RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RNF2Q99496 336 aa6.81□□□□□ -1.32
SMC1A-203ENST00000428014 GGTLC1Q9BX51 225 aa6.81□□□□□ -1.32
SMC1A-203ENST00000428014 C20orf85Q9H1P6 137 aa6.81□□□□□ -1.32
SMC1A-203ENST00000428014 FBXL17Q9UF56 701 aa6.81□□□□□ -1.32
SMC1A-203ENST00000428014 BUB3O43684 328 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 PRAF2O60831 178 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 HNRNPCP07910 306 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMC1A-203ENST00000428014 H2AFB1P0C5Y9 115 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 H2AFB2P0C5Z0 115 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 RD3LP0DJH9 198 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 SELENOTP62341 195 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 GAMTQ14353 236 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 RGS21Q2M5E4 152 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 ODF3L2Q3SX64 289 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 SPINK9Q5DT21 86 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 C11orf87Q6NUJ2 197 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 TMEM144Q7Z5S9 345 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 ENKURQ8TC29 256 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 ZNF431Q8TF32 576 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-203ENST00000428014 SRD5A3Q9H8P0 318 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 EDA2RQ9HAV5 297 aa6.8□□□□□ -1.32
SMC1A-203ENST00000428014 MRPL36Q9P0J6 103 aaKnown RBP6.8□□□□□ -1.32
SMC1A-203ENST00000428014 STRAPQ9Y3F4 350 aaKnown RBP6.8□□□□□ -1.32
SMC1A-203ENST00000428014 IGHV3-21A0A0B4J1V1 117 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 IGHV3-35A0A0C4DH35 117 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 LINC00854A0A1B0GVQ3 168 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 FAM240BA0A1B0GVZ2 78 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 RBMY1BA6NDE4 496 aaKnown RBP6.79□□□□□ -1.32
SMC1A-203ENST00000428014 RBMY1EA6NEQ0 496 aaKnown RBP6.79□□□□□ -1.32
SMC1A-203ENST00000428014 SNRPGP15A8MWD9 76 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 RBMY1DP0C7P1 496 aaKnown RBP6.79□□□□□ -1.32
SMC1A-203ENST00000428014 PLP1P60201 277 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 DLK1P80370 383 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 PXDC1Q5TGL8 231 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 C16orf54Q6UWD8 224 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 TMEM14EPQ6UXP3 125 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 GLMPQ8WWB7 406 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 NPIPB3Q92617 1050 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 RNF125Q96EQ8 232 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 CLUHP3Q96NS8 147 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 GPR82Q96P67 336 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 NBEAL2Q6ZNJ1 2754 aa6.79□□□□□ -1.32
SMC1A-203ENST00000428014 IGKV1D-37A0A075B6S9 117 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 K7EQG2 157 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 WRBO00258 174 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 NXPH3O95157 252 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 HOXB5P09067 269 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 PSG1P11464 419 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 EDN2P20800 178 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 P2RY1P47900 373 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 MEOX2P50222 304 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 IL15RAQ13261 267 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 SPATA31B1PQ5VZV4 182 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 TCF24Q7RTU0 167 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 DEFB125Q8N687 156 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 STPG3Q8N7X2 389 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 MUC7Q8TAX7 377 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 DCANP1Q8TF63 244 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 GATAD1Q8WUU5 269 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 CHAC2Q8WUX2 184 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 ST8SIA2Q92186 375 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 NUDT15Q9NV35 164 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 PRR13Q9NZ81 148 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 RABAC1Q9UI14 185 aa6.78□□□□□ -1.32
SMC1A-203ENST00000428014 ZFP92A6NM28 416 aa6.77□□□□□ -1.33
SMC1A-203ENST00000428014 PMS2P5A8MQ11 134 aa6.77□□□□□ -1.33
SMC1A-203ENST00000428014 IL4P05112 153 aa6.77□□□□□ -1.33
SMC1A-203ENST00000428014 ANXA7P20073 488 aaKnown RBP6.77□□□□□ -1.33
SMC1A-203ENST00000428014 USF2Q15853 346 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-203ENST00000428014 MLANAQ16655 118 aa6.77□□□□□ -1.33
SMC1A-203ENST00000428014 IAH1Q2TAA2 248 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-203ENST00000428014 TIGITQ495A1 244 aa6.77□□□□□ -1.33
SMC1A-203ENST00000428014 NRARPQ7Z6K4 114 aa6.77□□□□□ -1.33
SMC1A-203ENST00000428014 ZBTB8BQ8NAP8 495 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-203ENST00000428014 MARVELD1Q9BSK0 173 aa6.77□□□□□ -1.33
SMC1A-203ENST00000428014 MS4A6AQ9H2W1 248 aa6.77□□□□□ -1.33
SMC1A-203ENST00000428014 MAP6D1Q9H9H5 199 aa6.77□□□□□ -1.33
SMC1A-203ENST00000428014 GPN1Q9HCN4 374 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-203ENST00000428014 FLVCR2Q9UPI3 526 aa6.77□□□□□ -1.33
SMC1A-203ENST00000428014 DNASE2O00115 360 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-203ENST00000428014 DEDDO75618 318 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 ADAP1O75689 374 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 IGHV3-48P01763 117 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 SPP1P10451 314 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 CYCSP99999 105 aaKnown RBP6.76□□□□□ -1.33
SMC1A-203ENST00000428014 OXA1LQ15070 435 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 MORN3Q6PF18 240 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-203ENST00000428014 C12orf45Q8N5I9 185 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-203ENST00000428014 BPIFCQ8NFQ6 507 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 OR10P1Q8NGE3 313 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 ACY3Q96HD9 319 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 C2orf50Q96LR7 162 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 ASCL2Q99929 193 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 NPVFQ9HCQ7 196 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 NRN1Q9NPD7 142 aa6.76□□□□□ -1.33
SMC1A-203ENST00000428014 HUWE1Q7Z6Z7 4374 aaKnown RBP6.75□□□□□ -1.33
SMC1A-203ENST00000428014 IGKV1OR2-108A0A075B7D4 117 aa6.75□□□□□ -1.33
SMC1A-203ENST00000428014 PVALBP20472 110 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-203ENST00000428014 PAX9P55771 341 aa6.75□□□□□ -1.33
SMC1A-203ENST00000428014 SNRPD3P62318 126 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms