RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 BUB3O43684 328 aa10.25□□□□□ -0.77
SMARCE1-205ENST00000431889 TOMM40O96008 361 aa10.25□□□□□ -0.77
SMARCE1-205ENST00000431889 SULT1A3P0DMM9 295 aa10.25□□□□□ -0.77
SMARCE1-205ENST00000431889 SULT1A4P0DMN0 295 aa10.25□□□□□ -0.77
SMARCE1-205ENST00000431889 SLC25A4P12235 298 aa10.25□□□□□ -0.77
SMARCE1-205ENST00000431889 EIF2B2P49770 351 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-205ENST00000431889 OR2F1Q13607 317 aa10.25□□□□□ -0.77
SMARCE1-205ENST00000431889 GPR141Q7Z602 305 aa10.25□□□□□ -0.77
SMARCE1-205ENST00000431889 HRH4Q9H3N8 390 aa10.25□□□□□ -0.77
SMARCE1-205ENST00000431889 NRN1Q9NPD7 142 aa10.25□□□□□ -0.77
SMARCE1-205ENST00000431889 PCLOQ9Y6V0 5065 aa10.24□□□□□ -0.77
SMARCE1-205ENST00000431889 F6UB75 175 aa10.24□□□□□ -0.77
SMARCE1-205ENST00000431889 IAPPP10997 89 aa10.24□□□□□ -0.77
SMARCE1-205ENST00000431889 NMSQ5H8A3 153 aa10.24□□□□□ -0.77
SMARCE1-205ENST00000431889 PAIP2BQ9ULR5 123 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-205ENST00000431889 TMEM56-RWDD3S4R434 201 aa10.24□□□□□ -0.77
SMARCE1-205ENST00000431889 ZFP92A6NM28 416 aa10.23□□□□□ -0.77
SMARCE1-205ENST00000431889 B3GALNT1O75752 331 aa10.23□□□□□ -0.77
SMARCE1-205ENST00000431889 PRB4P10163 310 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-205ENST00000431889 LYZP61626 148 aa10.23□□□□□ -0.77
SMARCE1-205ENST00000431889 SNRPD3P62318 126 aaKnown RBP10.23□□□□□ -0.77
SMARCE1-205ENST00000431889 SUPT4H1P63272 117 aaKnown RBP10.23□□□□□ -0.77
SMARCE1-205ENST00000431889 LGI3Q8N145 548 aa10.23□□□□□ -0.77
SMARCE1-205ENST00000431889 CENPSQ8N2Z9 138 aa10.23□□□□□ -0.77
SMARCE1-205ENST00000431889 DTD1Q8TEA8 209 aa10.23□□□□□ -0.77
SMARCE1-205ENST00000431889 C15orf40Q8WUR7 153 aa10.23□□□□□ -0.77
SMARCE1-205ENST00000431889 RNF125Q96EQ8 232 aa10.23□□□□□ -0.77
SMARCE1-205ENST00000431889 IGKV1D-37A0A075B6S9 117 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 ANKRD20A5PA0PJZ0 165 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 AP2S1P53680 142 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 KLF9Q13886 244 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 ETFRF1Q6IPR1 90 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 OR4B1Q8NGF8 309 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 PRRT1Q99946 306 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 SLC35B3Q9H1N7 401 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 HTN3P15516 51 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 ALDH3B2P48448 385 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 GAMTQ14353 236 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 SMCO1Q147U7 214 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 SURF2Q15527 256 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 TMEM41BQ5BJD5 291 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 TMED4Q7Z7H5 227 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 OR1S1Q8NH92 325 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 MRPS26Q9BYN8 205 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 HSPB7Q9UBY9 170 aa10.22□□□□□ -0.77
SMARCE1-205ENST00000431889 IGLV2-18A0A075B6J9 118 aa10.21□□□□□ -0.78
SMARCE1-205ENST00000431889 PRM2P04554 102 aa10.21□□□□□ -0.78
SMARCE1-205ENST00000431889 HLA-DRB4P13762 266 aa10.21□□□□□ -0.78
SMARCE1-205ENST00000431889 TCTAP57738 103 aa10.21□□□□□ -0.78
SMARCE1-205ENST00000431889 MRPS10P82664 201 aaKnown RBP10.21□□□□□ -0.78
SMARCE1-205ENST00000431889 SSBP1Q04837 148 aaKnown RBP10.21□□□□□ -0.78
SMARCE1-205ENST00000431889 DYNC2LI1Q8TCX1 351 aa10.21□□□□□ -0.78
SMARCE1-205ENST00000431889 KCNIP3Q9Y2W7 256 aa10.21□□□□□ -0.78
SMARCE1-205ENST00000431889 HLA-DRB4X5D2U9 266 aa10.21□□□□□ -0.78
SMARCE1-205ENST00000431889 CCR6P51684 374 aa10.2□□□□□ -0.78
SMARCE1-205ENST00000431889 PPP1R14BQ96C90 147 aa10.2□□□□□ -0.78
SMARCE1-205ENST00000431889 MAGT1Q9H0U3 335 aa10.2□□□□□ -0.78
SMARCE1-205ENST00000431889 DNAH17Q9UFH2 4485 aa10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 PKD1P98161 4303 aa10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 CTDSPLO15194 276 aa10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 GATA2P23769 480 aaPredicted RBP10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 NUTF2P61970 127 aaKnown RBP10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 IGFL4Q6B9Z1 124 aa10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 COQ8AQ8NI60 647 aa10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 SLC35E1Q96K37 410 aa10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 C20orf173Q96LM9 149 aa10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 RNF126Q9BV68 326 aa10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 SCP2D1Q9UJQ7 156 aa10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 U3KQ87 197 aa10.19□□□□□ -0.78
SMARCE1-205ENST00000431889 IGKV1OR2-108A0A075B7D4 117 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 A0A0B4J2A0 478 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 TNFSF8P32971 234 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 NKX2-1P43699 371 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 ZNF709Q8N972 641 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 IL22RA2Q969J5 263 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 C1QTNF4Q9BXJ3 329 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 SAV1Q9H4B6 383 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 SLC25A22Q9H936 323 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 SHPKQ9UHJ6 478 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 FABP12A6NFH5 140 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 GSTZ1O43708 216 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 ZNF705DP0CH99 300 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 ZNF705BP0CI00 300 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 FAM222AQ5U5X8 452 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 FAM78BQ5VT40 261 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 ZNF705AQ6ZN79 300 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 TMEM182Q6ZP80 229 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 NDUFAF3Q9BU61 184 aa10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 CCDC59Q9P031 241 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-205ENST00000431889 ZNF705FA8MVS1 300 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1-205ENST00000431889 H3BP45 60 aa10.17□□□□□ -0.78
SMARCE1-205ENST00000431889 SOCS3O14543 225 aa10.17□□□□□ -0.78
SMARCE1-205ENST00000431889 AMBPP02760 352 aa10.17□□□□□ -0.78
SMARCE1-205ENST00000431889 VAMP1P23763 118 aa10.17□□□□□ -0.78
SMARCE1-205ENST00000431889 NOXA1Q86UR1 476 aa10.17□□□□□ -0.78
SMARCE1-205ENST00000431889 OR8I2Q8N0Y5 310 aa10.17□□□□□ -0.78
SMARCE1-205ENST00000431889 POM121L12Q8N7R1 296 aa10.17□□□□□ -0.78
SMARCE1-205ENST00000431889 SLIRPQ9GZT3 109 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-205ENST00000431889 WRBO00258 174 aa10.16□□□□□ -0.78
SMARCE1-205ENST00000431889 RTL8CO15255 209 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 279.2 ms