RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 C1orf159Q96HA4 380 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 RABAC1Q9UI14 185 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 LY96Q9Y6Y9 160 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 K7ESF4 209 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 GNG5P63218 68 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 TNFAIP6P98066 277 aaPredicted RBP6.13□□□□□ -1.43
CPSF6-202ENST00000435070 ZNF826PQ6ZT77 177 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 C1orf210Q8IVY1 113 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 ATP6V0BQ99437 205 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 CDX2Q99626 313 aaPredicted RBP6.13□□□□□ -1.43
CPSF6-202ENST00000435070 BEX4Q9NWD9 120 aaPredicted RBP6.13□□□□□ -1.43
CPSF6-202ENST00000435070 EXPH5Q8NEV8 1989 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 A0A1B0GWB2 263 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 A0A1W2PPC4 97 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 LIFP15018 202 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 OR10D3Q8NH80 312 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 PTPRSQ13332 1948 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 IGLV3-32A0A0A0MS00 114 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 GFRA3O60609 400 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 TNFRSF1AP19438 455 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 RAC3P60763 192 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 UBE2L3P68036 154 aaKnown RBP6.12□□□□□ -1.43
CPSF6-202ENST00000435070 ZNF502Q8TBZ5 544 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 GRAMD2BQ96HH9 432 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 VCX2Q9H322 139 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 CADP27708 2225 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 PYYP10082 97 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 CRYBA4P53673 196 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 ZNF418Q8TF45 676 aaPredicted RBP6.12□□□□□ -1.43
CPSF6-202ENST00000435070 TMUB1Q9BVT8 246 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 PRDM14Q9GZV8 571 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 TANC2Q9HCD6 1990 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 PLXNB1O43157 2135 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 TRBV6-6A0A0A6YYG2 114 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 A0A0G2JMM0 328 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 A0A1W2PPB8 328 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 KIR3DP1A8MWS1 328 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 NCR2O95944 276 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 LYZP61626 148 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 ZNF562Q6V9R5 426 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 OR1L4Q8NGR5 311 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 TMEM167BQ9NRX6 74 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 TCF19Q9Y242 345 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 UFC1Q9Y3C8 167 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 H3BTX0 84 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 F2RL2O00254 374 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 AGFG2O95081 481 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 KIR2DL2P43627 348 aaPredicted RBP6.12□□□□□ -1.43
CPSF6-202ENST00000435070 FOXF2Q12947 444 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 MORN5Q5VZ52 161 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 NEGR1Q7Z3B1 354 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 VSTM2AQ8TAG5 236 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 ZNF503Q96F45 646 aa6.12□□□□□ -1.43
CPSF6-202ENST00000435070 TMEM30CPA0ZSE6 113 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 PPIAL4EA0A075B759 164 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.11□□□□□ -1.43
CPSF6-202ENST00000435070 J3QR06 171 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 PPIAL4FP0DN26 164 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 SEC11AP67812 179 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 S100A7L2Q5SY68 101 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 C21orf140B9A014 251 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 MGPP08493 103 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 COX8AP10176 69 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 RPL39P5Q59GN2 51 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 RNFT1Q5M7Z0 435 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 FDCSPQ8NFU4 85 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 RFPL3SP0C7P2 107 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 COX6B1P14854 86 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 OR9G1Q8NH87 305 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 RASL11BQ9BPW5 248 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 TET2Q6N021 2002 aaPredicted RBP6.11□□□□□ -1.43
CPSF6-202ENST00000435070 CD3EP07766 207 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 DUTP33316 252 aaKnown RBP6.11□□□□□ -1.43
CPSF6-202ENST00000435070 C3AR1Q16581 482 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 SH2D6Q7Z4S9 175 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 LEAP2Q969E1 77 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 HIST1H4GQ99525 98 aa6.11□□□□□ -1.43
CPSF6-202ENST00000435070 NPIPB11E5RHQ5 1161 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 PRSS2P07478 247 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 APELAP0DMC3 54 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 KLF5Q13887 457 aaPredicted RBP6.1□□□□□ -1.43
CPSF6-202ENST00000435070 PSG3Q16557 428 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 ADAMTSL5Q6ZMM2 481 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 NEU4Q8WWR8 484 aaPredicted RBP6.1□□□□□ -1.43
CPSF6-202ENST00000435070 SLC25A33Q9BSK2 321 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 LOC389332A0A1B0GUA5 103 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 GAGE12HA6NDE8 117 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 H3BRM9 83 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 J3QT63 122 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 LIPFP07098 398 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 K7ERJ3 54 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 APOBEC3AP31941 199 aaPredicted RBP6.1□□□□□ -1.43
CPSF6-202ENST00000435070 Q8TCH9 128 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 MYOZ3Q8TDC0 251 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 MBD6Q96DN6 1003 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 IDI2-AS1Q9NZ38 188 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 PCNX2A6NKB5 2137 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 TRAV8-2A0A0B4J237 113 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 TRAV17A0A0B4J275 112 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 HAX1O00165 279 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms