RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 HSPB7Q9UBY9 170 aa8.57□□□□□ -1.04
TTC28-203ENST00000442232 SHPKQ9UHJ6 478 aa8.57□□□□□ -1.04
TTC28-203ENST00000442232 U3KQE9 123 aa8.57□□□□□ -1.04
TTC28-203ENST00000442232 KMT2AQ03164 3969 aa8.57□□□□□ -1.04
TTC28-203ENST00000442232 TRAV10A0A0B4J240 114 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 FABP12A6NFH5 140 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 ZNF705EA8MWA4 302 aaPredicted RBP8.56□□□□□ -1.04
TTC28-203ENST00000442232 FAM90A26D6RGX4 464 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 PSG1P11464 419 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 ATP5IP56385 69 aaPredicted RBP8.56□□□□□ -1.04
TTC28-203ENST00000442232 AP3S2P59780 193 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 RAB11AP62491 216 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 KLF9Q13886 244 aaPredicted RBP8.56□□□□□ -1.04
TTC28-203ENST00000442232 DYNC2LI1Q8TCX1 351 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 PPP1R14BQ96C90 147 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 RNF125Q96EQ8 232 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 RAB40CQ96S21 281 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 RBKSQ9H477 322 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 CLEC5AQ9NY25 188 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 PRR13Q9NZ81 148 aa8.56□□□□□ -1.04
TTC28-203ENST00000442232 HLA-DMBP28068 263 aa8.55□□□□□ -1.04
TTC28-203ENST00000442232 ID1P41134 155 aa8.55□□□□□ -1.04
TTC28-203ENST00000442232 OR8G2PQ6IF36 304 aa8.55□□□□□ -1.04
TTC28-203ENST00000442232 LYZL2Q7Z4W2 148 aa8.55□□□□□ -1.04
TTC28-203ENST00000442232 TMEM170AQ8WVE7 144 aa8.55□□□□□ -1.04
TTC28-203ENST00000442232 PAIP2BQ9ULR5 123 aaKnown RBP8.55□□□□□ -1.04
TTC28-203ENST00000442232 DUXBA0A1W2PPF3 345 aa8.54□□□□□ -1.04
TTC28-203ENST00000442232 BUB3O43684 328 aa8.54□□□□□ -1.04
TTC28-203ENST00000442232 GIG44P09565 113 aaPredicted RBP8.54□□□□□ -1.04
TTC28-203ENST00000442232 RBMY1A1P0DJD3 496 aaKnown RBP8.54□□□□□ -1.04
TTC28-203ENST00000442232 RBMY1CP0DJD4 496 aa8.54□□□□□ -1.04
TTC28-203ENST00000442232 GPX4P36969 197 aaPredicted RBP8.54□□□□□ -1.04
TTC28-203ENST00000442232 NKX2-1P43699 371 aaPredicted RBP8.54□□□□□ -1.04
TTC28-203ENST00000442232 LYZP61626 148 aa8.54□□□□□ -1.04
TTC28-203ENST00000442232 RBMY1FQ15415 496 aaKnown RBP8.54□□□□□ -1.04
TTC28-203ENST00000442232 Q6ZTC4 211 aa8.54□□□□□ -1.04
TTC28-203ENST00000442232 TMED4Q7Z7H5 227 aa8.54□□□□□ -1.04
TTC28-203ENST00000442232 MCFD2Q8NI22 146 aa8.54□□□□□ -1.04
TTC28-203ENST00000442232 COQ8AQ8NI60 647 aa8.54□□□□□ -1.04
TTC28-203ENST00000442232 XCL2Q9UBD3 114 aa8.54□□□□□ -1.04
TTC28-203ENST00000442232 X6R8D5 127 aa8.54□□□□□ -1.04
TTC28-203ENST00000442232 MED6O75586 246 aa8.53□□□□□ -1.04
TTC28-203ENST00000442232 HLA-DRB4P13762 266 aa8.53□□□□□ -1.04
TTC28-203ENST00000442232 VAMP1P23763 118 aa8.53□□□□□ -1.04
TTC28-203ENST00000442232 SUPT4H1P63272 117 aaKnown RBP8.53□□□□□ -1.04
TTC28-203ENST00000442232 RPP30P78346 268 aaKnown RBP8.53□□□□□ -1.04
TTC28-203ENST00000442232 PYDC2Q56P42 97 aa8.53□□□□□ -1.04
TTC28-203ENST00000442232 SAMD13Q5VXD3 122 aa8.53□□□□□ -1.04
TTC28-203ENST00000442232 TOMM5Q8N4H5 51 aa8.53□□□□□ -1.04
TTC28-203ENST00000442232 LINC00052Q96N35 136 aa8.53□□□□□ -1.04
TTC28-203ENST00000442232 APLNQ9ULZ1 77 aa8.53□□□□□ -1.04
TTC28-203ENST00000442232 HLA-DRB4X5D2U9 266 aa8.53□□□□□ -1.04
TTC28-203ENST00000442232 FRAS1Q86XX4 4008 aa8.52□□□□□ -1.05
TTC28-203ENST00000442232 IGHV4-4A0A075B6R2 117 aa8.52□□□□□ -1.05
TTC28-203ENST00000442232 ELOA3CA0A087WX78 387 aaPredicted RBP8.52□□□□□ -1.05
TTC28-203ENST00000442232 H3BMM0 161 aa8.52□□□□□ -1.05
TTC28-203ENST00000442232 H3BMQ9 156 aa8.52□□□□□ -1.05
TTC28-203ENST00000442232 IAPPP10997 89 aa8.52□□□□□ -1.05
TTC28-203ENST00000442232 S100A7P31151 101 aa8.52□□□□□ -1.05
TTC28-203ENST00000442232 TNFSF8P32971 234 aa8.52□□□□□ -1.05
TTC28-203ENST00000442232 PSMB3P49720 205 aa8.52□□□□□ -1.05
TTC28-203ENST00000442232 C1orf194Q5T5A4 169 aa8.52□□□□□ -1.05
TTC28-203ENST00000442232 CSNK1G2-AS1Q8NCQ2 148 aa8.52□□□□□ -1.05
TTC28-203ENST00000442232 CIB3Q96Q77 187 aaPredicted RBP8.52□□□□□ -1.05
TTC28-203ENST00000442232 SLIRPQ9GZT3 109 aaKnown RBP8.52□□□□□ -1.05
TTC28-203ENST00000442232 DEFB131BA0A096LNP1 70 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 TMEM189A5PLL7 270 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 CCDC160A6NGH7 325 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 SNRPGP15A8MWD9 76 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 CFDP00746 253 aaPredicted RBP8.51□□□□□ -1.05
TTC28-203ENST00000442232 IGKV3-20P01619 116 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 S100A5P33763 92 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 ZNF90Q03938 601 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 GAMTQ14353 236 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 TMEM128Q5BJH2 165 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 SPATA31B1PQ5VZV4 182 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 EBLN2Q6P2I7 272 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 FOXI2Q6ZQN5 318 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 OR8I2Q8N0Y5 310 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 SLC25A21Q9BQT8 299 aaPredicted RBP8.51□□□□□ -1.05
TTC28-203ENST00000442232 RNF126Q9BV68 326 aa8.51□□□□□ -1.05
TTC28-203ENST00000442232 IGHV3OR16-12A0A075B7B8 117 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 TEX48A0A1B0GUV7 120 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 AMBPP02760 352 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 SLC25A6P12236 298 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 GALR1P47211 349 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 MEOX2P50222 304 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 OR2F1Q13607 317 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 GGNBP1Q5YKI7 109 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 OR4B1Q8NGF8 309 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 DEDD2Q8WXF8 326 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 TRGV9Q99603 122 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 NDUFAF3Q9BU61 184 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 SAV1Q9H4B6 383 aaPredicted RBP8.5□□□□□ -1.05
TTC28-203ENST00000442232 CELA1Q9UNI1 258 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 TMED3Q9Y3Q3 217 aa8.5□□□□□ -1.05
TTC28-203ENST00000442232 DNAH6Q9C0G6 4158 aa8.49□□□□□ -1.05
TTC28-203ENST00000442232 SMIM9A6NGZ8 99 aa8.49□□□□□ -1.05
TTC28-203ENST00000442232 ISLRO14498 428 aa8.49□□□□□ -1.05
TTC28-203ENST00000442232 SPART-AS1P0CW21 52 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms