RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 DHRS2Q13268 280 aa16.71■□□□□ 0.27
SEMA3C-204ENST00000427167 GGNBP1Q5YKI7 109 aa16.71■□□□□ 0.27
SEMA3C-204ENST00000427167 STHQ8IWL8 128 aa16.71■□□□□ 0.27
SEMA3C-204ENST00000427167 DCANP1Q8TF63 244 aa16.71■□□□□ 0.27
SEMA3C-204ENST00000427167 SDHCQ99643 169 aaPredicted RBP16.71■□□□□ 0.27
SEMA3C-204ENST00000427167 C9orf170A2RU37 121 aa16.7■□□□□ 0.26
SEMA3C-204ENST00000427167 WRBO00258 174 aa16.7■□□□□ 0.26
SEMA3C-204ENST00000427167 GPX4P36969 197 aaPredicted RBP16.7■□□□□ 0.26
SEMA3C-204ENST00000427167 UBE2MP61081 183 aaKnown RBP16.7■□□□□ 0.26
SEMA3C-204ENST00000427167 ZNF90Q03938 601 aa16.7■□□□□ 0.26
SEMA3C-204ENST00000427167 RNF125Q96EQ8 232 aa16.7■□□□□ 0.26
SEMA3C-204ENST00000427167 KNCNA6PVL3 124 aa16.69■□□□□ 0.26
SEMA3C-204ENST00000427167 SYNGR2O43760 224 aa16.69■□□□□ 0.26
SEMA3C-204ENST00000427167 ADAP1O75689 374 aa16.69■□□□□ 0.26
SEMA3C-204ENST00000427167 JTBO76095 146 aa16.69■□□□□ 0.26
SEMA3C-204ENST00000427167 GATAD1Q8WUU5 269 aa16.69■□□□□ 0.26
SEMA3C-204ENST00000427167 CIB3Q96Q77 187 aaPredicted RBP16.69■□□□□ 0.26
SEMA3C-204ENST00000427167 RARRES2Q99969 163 aa16.69■□□□□ 0.26
SEMA3C-204ENST00000427167 IGKV1D-37A0A075B6S9 117 aa16.68■□□□□ 0.26
SEMA3C-204ENST00000427167 CENPXA8MT69 81 aa16.68■□□□□ 0.26
SEMA3C-204ENST00000427167 IL7P13232 177 aa16.68■□□□□ 0.26
SEMA3C-204ENST00000427167 AP2S1P53680 142 aaPredicted RBP16.68■□□□□ 0.26
SEMA3C-204ENST00000427167 BUB3O43684 328 aa16.67■□□□□ 0.26
SEMA3C-204ENST00000427167 ANXA7P20073 488 aaKnown RBP16.67■□□□□ 0.26
SEMA3C-204ENST00000427167 LYZP61626 148 aa16.67■□□□□ 0.26
SEMA3C-204ENST00000427167 RPP30P78346 268 aaKnown RBP16.67■□□□□ 0.26
SEMA3C-204ENST00000427167 OR2F1Q13607 317 aa16.67■□□□□ 0.26
SEMA3C-204ENST00000427167 PSMG4Q5JS54 123 aa16.67■□□□□ 0.26
SEMA3C-204ENST00000427167 SIGLEC15Q6ZMC9 328 aa16.67■□□□□ 0.26
SEMA3C-204ENST00000427167 OR11H2Q8NH07 326 aa16.67■□□□□ 0.26
SEMA3C-204ENST00000427167 COQ8AQ8NI60 647 aa16.67■□□□□ 0.26
SEMA3C-204ENST00000427167 H3BP45 60 aa16.66■□□□□ 0.26
SEMA3C-204ENST00000427167 OR4E1P0C645 316 aa16.66■□□□□ 0.26
SEMA3C-204ENST00000427167 BTCP35070 178 aa16.66■□□□□ 0.26
SEMA3C-204ENST00000427167 C4orf46Q504U0 113 aa16.66■□□□□ 0.26
SEMA3C-204ENST00000427167 ACTL10Q5JWF8 245 aa16.66■□□□□ 0.26
SEMA3C-204ENST00000427167 SPANXN5Q5MJ07 72 aa16.66■□□□□ 0.26
SEMA3C-204ENST00000427167 TMEM217Q8N7C4 229 aa16.66■□□□□ 0.26
SEMA3C-204ENST00000427167 FABP1P07148 127 aa16.65■□□□□ 0.26
SEMA3C-204ENST00000427167 TRPT1Q86TN4 253 aaKnown RBP16.65■□□□□ 0.26
SEMA3C-204ENST00000427167 NRN1Q9NPD7 142 aa16.65■□□□□ 0.26
SEMA3C-204ENST00000427167 AGRNO00468 2067 aa16.65■□□□□ 0.26
SEMA3C-204ENST00000427167 OR8G2PQ6IF36 304 aa16.64■□□□□ 0.25
SEMA3C-204ENST00000427167 C7orf50Q9BRJ6 194 aaKnown RBP16.64■□□□□ 0.25
SEMA3C-204ENST00000427167 NDUFA13Q9P0J0 144 aa16.64■□□□□ 0.25
SEMA3C-204ENST00000427167 PFDN2Q9UHV9 154 aa16.64■□□□□ 0.25
SEMA3C-204ENST00000427167 SNRPGP15A8MWD9 76 aa16.63■□□□□ 0.25
SEMA3C-204ENST00000427167 IFNA21P01568 189 aa16.63■□□□□ 0.25
SEMA3C-204ENST00000427167 NUP62P37198 522 aaPredicted RBP16.63■□□□□ 0.25
SEMA3C-204ENST00000427167 SNRPD3P62318 126 aaKnown RBP16.63■□□□□ 0.25
SEMA3C-204ENST00000427167 POLR2GP62487 172 aaKnown RBP eCLIP16.63■□□□□ 0.25
SEMA3C-204ENST00000427167 PPP1R14BQ96C90 147 aa16.63■□□□□ 0.25
SEMA3C-204ENST00000427167 TRGV9Q99603 122 aa16.63■□□□□ 0.25
SEMA3C-204ENST00000427167 STRAPQ9Y3F4 350 aaKnown RBP16.63■□□□□ 0.25
SEMA3C-204ENST00000427167 IGKV1OR2-108A0A075B7D4 117 aa16.62■□□□□ 0.25
SEMA3C-204ENST00000427167 NUPR2A6NF83 97 aa16.62■□□□□ 0.25
SEMA3C-204ENST00000427167 RAB40CQ96S21 281 aa16.62■□□□□ 0.25
SEMA3C-204ENST00000427167 DNAH1Q9P2D7 4330 aa16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 PRSS46E5RG02 174 aa16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 DEFB4AO15263 64 aa16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 SSSCA1O60232 199 aa16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 SPP1P10451 314 aa16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 ATF4P18848 351 aaPredicted RBP16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 C4BPBP20851 252 aa16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 NKX2-1P43699 371 aaPredicted RBP16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 AKR1C1Q04828 323 aa16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 MORN3Q6PF18 240 aaPredicted RBP16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 THAP8Q8NA92 274 aa16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 HYDINQ4G0P3 5121 aa16.61■□□□□ 0.25
SEMA3C-204ENST00000427167 SCGB1D2O95969 90 aa16.6■□□□□ 0.25
SEMA3C-204ENST00000427167 GIG44P09565 113 aaPredicted RBP16.6■□□□□ 0.25
SEMA3C-204ENST00000427167 ID3Q02535 119 aa16.6■□□□□ 0.25
SEMA3C-204ENST00000427167 CEMP1Q6PRD7 247 aaPredicted RBP16.6■□□□□ 0.25
SEMA3C-204ENST00000427167 ACOT7LQ6ZUV0 252 aa16.6■□□□□ 0.25
SEMA3C-204ENST00000427167 OR4D5Q8NGN0 318 aa16.6■□□□□ 0.25
SEMA3C-204ENST00000427167 PSENENQ9NZ42 101 aa16.6■□□□□ 0.25
SEMA3C-204ENST00000427167 ALMS1Q8TCU4 4167 aa16.6■□□□□ 0.25
SEMA3C-204ENST00000427167 SMCO3A2RU48 225 aa16.59■□□□□ 0.25
SEMA3C-204ENST00000427167 PLA2G10O15496 165 aa16.59■□□□□ 0.25
SEMA3C-204ENST00000427167 C20orf85Q9H1P6 137 aa16.59■□□□□ 0.25
SEMA3C-204ENST00000427167 C11orf68Q9H3H3 251 aaKnown RBP16.59■□□□□ 0.25
SEMA3C-204ENST00000427167 CLEC5AQ9NY25 188 aa16.59■□□□□ 0.25
SEMA3C-204ENST00000427167 LYRM1O43325 122 aa16.58■□□□□ 0.24
SEMA3C-204ENST00000427167 GSG1LQ6UXU4 331 aa16.58■□□□□ 0.24
SEMA3C-204ENST00000427167 FBXL17Q9UF56 701 aa16.58■□□□□ 0.24
SEMA3C-204ENST00000427167 PLECQ15149 4684 aaKnown RBP16.58■□□□□ 0.24
SEMA3C-204ENST00000427167 GATA2P23769 480 aaPredicted RBP16.57■□□□□ 0.24
SEMA3C-204ENST00000427167 NANOS2P60321 138 aaKnown RBP16.57■□□□□ 0.24
SEMA3C-204ENST00000427167 IAH1Q2TAA2 248 aaPredicted RBP16.57■□□□□ 0.24
SEMA3C-204ENST00000427167 TMEM41BQ5BJD5 291 aa16.57■□□□□ 0.24
SEMA3C-204ENST00000427167 C1orf194Q5T5A4 169 aa16.57■□□□□ 0.24
SEMA3C-204ENST00000427167 OR8I2Q8N0Y5 310 aa16.57■□□□□ 0.24
SEMA3C-204ENST00000427167 C11orf45Q8TAV5 145 aa16.57■□□□□ 0.24
SEMA3C-204ENST00000427167 PHLDA1Q8WV24 401 aaPredicted RBP16.57■□□□□ 0.24
SEMA3C-204ENST00000427167 LINC00052Q96N35 136 aa16.57■□□□□ 0.24
SEMA3C-204ENST00000427167 WDR12Q9GZL7 423 aaKnown RBP16.57■□□□□ 0.24
SEMA3C-204ENST00000427167 GSKIPQ9P0R6 139 aa16.57■□□□□ 0.24
SEMA3C-204ENST00000427167 MITD1Q8WV92 249 aa16.56■□□□□ 0.24
SEMA3C-204ENST00000427167 SLC25A22Q9H936 323 aa16.56■□□□□ 0.24
SEMA3C-204ENST00000427167 SEPSECSQ9HD40 501 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms