□ 0.24
APOE-204ENST00000446996 S100A11P31949 105 aa16.52■□□□□ 0.24
APOE-204ENST00000446996 ZNF90Q03938 601 aa16.52■□□□□ 0.24
APOE-204ENST00000446996 ARL16Q0P5N6 197 aa16.52■□□□□ 0.24
APOE-204ENST00000446996 DEFB121Q5J5C9 76 aa16.52■□□□□ 0.24
APOE-204ENST00000446996 FAM90A2PQ658T7 463 aa16.52■□□□□ 0.24
APOE-204ENST00000446996 STX12Q86Y82 276 aa16.52■□□□□ 0.24
APOE-204ENST00000446996 ASB13Q8WXK3 278 aa16.52■□□□□ 0.24
APOE-204ENST00000446996 RNF125Q96EQ8 232 aa16.52■□□□□ 0.24
APOE-204ENST00000446996 RNF2Q99496 336 aa16.52■□□□□ 0.24
APOE-204ENST00000446996 PFDN2Q9UHV9 154 aa16.52■□□□□ 0.24
APOE-204ENST00000446996 A8MZ25 164 aa16.51■□□□□ 0.23
APOE-204ENST00000446996 MPC2O95563 127 aa16.51■□□□□ 0.23
APOE-204ENST00000446996 NUP62P37198 522 aaPredicted RBP16.51■□□□□ 0.23
APOE-204ENST00000446996 SELENOTP62341 195 aa16.51■□□□□ 0.23
APOE-204ENST00000446996 GUCA2BQ16661 112 aa16.51■□□□□ 0.23
APOE-204ENST00000446996 ATP6V1FQ16864 119 aa16.51■□□□□ 0.23
APOE-204ENST00000446996 ST8SIA2Q92186 375 aa16.51■□□□□ 0.23
APOE-204ENST00000446996 GRAMD2BQ96HH9 432 aa16.51■□□□□ 0.23
APOE-204ENST00000446996 SLC25A31Q9H0C2 315 aa16.51■□□□□ 0.23
APOE-204ENST00000446996 RABAC1Q9UI14 185 aa16.51■□□□□ 0.23
APOE-204ENST00000446996 SMCO3A2RU48 225 aa16.5■□□□□ 0.23
APOE-204ENST00000446996 H0YIZ8 118 aa16.5■□□□□ 0.23
APOE-204ENST00000446996 RRAS2P62070 204 aaPredicted RBP16.5■□□□□ 0.23
APOE-204ENST00000446996 HBG1P69891 147 aa16.5■□□□□ 0.23
APOE-204ENST00000446996 HBG2P69892 147 aa16.5■□□□□ 0.23
APOE-204ENST00000446996 SLC38A11Q08AI6 406 aa16.5■□□□□ 0.23
APOE-204ENST00000446996 USF2Q15853 346 aaPredicted RBP16.5■□□□□ 0.23
APOE-204ENST00000446996 TEPPQ6URK8 271 aa16.5■□□□□ 0.23
APOE-204ENST00000446996 BPIFCQ8NFQ6 507 aa16.5■□□□□ 0.23
APOE-204ENST00000446996 SLC45A2Q9UMX9 530 aa16.5■□□□□ 0.23
APOE-204ENST00000446996 IGSF23A1L1A6 192 aa16.49■□□□□ 0.23
APOE-204ENST00000446996 CST7O76096 145 aa16.49■□□□□ 0.23
APOE-204ENST00000446996 APOHP02749 345 aaPredicted RBP16.49■□□□□ 0.23
APOE-204ENST00000446996 CXCL3P19876 107 aa16.49■□□□□ 0.23
APOE-204ENST00000446996 EIF2B2P49770 351 aaKnown RBP16.49■□□□□ 0.23
APOE-204ENST00000446996 FCN2Q15485 313 aa16.49■□□□□ 0.23
APOE-204ENST00000446996 LRRC37A5PQ49AS3 106 aa16.49■□□□□ 0.23
APOE-204ENST00000446996 RNF126Q9BV68 326 aa16.49■□□□□ 0.23
APOE-204ENST00000446996 OR5AC2Q9NZP5 309 aa16.49■□□□□ 0.23
APOE-204ENST00000446996 IGHV3-49A0A0A0MS15 119 aa16.48■□□□□ 0.23
APOE-204ENST00000446996 TRAV2A0A0B4J234 112 aa16.48■□□□□ 0.23
APOE-204ENST00000446996 S100A7P31151 101 aa16.48■□□□□ 0.23
APOE-204ENST00000446996 BAXQ07812 192 aa16.48■□□□□ 0.23
APOE-204ENST00000446996 VWC2Q2TAL6 325 aa16.48■□□□□ 0.23
APOE-204ENST00000446996 CYP2G1PQ6ZSU1 146 aa16.48■□□□□ 0.23
APOE-204ENST00000446996 NEURL2Q9BR09 285 aa16.48■□□□□ 0.23
APOE-204ENST00000446996 IGHV3OR16-13A0A075B7E8 117 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 IGHV3-74A0A0B4J1X5 117 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 OR4C46A6NHA9 309 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 BUB3O43684 328 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 LYL1P12980 280 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 CD81P60033 236 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 PLP1P60201 277 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 PAFAH1B2P68402 229 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 OR2F1Q13607 317 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 C16orf54Q6UWD8 224 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 TCF24Q7RTU0 167 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 LILRB2Q8N423 598 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 OR11H7Q8NGC8 314 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 FAM110AQ9BQ89 295 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 UQCC1Q9NVA1 299 aa16.47■□□□□ 0.23
APOE-204ENST00000446996 AP2S1P53680 142 aaPredicted RBP16.46■□□□□ 0.23
APOE-204ENST00000446996 CMC4P56277 68 aaPredicted RBP16.46■□□□□ 0.23
APOE-204ENST00000446996 TMEM217Q8N7C4 229 aa16.46■□□□□ 0.23
APOE-204ENST00000446996 B9D2Q9BPU9 175 aa16.46■□□□□ 0.23
APOE-204ENST00000446996 TMEM147Q9BVK8 224 aa16.46■□□□□ 0.23
APOE-204ENST00000446996 HELTA6NFD8 242 aa16.45■□□□□ 0.22
APOE-204ENST00000446996 DFFBO76075 338 aa16.45■□□□□ 0.22
APOE-204ENST00000446996 CD7P09564 240 aa16.45■□□□□ 0.22
APOE-204ENST00000446996 LYZP61626 148 aa16.45■□□□□ 0.22
APOE-204ENST00000446996 EWSR1Q01844 656 aaKnown RBP eCLIP16.45■□□□□ 0.22
APOE-204ENST00000446996 C1orf194Q5T5A4 169 aa16.45■□□□□ 0.22
APOE-204ENST00000446996 PBDC1Q9BVG4 233 aa16.45■□□□□ 0.22
APOE-204ENST00000446996 WDR83OSQ9Y284 106 aa16.45■□□□□ 0.22
APOE-204ENST00000446996 SELENOKQ9Y6D0 94 aa16.45■□□□□ 0.22
APOE-204ENST00000446996 GIPP09681 153 aaPredicted RBP16.44■□□□□ 0.22
APOE-204ENST00000446996 RAB31Q13636 194 aa16.44■□□□□ 0.22
APOE-204ENST00000446996 PXDC1Q5TGL8 231 aa16.44■□□□□ 0.22
APOE-204ENST00000446996 TMEM182Q6ZP80 229 aaPredicted RBP16.44■□□□□ 0.22
APOE-204ENST00000446996 ZNF546Q86UE3 836 aa16.44■□□□□ 0.22
APOE-204ENST00000446996 CHAC2Q8WUX2 184 aa16.44■□□□□ 0.22
APOE-204ENST00000446996 GLMPQ8WWB7 406 aa16.44■□□□□ 0.22
APOE-204ENST00000446996 C19orf73Q9NVV2 129 aa16.44■□□□□ 0.22
APOE-204ENST00000446996 IGHV3-66A0A0C4DH42 116 aa16.43■□□□□ 0.22
APOE-204ENST00000446996 AGPAT2O15120 278 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms