RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 BTF3P20290 206 aaKnown RBP9.65□□□□□ -0.87
MSH6-204ENST00000445503 Q0VG73 95 aa9.65□□□□□ -0.87
MSH6-204ENST00000445503 UNQ5815/PRO19632Q6UWF5 114 aa9.65□□□□□ -0.87
MSH6-204ENST00000445503 Q6ZVH6 145 aa9.65□□□□□ -0.87
MSH6-204ENST00000445503 STXBP6Q8NFX7 210 aa9.65□□□□□ -0.87
MSH6-204ENST00000445503 C20orf144Q9BQM9 153 aa9.65□□□□□ -0.87
MSH6-204ENST00000445503 KIR2DL5BA0A0G2JN68 375 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 KIR2DL5BA0A0G2JPC4 375 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 ZNF138P52744 262 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 OR10J3Q5JRS4 329 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 TMEM200BQ69YZ2 307 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 KIR2DL5AQ8N109 375 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 SRSF12Q8WXF0 261 aaKnown RBP9.64□□□□□ -0.87
MSH6-204ENST00000445503 C11orf52Q96A22 123 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 HIGD1AQ9Y241 93 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 TM4SF5O14894 197 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 PRRX1P54821 245 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 TMPRSS3P57727 454 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 BSPH1Q075Z2 132 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 SAPCD1Q5SSQ6 148 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 SLC25A48Q6ZT89 311 aaKnown RBP9.64□□□□□ -0.87
MSH6-204ENST00000445503 FBXL15Q9H469 300 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 EPDR1Q9UM22 224 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 TCRBV4S1A1TA0A5B7 111 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 HBBP68871 147 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 LYPD2Q6UXB3 125 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 ZNF788Q6ZQV5 615 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 OR8B3Q8NGG8 313 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 HILPDAQ9Y5L2 63 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 LY96Q9Y6Y9 160 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 OTOGLQ3ZCN5 2332 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 C17orf100A8MU93 164 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 H0YJW9 148 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 TMEM249Q2WGJ8 235 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 NIT1Q86X76 327 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 OR4F17Q8NGA8 305 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 TMEM191AQ9H0A3 160 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 TP53TG3Q9ULZ0 132 aa9.64□□□□□ -0.87
MSH6-204ENST00000445503 FAM162BQ5T6X4 162 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 DDB2Q92466 427 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 TPSG1Q9NRR2 321 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 DSPP15924 2871 aaKnown RBP9.63□□□□□ -0.87
MSH6-204ENST00000445503 OR4C46A6NHA9 309 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 TEX43Q6ZNM6 134 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 OR8A1Q8NGG7 326 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 GPR82Q96P67 336 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 CHODLQ9H9P2 273 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 NCBP2LA6PVI3 153 aaKnown RBP9.63□□□□□ -0.87
MSH6-204ENST00000445503 WT1-ASQ06250 92 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 ZNF738Q8NE65 137 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 C18orf32Q8TCD1 76 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 TMEM186Q96B77 213 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 TMEM70Q9BUB7 260 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 SLC25A2Q9BXI2 301 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 MAP1LC3CQ9BXW4 147 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 DKK4Q9UBT3 224 aa9.63□□□□□ -0.87
MSH6-204ENST00000445503 IGHV3-35A0A0C4DH35 117 aa9.62□□□□□ -0.87
MSH6-204ENST00000445503 Q9H3A6 140 aa9.62□□□□□ -0.87
MSH6-204ENST00000445503 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.62□□□□□ -0.87
MSH6-204ENST00000445503 OR5AL1P0C617 328 aa9.62□□□□□ -0.87
MSH6-204ENST00000445503 MC5RP33032 325 aa9.62□□□□□ -0.87
MSH6-204ENST00000445503 CA7P43166 264 aa9.62□□□□□ -0.87
MSH6-204ENST00000445503 RPP21Q9H633 154 aaKnown RBP9.62□□□□□ -0.87
MSH6-204ENST00000445503 FNDC4Q9H6D8 234 aaPredicted RBP9.62□□□□□ -0.87
MSH6-204ENST00000445503 E7EUB6 86 aa9.62□□□□□ -0.87
MSH6-204ENST00000445503 NHLH1Q02575 133 aa9.62□□□□□ -0.87
MSH6-204ENST00000445503 EXOC3-AS1Q8N2X6 119 aa9.62□□□□□ -0.87
MSH6-204ENST00000445503 FAM90A27PA6NNH2 459 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 CSN1S1P47710 185 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 ATP5IP56385 69 aaPredicted RBP9.61□□□□□ -0.87
MSH6-204ENST00000445503 GTF2H5Q6ZYL4 71 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 ZNF329Q86UD4 541 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 CIARTQ8N365 385 aaPredicted RBP9.61□□□□□ -0.87
MSH6-204ENST00000445503 SELENOKQ9Y6D0 94 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 FAM181BA6NEQ2 426 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 PRSS46E5RG02 174 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 IGHV3OR16-8A0A075B7F1 116 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 NUDT3O95989 172 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 FCGR2BP31994 310 aaPredicted RBP9.61□□□□□ -0.87
MSH6-204ENST00000445503 SPACA3Q8IXA5 215 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 ZNF503Q96F45 646 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 RNF114Q9Y508 228 aa9.61□□□□□ -0.87
MSH6-204ENST00000445503 hDV102S1A0JD36 115 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 MBD3L4A6NDZ8 208 aaPredicted RBP9.6□□□□□ -0.87
MSH6-204ENST00000445503 MBD3L3A6NE82 208 aaPredicted RBP9.6□□□□□ -0.87
MSH6-204ENST00000445503 MBD3L5A6NJ08 208 aaPredicted RBP9.6□□□□□ -0.87
MSH6-204ENST00000445503 STPG4Q8N801 248 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 C5orf17Q8NAS9 161 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 MBD3L2Q8NHZ7 208 aaPredicted RBP9.6□□□□□ -0.87
MSH6-204ENST00000445503 TRAV9-2A0A087WT02 112 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 DPF1Q92782 380 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 C1orf159Q96HA4 380 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 NDUFA4L2Q9NRX3 87 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 A0A1W2PPI3 338 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 GNG7O60262 68 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 IGLC2P0DOY2 106 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 CNTFRP26992 372 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 UQCRFS1P47985 274 aa9.6□□□□□ -0.87
MSH6-204ENST00000445503 CFAP161Q6P656 301 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms