RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PPP5D1E7EU14 171 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 GADD45GO95257 159 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 NAPSAO96009 420 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 CRHP06850 196 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 IFI30P13284 250 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 NFYAP23511 347 aaPredicted RBP1.13□□□□□ -2.23
PTPN4-205ENST00000433888 EMP1P54849 157 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 YPEL3P61236 119 aaPredicted RBP1.13□□□□□ -2.23
PTPN4-205ENST00000433888 DYNLT1P63172 113 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 BRMS1LQ5PSV4 323 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 Q6ZRN7 208 aaPredicted RBP1.13□□□□□ -2.23
PTPN4-205ENST00000433888 AKAP14Q86UN6 197 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 OR13D1Q8NGV5 346 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 ZNF418Q8TF45 676 aaPredicted RBP1.13□□□□□ -2.23
PTPN4-205ENST00000433888 MRPL32Q9BYC8 188 aaKnown RBP1.13□□□□□ -2.23
PTPN4-205ENST00000433888 MAP1LC3BQ9GZQ8 125 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 CXCL16Q9H2A7 254 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 MIXL1Q9H2W2 232 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 LYRM2Q9NU23 88 aaPredicted RBP1.13□□□□□ -2.23
PTPN4-205ENST00000433888 PLXNA3P51805 1871 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 RGS12O14924 1447 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 SETD5Q9C0A6 1442 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 DENND4CQ5VZ89 1909 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 CCDC88CQ9P219 2028 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 A0A0D9SG52 128 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 GNG14A0A1W2PPG7 69 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 B4DSR2 109 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 LY6LH3BQJ8 138 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 NDUFB3O43676 98 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 GPX2P18283 190 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 SSR2P43308 183 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 ARPP19P56211 112 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 DEFB103AP81534 67 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 TSNQ15631 228 aaKnown RBP1.12□□□□□ -2.23
PTPN4-205ENST00000433888 DEFB113Q30KQ7 82 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 FKBP1CQ5VVH2 108 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 COA5Q86WW8 74 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 LINC00471Q8N535 108 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 SLC30A7Q8NEW0 376 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 GPX7Q96SL4 187 aaPredicted RBP1.12□□□□□ -2.23
PTPN4-205ENST00000433888 SERPINI1Q99574 410 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 OR2J1Q9GZK6 312 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 IMUPQ9GZP8 106 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 SH3BGRL3Q9H299 93 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 TMEM133Q9H2Q1 129 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 BOLA2Q9H3K6 86 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 BCL2L10Q9HD36 194 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 C8orf4Q9NR00 106 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 OR52A1Q9UKL2 312 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 EPDR1Q9UM22 224 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 NDUFAF1Q9Y375 327 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 LHFPL6Q9Y693 200 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 MYOFQ9NZM1 2061 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 SYNMO15061 1565 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 GLI3P10071 1580 aa1.12□□□□□ -2.23
PTPN4-205ENST00000433888 MED1Q15648 1581 aaPredicted RBP1.12□□□□□ -2.23
PTPN4-205ENST00000433888 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 J3QKU1 62 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 TIMM17BO60830 172 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 METTL15P1P0C7V9 234 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 OGNP20774 298 aaKnown RBP1.11□□□□□ -2.23
PTPN4-205ENST00000433888 UBE2BP63146 152 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 NDUFA5Q16718 116 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 Q1T7F1 81 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 BCL2L15Q5TBC7 163 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 HRCT1Q6UXD1 115 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 FP248Q71RG6 208 aaPredicted RBP1.11□□□□□ -2.23
PTPN4-205ENST00000433888 Q8IYB0 196 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 CLECL1Q8IZS7 167 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 OR4K15Q8NH41 348 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 PPTC7Q8NI37 304 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 MBD3L1Q8WWY6 194 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 ANP32BQ92688 251 aaKnown RBP1.11□□□□□ -2.23
PTPN4-205ENST00000433888 NPCDR1Q9BY65 106 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 TRAPPC2LQ9UL33 140 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 RNF11Q9Y3C5 154 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 RIMBP3CA6NJZ7 1639 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 RIMBP3BA6NNM3 1639 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 RIMBP3Q9UFD9 1639 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 STRCP1A6NGW2 1772 aa1.11□□□□□ -2.23
PTPN4-205ENST00000433888 BAZ2BQ9UIF8 2168 aaKnown RBP1.1□□□□□ -2.23
PTPN4-205ENST00000433888 ARHGEF28Q8N1W1 1705 aaKnown RBP1.1□□□□□ -2.23
PTPN4-205ENST00000433888 VWDEQ8N2E2 1590 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 FMN1Q68DA7 1419 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 TRAV14DV4A0A0A6YYC5 116 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 A0A1W2PRE2 83 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 AIPO00170 330 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 TCL1BO95988 128 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 TRGC2P03986 189 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 RPL7P18124 248 aaKnown RBP1.1□□□□□ -2.23
PTPN4-205ENST00000433888 S100GP29377 79 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 DYNLT3P51808 116 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 RAB4BP61018 213 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 ESRGQ1W209 222 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 PCOTHQ58A44 107 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 TAC4Q86UU9 113 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 OR2T35Q8NGX2 323 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 BORCS8Q96FH0 119 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 ZNF714Q96N38 554 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 SLC25A21Q9BQT8 299 aaPredicted RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms