RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 G3V3Q6 166 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 K7ERU9 68 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 MFSD11O43934 449 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 GGCTO75223 188 aaKnown RBP3.03□□□□□ -1.92
USP54-206ENST00000433394 HAND1O96004 215 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 IGKV1D-12P01611 117 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 CTSGP08311 255 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 METTL15P1P0C7V9 234 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 SULT1A3P0DMM9 295 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 SULT1A4P0DMN0 295 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 ZNF25P17030 456 aaPredicted RBP3.03□□□□□ -1.92
USP54-206ENST00000433394 RPL22P35268 128 aaKnown RBP3.03□□□□□ -1.92
USP54-206ENST00000433394 RPL35P42766 123 aaKnown RBP3.03□□□□□ -1.92
USP54-206ENST00000433394 MAP2K4P45985 399 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 SERPINB10P48595 397 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 DYNLT1P63172 113 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 MRPS10P82664 201 aaKnown RBP3.03□□□□□ -1.92
USP54-206ENST00000433394 GNA12Q03113 381 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 PPP1R1AQ13522 171 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 RSU1Q15404 277 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 TMEM128Q5BJH2 165 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 Q6ZRU5 148 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 MS4A6AQ9H2W1 248 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 RASL12Q9NYN1 266 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 HS3ST2Q9Y278 367 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 HDGFL3Q9Y3E1 203 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 RBM7Q9Y580 266 aaKnown RBP3.03□□□□□ -1.92
USP54-206ENST00000433394 DOCK6Q96HP0 2047 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 ATG2AQ2TAZ0 1938 aa3.03□□□□□ -1.92
USP54-206ENST00000433394 BDP1A6H8Y1 2624 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 ANKRD36A6QL64 1941 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 C5orf49A4QMS7 147 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 PRORSD1PA6NEY8 169 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 CCL16O15467 120 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 OR7C1O76099 320 aaPredicted RBP3.02□□□□□ -1.93
USP54-206ENST00000433394 CD7P09564 240 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 CA7P43166 264 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 LPAR6P43657 344 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 PIGPP57054 158 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 DNAJB13P59910 316 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 SURF2Q15527 256 aaPredicted RBP3.02□□□□□ -1.93
USP54-206ENST00000433394 GRK1Q15835 563 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 LRRC75BQ2VPJ9 315 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 SPANXN3Q5MJ09 141 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 LCN8Q6JVE9 175 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 LRRC28Q86X40 367 aaPredicted RBP3.02□□□□□ -1.93
USP54-206ENST00000433394 ZNF567Q8N184 647 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 ZFAND2AQ8N6M9 145 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 OR10P1Q8NGE3 313 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 HAVCR2Q8TDQ0 301 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 SLC37A2Q8TED4 501 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 FGF13Q92913 245 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 DCUN1D1Q96GG9 259 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 CNBD2Q96M20 576 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 NIT2Q9NQR4 276 aa3.02□□□□□ -1.93
USP54-206ENST00000433394 NYNRINQ9P2P1 1898 aaKnown RBP3.02□□□□□ -1.93
USP54-206ENST00000433394 NUMA1Q14980 2115 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 KIAA1549LQ6ZVL6 1849 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 CDH23Q9H251 3354 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 MYOFQ9NZM1 2061 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 LOC285095A0A1B0GVY8 99 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 EXOC1LA0A1B0GW35 172 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 DHRS12A0PJE2 317 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 C9orf170A2RU37 121 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 FAAHO00519 579 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 ORC5O43913 435 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 CRYGDP07320 174 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 GZMHP20718 246 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 DDTP30046 118 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 OPRM1P35372 400 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 TAS2R45P59539 299 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 RPS20P60866 119 aaKnown RBP3.01□□□□□ -1.93
USP54-206ENST00000433394 TBPL1P62380 186 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 RPS24P62847 133 aaKnown RBP3.01□□□□□ -1.93
USP54-206ENST00000433394 HIST1H3AP68431 136 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 H3F3AP84243 136 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 EMX2Q04743 252 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 CDK10Q15131 360 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 C1orf195Q5TG92 126 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 HCP5Q6MZN7 132 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 TOMM20LQ6UXN7 152 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 HIST2H3AQ71DI3 136 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 GLT6D1Q7Z4J2 308 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 GPR32P1Q8NGA4 272 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 OR5J2Q8NH18 312 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 OR4C6Q8NH72 309 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 LMX1AQ8TE12 382 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 LYSMD1Q96S90 227 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 GINS3Q9BRX5 216 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 HES4Q9HCC6 221 aa3.01□□□□□ -1.93
USP54-206ENST00000433394 IGLV10-54A0A075B6I4 117 aa3□□□□□ -1.93
USP54-206ENST00000433394 GRIFINA4D1Z8 144 aa3□□□□□ -1.93
USP54-206ENST00000433394 MAP1LC3B2A6NCE7 125 aa3□□□□□ -1.93
USP54-206ENST00000433394 FAM159BA6NKW6 160 aa3□□□□□ -1.93
USP54-206ENST00000433394 E7EQ34 232 aa3□□□□□ -1.93
USP54-206ENST00000433394 GSTZ1O43708 216 aaPredicted RBP3□□□□□ -1.93
USP54-206ENST00000433394 TNFSF15O95150 251 aa3□□□□□ -1.93
USP54-206ENST00000433394 APOA2P02652 100 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms