RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 SLC25A2Q9BXI2 301 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 MRPL18Q9H0U6 180 aaKnown RBP12.54□□□□□ -0.4
TVP23C-203ENST00000428082 LPAR2Q9HBW0 351 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 BAHCC1Q9P281 2608 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 ZNF705GA8MUZ8 300 aaPredicted RBP12.54□□□□□ -0.4
TVP23C-203ENST00000428082 GGTLC3B5MD39 225 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 RNF223E7ERA6 249 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 CORTO00230 105 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 SLC17A3O00476 420 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 LIPFP07098 398 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 RANP62826 216 aaKnown RBP12.54□□□□□ -0.4
TVP23C-203ENST00000428082 PAX2Q02962 417 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 MLANAQ16655 118 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 MAPK1IP1LQ8NDC0 245 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 FAM167A-AS1Q96KT0 104 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 CDC42EP3Q9UKI2 254 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 WNK2Q9Y3S1 2297 aa12.54□□□□□ -0.4
TVP23C-203ENST00000428082 CR1P17927 2039 aa12.53□□□□□ -0.4
TVP23C-203ENST00000428082 ESDP10768 282 aa12.53□□□□□ -0.4
TVP23C-203ENST00000428082 CRISP2P16562 243 aa12.53□□□□□ -0.4
TVP23C-203ENST00000428082 COMPP49747 757 aaPredicted RBP12.53□□□□□ -0.4
TVP23C-203ENST00000428082 TPPP2P59282 170 aa12.53□□□□□ -0.4
TVP23C-203ENST00000428082 WFDC11Q8NEX6 87 aa12.53□□□□□ -0.4
TVP23C-203ENST00000428082 OR5AU1Q8NGC0 362 aa12.53□□□□□ -0.4
TVP23C-203ENST00000428082 CMTM2Q8TAZ6 248 aa12.53□□□□□ -0.4
TVP23C-203ENST00000428082 FOXC2Q99958 501 aa12.53□□□□□ -0.4
TVP23C-203ENST00000428082 CHRDL1Q9BU40 450 aa12.53□□□□□ -0.4
TVP23C-203ENST00000428082 PAXXQ9BUH6 204 aa12.53□□□□□ -0.4
TVP23C-203ENST00000428082 ONECUT1Q9UBC0 465 aa12.53□□□□□ -0.4
TVP23C-203ENST00000428082 FCN1O00602 326 aa12.52□□□□□ -0.4
TVP23C-203ENST00000428082 RBP4P02753 201 aa12.52□□□□□ -0.4
TVP23C-203ENST00000428082 CX3CL1P78423 397 aa12.52□□□□□ -0.4
TVP23C-203ENST00000428082 LBHQ53QV2 105 aaPredicted RBP12.52□□□□□ -0.4
TVP23C-203ENST00000428082 PVRIGQ6DKI7 326 aa12.52□□□□□ -0.4
TVP23C-203ENST00000428082 NPIPB3Q92617 1050 aa12.52□□□□□ -0.4
TVP23C-203ENST00000428082 CGB1A6NKQ9 187 aa12.52□□□□□ -0.41
TVP23C-203ENST00000428082 SLC25A17O43808 307 aa12.52□□□□□ -0.41
TVP23C-203ENST00000428082 CBLN1P23435 193 aa12.52□□□□□ -0.41
TVP23C-203ENST00000428082 DLX1P56177 255 aa12.52□□□□□ -0.41
TVP23C-203ENST00000428082 ARF6P62330 175 aa12.52□□□□□ -0.41
TVP23C-203ENST00000428082 Q0VG73 95 aa12.52□□□□□ -0.41
TVP23C-203ENST00000428082 C14orf144Q96I85 54 aa12.52□□□□□ -0.41
TVP23C-203ENST00000428082 IGF2BP2-AS1Q96M15 143 aa12.52□□□□□ -0.41
TVP23C-203ENST00000428082 ZNF355PQ9NSJ1 428 aa12.52□□□□□ -0.41
TVP23C-203ENST00000428082 POLR3KQ9Y2Y1 108 aaPredicted RBP12.52□□□□□ -0.41
TVP23C-203ENST00000428082 IGHV2-70DA0A0C4DH43 119 aa12.51□□□□□ -0.41
TVP23C-203ENST00000428082 ENSAO43768 121 aaKnown RBP12.51□□□□□ -0.41
TVP23C-203ENST00000428082 LOXL1Q08397 574 aaPredicted RBP12.51□□□□□ -0.41
TVP23C-203ENST00000428082 OR5I1Q13606 314 aa12.51□□□□□ -0.41
TVP23C-203ENST00000428082 IBA57Q5T440 356 aaKnown RBP12.51□□□□□ -0.41
TVP23C-203ENST00000428082 OR8I2Q8N0Y5 310 aa12.51□□□□□ -0.41
TVP23C-203ENST00000428082 MS4A10Q96PG2 267 aa12.51□□□□□ -0.41
TVP23C-203ENST00000428082 TRGV9Q99603 122 aa12.51□□□□□ -0.41
TVP23C-203ENST00000428082 PRO1933Q9H354 126 aa12.51□□□□□ -0.41
TVP23C-203ENST00000428082 FNDC4Q9H6D8 234 aaPredicted RBP12.51□□□□□ -0.41
TVP23C-203ENST00000428082 AMMECR1Q9Y4X0 333 aaPredicted RBP12.51□□□□□ -0.41
TVP23C-203ENST00000428082 A0A1W2PPI3 338 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 SNURFLB1AK76 121 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 E7EUB6 86 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 IER3P46695 156 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 RPL27AP46776 148 aaKnown RBP12.5□□□□□ -0.41
TVP23C-203ENST00000428082 PRB3Q04118 309 aaPredicted RBP12.5□□□□□ -0.41
TVP23C-203ENST00000428082 DIAPH2-AS1Q14236 149 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 PRSS8Q16651 343 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 BEND2Q8NDZ0 799 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 FLNBO75369 2602 aaKnown RBP12.5□□□□□ -0.41
TVP23C-203ENST00000428082 ITPR3Q14573 2671 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 CRYGCP07315 174 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 NOTCH2Q04721 2471 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 RASL11AQ6T310 242 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 FAM231DQ6ZW35 169 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 TMEM190Q8WZ59 177 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 SMIM12Q96EX1 92 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 RNF5Q99942 180 aa12.5□□□□□ -0.41
TVP23C-203ENST00000428082 AKAP9Q99996 3911 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 IGKV1D-37A0A075B6S9 117 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 SMIM27A0A1W2PRY6 76 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 A8MWP6 167 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 SCGB1D1O95968 90 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 HLA-DQA1P01909 254 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 MGST1P10620 155 aaKnown RBP12.49□□□□□ -0.41
TVP23C-203ENST00000428082 C10orf55Q5SWW7 151 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 TMEM256Q8N2U0 113 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 ZNF664Q8N3J9 261 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 CLEC7AQ9BXN2 247 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 TNFRSF19Q9NS68 423 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 INSIG2Q9Y5U4 225 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 ZNF469Q96JG9 3925 aaPredicted RBP12.49□□□□□ -0.41
TVP23C-203ENST00000428082 IGHV2-26A0A0B4J1V2 119 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 TRAV5A0A0B4J249 113 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 M0R1W7 72 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 IGLV2-8P01709 118 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 AMY1AP04745 511 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 RAB4BP61018 213 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 ZNF329Q86UD4 541 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 BAGE3Q86Y29 109 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 BAGE2Q86Y30 109 aa12.49□□□□□ -0.41
TVP23C-203ENST00000428082 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.48□□□□□ -0.41
TVP23C-203ENST00000428082 IGLC7A0M8Q6 106 aa12.48□□□□□ -0.41
TVP23C-203ENST00000428082 B4DSR2 109 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms