RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 AP2S1P53680 142 aaPredicted RBP9.46□□□□□ -0.9
CDCA4P4-201ENST00000435216 TMEM41BQ5BJD5 291 aa9.46□□□□□ -0.9
CDCA4P4-201ENST00000435216 LGI3Q8N145 548 aa9.46□□□□□ -0.9
CDCA4P4-201ENST00000435216 RAB2BQ8WUD1 216 aa9.46□□□□□ -0.9
CDCA4P4-201ENST00000435216 IL22RA2Q969J5 263 aa9.46□□□□□ -0.9
CDCA4P4-201ENST00000435216 HRH4Q9H3N8 390 aa9.46□□□□□ -0.9
CDCA4P4-201ENST00000435216 NRN1Q9NPD7 142 aa9.46□□□□□ -0.9
CDCA4P4-201ENST00000435216 HSPB7Q9UBY9 170 aa9.46□□□□□ -0.9
CDCA4P4-201ENST00000435216 SCP2D1Q9UJQ7 156 aa9.46□□□□□ -0.9
CDCA4P4-201ENST00000435216 A0A0B4J2A0 478 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 C11orf94C9JXX5 98 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 IGKV3-20P01619 116 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 TNFSF8P32971 234 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 CCR6P51684 374 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 SNRPD3P62318 126 aaKnown RBP9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 ZNF90Q03938 601 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 KLF9Q13886 244 aaPredicted RBP9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 SMCO1Q147U7 214 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 GDF5OSQ5U4N7 250 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 NOXA1Q86UR1 476 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 RNF125Q96EQ8 232 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 SCRT1Q9BWW7 348 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 SLIRPQ9GZT3 109 aaKnown RBP9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 SHPKQ9UHJ6 478 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 U3KQ87 197 aa9.45□□□□□ -0.9
CDCA4P4-201ENST00000435216 IGHV4-4A0A075B6R2 117 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 IGKV1D-37A0A075B6S9 117 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 TRAV10A0A0B4J240 114 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 FABP12A6NFH5 140 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 ZFP92A6NM28 416 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 H3BMM0 161 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 TMBIM6P55061 237 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 TCTAP57738 103 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 FXYD7P58549 80 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 GAMTQ14353 236 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 TMED4Q7Z7H5 227 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 OR1S1Q8NH92 325 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 SCGB3A2Q96PL1 93 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 WDR12Q9GZL7 423 aaKnown RBP9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 RABL2AQ9UBK7 228 aaPredicted RBP9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 RSL24D1Q9UHA3 163 aaKnown RBP9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 RABL2BQ9UNT1 228 aa9.44□□□□□ -0.9
CDCA4P4-201ENST00000435216 H3BMQ9 156 aa9.43□□□□□ -0.9
CDCA4P4-201ENST00000435216 IAPPP10997 89 aa9.43□□□□□ -0.9
CDCA4P4-201ENST00000435216 LYZP61626 148 aa9.43□□□□□ -0.9
CDCA4P4-201ENST00000435216 OR2F1Q13607 317 aa9.43□□□□□ -0.9
CDCA4P4-201ENST00000435216 C12orf74Q32Q52 190 aa9.43□□□□□ -0.9
CDCA4P4-201ENST00000435216 CENPSQ8N2Z9 138 aa9.43□□□□□ -0.9
CDCA4P4-201ENST00000435216 MCFD2Q8NI22 146 aa9.43□□□□□ -0.9
CDCA4P4-201ENST00000435216 LINC00052Q96N35 136 aa9.43□□□□□ -0.9
CDCA4P4-201ENST00000435216 SOSTQ9BQB4 213 aa9.43□□□□□ -0.9
CDCA4P4-201ENST00000435216 PAIP2BQ9ULR5 123 aaKnown RBP9.43□□□□□ -0.9
CDCA4P4-201ENST00000435216 IGHV3OR16-12A0A075B7B8 117 aa9.42□□□□□ -0.9
CDCA4P4-201ENST00000435216 ANXA3P12429 323 aa9.42□□□□□ -0.9
CDCA4P4-201ENST00000435216 HLA-DRB4P13762 266 aa9.42□□□□□ -0.9
CDCA4P4-201ENST00000435216 NUTF2P61970 127 aaKnown RBP9.42□□□□□ -0.9
CDCA4P4-201ENST00000435216 SLC35E1Q96K37 410 aa9.42□□□□□ -0.9
CDCA4P4-201ENST00000435216 C1QTNF4Q9BXJ3 329 aa9.42□□□□□ -0.9
CDCA4P4-201ENST00000435216 CACFD1Q9UGQ2 172 aa9.42□□□□□ -0.9
CDCA4P4-201ENST00000435216 HLA-DRB4X5D2U9 266 aa9.42□□□□□ -0.9
CDCA4P4-201ENST00000435216 VAMP1P23763 118 aa9.41□□□□□ -0.9
CDCA4P4-201ENST00000435216 GPX4P36969 197 aaPredicted RBP9.41□□□□□ -0.9
CDCA4P4-201ENST00000435216 NKX2-1P43699 371 aaPredicted RBP9.41□□□□□ -0.9
CDCA4P4-201ENST00000435216 EMP1P54849 157 aa9.41□□□□□ -0.9
CDCA4P4-201ENST00000435216 BCL7BQ9BQE9 202 aa9.41□□□□□ -0.9
CDCA4P4-201ENST00000435216 KRTAP17-1Q9BYP8 105 aa9.41□□□□□ -0.9
CDCA4P4-201ENST00000435216 SEPSECSQ9HD40 501 aaKnown RBP9.41□□□□□ -0.9
CDCA4P4-201ENST00000435216 IGKV1OR2-108A0A075B7D4 117 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 DEFB131BA0A096LNP1 70 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 F6UB75 175 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 NOL3O60936 208 aaKnown RBP9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 PITX3O75364 302 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 SRPXP78539 464 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 PYDC2Q56P42 97 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 OR8G2PQ6IF36 304 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 OR4B1Q8NGF8 309 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 COQ8AQ8NI60 647 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 TRIM63Q969Q1 353 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 PPP1R14BQ96C90 147 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 MAGT1Q9H0U3 335 aa9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 SAV1Q9H4B6 383 aaPredicted RBP9.4□□□□□ -0.9
CDCA4P4-201ENST00000435216 SNRPGP15A8MWD9 76 aa9.39□□□□□ -0.91
CDCA4P4-201ENST00000435216 SOCS3O14543 225 aa9.39□□□□□ -0.91
CDCA4P4-201ENST00000435216 NUP62P37198 522 aaPredicted RBP9.39□□□□□ -0.91
CDCA4P4-201ENST00000435216 RAB11AP62491 216 aa9.39□□□□□ -0.91
CDCA4P4-201ENST00000435216 ZNF705AQ6ZN79 300 aaPredicted RBP9.39□□□□□ -0.91
CDCA4P4-201ENST00000435216 TOMM5Q8N4H5 51 aa9.39□□□□□ -0.91
CDCA4P4-201ENST00000435216 ZNF709Q8N972 641 aa9.39□□□□□ -0.91
CDCA4P4-201ENST00000435216 RNF126Q9BV68 326 aa9.39□□□□□ -0.91
CDCA4P4-201ENST00000435216 SLC35B3Q9H1N7 401 aa9.39□□□□□ -0.91
CDCA4P4-201ENST00000435216 V9GYH0 126 aa9.39□□□□□ -0.91
CDCA4P4-201ENST00000435216 ZNF705FA8MVS1 300 aaPredicted RBP9.38□□□□□ -0.91
CDCA4P4-201ENST00000435216 WRBO00258 174 aa9.38□□□□□ -0.91
CDCA4P4-201ENST00000435216 AMBPP02760 352 aa9.38□□□□□ -0.91
CDCA4P4-201ENST00000435216 ZNF705DP0CH99 300 aaPredicted RBP9.38□□□□□ -0.91
CDCA4P4-201ENST00000435216 ZNF705BP0CI00 300 aaPredicted RBP9.38□□□□□ -0.91
CDCA4P4-201ENST00000435216 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
CDCA4P4-201ENST00000435216 FAUP35544 74 aaKnown RBP9.38□□□□□ -0.91
CDCA4P4-201ENST00000435216 ID1P41134 155 aa9.38□□□□□ -0.91
CDCA4P4-201ENST00000435216 PSMB3P49720 205 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms