RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 NPIPB3Q92617 1050 aa11.85□□□□□ -0.51
VARS-216ENST00000428445 GPR146Q96CH1 333 aa11.85□□□□□ -0.51
VARS-216ENST00000428445 SCGB3A2Q96PL1 93 aa11.85□□□□□ -0.51
VARS-216ENST00000428445 PFDN2Q9UHV9 154 aa11.85□□□□□ -0.51
VARS-216ENST00000428445 U3KQ87 197 aa11.85□□□□□ -0.51
VARS-216ENST00000428445 IGHV3OR16-12A0A075B7B8 117 aa11.84□□□□□ -0.51
VARS-216ENST00000428445 PIGBOS1A0A0B4J2F0 54 aa11.84□□□□□ -0.51
VARS-216ENST00000428445 CRYM-AS1A6NIL9 109 aa11.84□□□□□ -0.51
VARS-216ENST00000428445 CTDSPLO15194 276 aa11.84□□□□□ -0.51
VARS-216ENST00000428445 AMBPP02760 352 aa11.84□□□□□ -0.51
VARS-216ENST00000428445 IL4P05112 153 aa11.84□□□□□ -0.51
VARS-216ENST00000428445 SLC24A4Q8NFF2 622 aa11.84□□□□□ -0.51
VARS-216ENST00000428445 PRRT1Q99946 306 aa11.84□□□□□ -0.51
VARS-216ENST00000428445 NDUFAF3Q9BU61 184 aa11.84□□□□□ -0.51
VARS-216ENST00000428445 NAA50Q9GZZ1 169 aaKnown RBP11.84□□□□□ -0.51
VARS-216ENST00000428445 PRR13Q9NZ81 148 aa11.84□□□□□ -0.51
VARS-216ENST00000428445 CEBPZOSA8MTT3 80 aa11.83□□□□□ -0.52
VARS-216ENST00000428445 RGS5O15539 181 aa11.83□□□□□ -0.52
VARS-216ENST00000428445 BUB3O43684 328 aa11.83□□□□□ -0.52
VARS-216ENST00000428445 AKAIN1P0CW23 69 aa11.83□□□□□ -0.52
VARS-216ENST00000428445 RD3LP0DJH9 198 aa11.83□□□□□ -0.52
VARS-216ENST00000428445 NUP62P37198 522 aaPredicted RBP11.83□□□□□ -0.52
VARS-216ENST00000428445 NMSQ5H8A3 153 aa11.83□□□□□ -0.52
VARS-216ENST00000428445 SMIM4Q8WVI0 70 aa11.83□□□□□ -0.52
VARS-216ENST00000428445 ACY3Q96HD9 319 aa11.83□□□□□ -0.52
VARS-216ENST00000428445 CACNG5Q9UF02 275 aa11.83□□□□□ -0.52
VARS-216ENST00000428445 ABCA13Q86UQ4 5058 aa11.83□□□□□ -0.52
VARS-216ENST00000428445 TOMM40O96008 361 aa11.82□□□□□ -0.52
VARS-216ENST00000428445 P0DMU3 169 aa11.82□□□□□ -0.52
VARS-216ENST00000428445 FAM231AP0DMU4 169 aa11.82□□□□□ -0.52
VARS-216ENST00000428445 FAM231CP0DMU5 169 aa11.82□□□□□ -0.52
VARS-216ENST00000428445 TMEM268Q5VZI3 342 aa11.82□□□□□ -0.52
VARS-216ENST00000428445 SIGLEC15Q6ZMC9 328 aa11.82□□□□□ -0.52
VARS-216ENST00000428445 OR51G1Q8NGK1 321 aa11.82□□□□□ -0.52
VARS-216ENST00000428445 MIXL1Q9H2W2 232 aa11.82□□□□□ -0.52
VARS-216ENST00000428445 NRN1Q9NPD7 142 aa11.82□□□□□ -0.52
VARS-216ENST00000428445 SULT1A3P0DMM9 295 aa11.81□□□□□ -0.52
VARS-216ENST00000428445 SULT1A4P0DMN0 295 aa11.81□□□□□ -0.52
VARS-216ENST00000428445 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
VARS-216ENST00000428445 PSG1P11464 419 aa11.81□□□□□ -0.52
VARS-216ENST00000428445 NPY1RP25929 384 aa11.81□□□□□ -0.52
VARS-216ENST00000428445 LINC00052Q96N35 136 aa11.81□□□□□ -0.52
VARS-216ENST00000428445 KRTAP4-5Q9BYR2 181 aa11.81□□□□□ -0.52
VARS-216ENST00000428445 WDR12Q9GZL7 423 aaKnown RBP11.81□□□□□ -0.52
VARS-216ENST00000428445 SCP2D1Q9UJQ7 156 aa11.81□□□□□ -0.52
VARS-216ENST00000428445 CTDSP2O14595 271 aa11.8□□□□□ -0.52
VARS-216ENST00000428445 HLA-DRB4P13762 266 aa11.8□□□□□ -0.52
VARS-216ENST00000428445 NKX2-1P43699 371 aaPredicted RBP11.8□□□□□ -0.52
VARS-216ENST00000428445 CCR6P51684 374 aa11.8□□□□□ -0.52
VARS-216ENST00000428445 ZNF705AQ6ZN79 300 aaPredicted RBP11.8□□□□□ -0.52
VARS-216ENST00000428445 NEU1Q99519 415 aa11.8□□□□□ -0.52
VARS-216ENST00000428445 HLA-DRB4X5D2U9 266 aa11.8□□□□□ -0.52
VARS-216ENST00000428445 A0A0B4J2A0 478 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 SMIM9A6NGZ8 99 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 IFNA10P01566 189 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 SPART-AS1P0CW21 52 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 HTN3P15516 51 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 GPX4P36969 197 aaPredicted RBP11.79□□□□□ -0.52
VARS-216ENST00000428445 KLF9Q13886 244 aaPredicted RBP11.79□□□□□ -0.52
VARS-216ENST00000428445 OR8G2PQ6IF36 304 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 OR4C16Q8NGL9 310 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 DIRAS2Q96HU8 199 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 CLUHP3Q96NS8 147 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 PBDC1Q9BVG4 233 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 HSPB7Q9UBY9 170 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 SHPKQ9UHJ6 478 aa11.79□□□□□ -0.52
VARS-216ENST00000428445 ANKRD20A5PA0PJZ0 165 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 TMEM189A5PLL7 270 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 ZNF705FA8MVS1 300 aaPredicted RBP11.78□□□□□ -0.52
VARS-216ENST00000428445 F6UB75 175 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 ZNF705DP0CH99 300 aaPredicted RBP11.78□□□□□ -0.52
VARS-216ENST00000428445 ZNF705BP0CI00 300 aaPredicted RBP11.78□□□□□ -0.52
VARS-216ENST00000428445 LGALS9BQ3B8N2 356 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 C1orf194Q5T5A4 169 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 FAM222AQ5U5X8 452 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 SPATA31B1PQ5VZV4 182 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 GPR141Q7Z602 305 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 ZNF575Q86XF7 245 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 UBE2DNLQ8IWF7 75 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 OR4B1Q8NGF8 309 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 OR51S1Q8NGJ8 323 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 BCL7BQ9BQE9 202 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 SLC35B3Q9H1N7 401 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 RSL24D1Q9UHA3 163 aaKnown RBP11.78□□□□□ -0.52
VARS-216ENST00000428445 NACAE9PAV3 2078 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 HSPG2P98160 4391 aa11.78□□□□□ -0.52
VARS-216ENST00000428445 FABP1P07148 127 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 SMIM18P0DKX4 95 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 ANXA3P12429 323 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 ID1P41134 155 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 SRPXP78539 464 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 ZNF90Q03938 601 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 IL18Q14116 193 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 SMCO1Q147U7 214 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 CLVS1Q8IUQ0 354 aaPredicted RBP11.77□□□□□ -0.53
VARS-216ENST00000428445 LGI3Q8N145 548 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 ZNF709Q8N972 641 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 DTD1Q8TEA8 209 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 RNF125Q96EQ8 232 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 MRPS26Q9BYN8 205 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms