RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 RHOGP84095 191 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 MEF2BQ02080 365 aaPredicted RBP13.57□□□□□ -0.24
FN1-208ENST00000426059 C15orf32Q32M92 178 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 CST9LP1Q5W188 147 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 SVBPQ8N300 66 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 DUX5Q96PT3 197 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 C21orf62Q9NYP8 219 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 THYN1Q9P016 225 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 CUBNO60494 3623 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 ATP5G3P48201 142 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 LYZP61626 148 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 LINC00305Q7Z4B0 112 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 CLRN3Q8NCR9 226 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 OR4F5Q8NH21 305 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 OR4F4Q96R69 305 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 SMDT1Q9H4I9 107 aa13.57□□□□□ -0.24
FN1-208ENST00000426059 DNASE2O00115 360 aaPredicted RBP13.56□□□□□ -0.24
FN1-208ENST00000426059 MFAP4P55083 255 aa13.56□□□□□ -0.24
FN1-208ENST00000426059 TMEM95Q3KNT9 176 aa13.56□□□□□ -0.24
FN1-208ENST00000426059 LEMD1Q68G75 181 aa13.56□□□□□ -0.24
FN1-208ENST00000426059 SLC25A2Q9BXI2 301 aa13.56□□□□□ -0.24
FN1-208ENST00000426059 MANBALQ9NQG1 85 aa13.56□□□□□ -0.24
FN1-208ENST00000426059 PUS1Q9Y606 427 aaKnown RBP eCLIP13.56□□□□□ -0.24
FN1-208ENST00000426059 IGHV3-35A0A0C4DH35 117 aa13.56□□□□□ -0.24
FN1-208ENST00000426059 RD3LP0DJH9 198 aa13.56□□□□□ -0.24
FN1-208ENST00000426059 NKX6-2Q9C056 277 aaPredicted RBP13.56□□□□□ -0.24
FN1-208ENST00000426059 TECRQ9NZ01 308 aaKnown RBP13.56□□□□□ -0.24
FN1-208ENST00000426059 C11orf94C9JXX5 98 aa13.55□□□□□ -0.24
FN1-208ENST00000426059 IGHG2P01859 326 aa13.55□□□□□ -0.24
FN1-208ENST00000426059 PYYP10082 97 aa13.55□□□□□ -0.24
FN1-208ENST00000426059 PMS2P11Q13670 270 aa13.55□□□□□ -0.24
FN1-208ENST00000426059 OR5AU1Q8NGC0 362 aa13.55□□□□□ -0.24
FN1-208ENST00000426059 OR1L4Q8NGR5 311 aa13.55□□□□□ -0.24
FN1-208ENST00000426059 FAM167A-AS1Q96KT0 104 aa13.55□□□□□ -0.24
FN1-208ENST00000426059 PFDN5Q99471 154 aa13.55□□□□□ -0.24
FN1-208ENST00000426059 C19orf24Q9BVV8 132 aa13.55□□□□□ -0.24
FN1-208ENST00000426059 YTHDF2Q9Y5A9 579 aaKnown RBP13.55□□□□□ -0.24
FN1-208ENST00000426059 HOXA3O43365 443 aaPredicted RBP13.54□□□□□ -0.24
FN1-208ENST00000426059 C8orf88P0DMB2 117 aa13.54□□□□□ -0.24
FN1-208ENST00000426059 AKR1C3P42330 323 aa13.54□□□□□ -0.24
FN1-208ENST00000426059 FAM90A2PQ658T7 463 aa13.54□□□□□ -0.24
FN1-208ENST00000426059 Q6YL49 198 aa13.54□□□□□ -0.24
FN1-208ENST00000426059 OR51G1Q8NGK1 321 aa13.54□□□□□ -0.24
FN1-208ENST00000426059 TRBV9A0A0B4J1U6 114 aa13.54□□□□□ -0.24
FN1-208ENST00000426059 C19orf54Q5BKX5 351 aa13.54□□□□□ -0.24
FN1-208ENST00000426059 C9orf139Q6ZV77 190 aa13.54□□□□□ -0.24
FN1-208ENST00000426059 CHRDL1Q9BU40 450 aa13.54□□□□□ -0.24
FN1-208ENST00000426059 M0QZK8 103 aa13.53□□□□□ -0.24
FN1-208ENST00000426059 HYPMO75409 117 aa13.53□□□□□ -0.24
FN1-208ENST00000426059 FLI1Q01543 452 aaPredicted RBP13.53□□□□□ -0.24
FN1-208ENST00000426059 KRTAP1-1Q07627 177 aa13.53□□□□□ -0.24
FN1-208ENST00000426059 C16orf82Q7Z2V1 217 aa13.53□□□□□ -0.24
FN1-208ENST00000426059 IGHV3OR16-8A0A075B7F1 116 aa13.53□□□□□ -0.24
FN1-208ENST00000426059 GPR183P32249 361 aa13.53□□□□□ -0.24
FN1-208ENST00000426059 ZNF674Q2M3X9 581 aa13.53□□□□□ -0.24
FN1-208ENST00000426059 LCNL1Q6ZST4 164 aa13.53□□□□□ -0.24
FN1-208ENST00000426059 RPUSD4Q96CM3 377 aaKnown RBP13.53□□□□□ -0.24
FN1-208ENST00000426059 MRPL32Q9BYC8 188 aaKnown RBP13.53□□□□□ -0.24
FN1-208ENST00000426059 SAV1Q9H4B6 383 aaPredicted RBP13.53□□□□□ -0.24
FN1-208ENST00000426059 ELOA3CA0A087WX78 387 aaPredicted RBP13.52□□□□□ -0.24
FN1-208ENST00000426059 M0R036 132 aa13.52□□□□□ -0.24
FN1-208ENST00000426059 SNAPINO95295 136 aa13.52□□□□□ -0.24
FN1-208ENST00000426059 IGF1P05019 195 aa13.52□□□□□ -0.24
FN1-208ENST00000426059 IL4P05112 153 aa13.52□□□□□ -0.24
FN1-208ENST00000426059 CTSGP08311 255 aa13.52□□□□□ -0.24
FN1-208ENST00000426059 HIST1H1BP16401 226 aaKnown RBP13.52□□□□□ -0.24
FN1-208ENST00000426059 TAS2R45P59539 299 aa13.52□□□□□ -0.24
FN1-208ENST00000426059 TMEM88Q6PEY1 159 aa13.52□□□□□ -0.24
FN1-208ENST00000426059 TMEM68Q96MH6 324 aa13.52□□□□□ -0.24
FN1-208ENST00000426059 FAM74A7A6NL05 159 aa13.52□□□□□ -0.25
FN1-208ENST00000426059 NPPCP23582 126 aa13.52□□□□□ -0.25
FN1-208ENST00000426059 FAM74A3Q4VXF1 159 aa13.52□□□□□ -0.25
FN1-208ENST00000426059 H3BQ15 152 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 CLEC3BP05452 202 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 ADMP35318 185 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 CLEC19AQ6UXS0 136 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 PQLC2Q6ZP29 291 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 ZNF491Q8N8L2 437 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 NECAP1Q8NC96 275 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 ZNF502Q8TBZ5 544 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 CCDC140Q96MF4 163 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 VPREB3Q9UKI3 123 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 TOMM40O96008 361 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 PPIFP30405 207 aaKnown RBP13.51□□□□□ -0.25
FN1-208ENST00000426059 CRIP2P52943 208 aaPredicted RBP13.51□□□□□ -0.25
FN1-208ENST00000426059 AWAT1Q58HT5 328 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 ZNF329Q86UD4 541 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 SIGLECL1Q8N7X8 197 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 RNF2Q99496 336 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 KLK15Q9H2R5 256 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 HIGD1AQ9Y241 93 aa13.51□□□□□ -0.25
FN1-208ENST00000426059 TRGV3P03979 118 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 PLP1P60201 277 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 UBE2L3P68036 154 aaKnown RBP13.5□□□□□ -0.25
FN1-208ENST00000426059 OR5R1Q8NH85 324 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 VN1R17PQ8TDU5 208 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 RNF125Q96EQ8 232 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 PAXXQ9BUH6 204 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 DERL1Q9BUN8 251 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 TRAV30A0A087WSZ9 112 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms