RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 PRR20CP86479 221 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 PRR20DP86480 221 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 PRR20BP86481 221 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 PRR20AP86496 221 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 TMEM30BQ3MIR4 351 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 NABP2Q9BQ15 211 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 HSPB9Q9BQS6 159 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 GEMIN7Q9H840 131 aaKnown RBP10.53□□□□□ -0.72
COL12A1-205ENST00000425443 MALRD1Q5VYJ5 2156 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 ZZEF1O43149 2961 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 TRAV5A0A0B4J249 113 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 OR2T8A6NH00 312 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 FCN1O00602 326 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-205ENST00000425443 PRB4P10163 310 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-205ENST00000425443 DIAPH2-AS1Q14236 149 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 PRR30Q53SZ7 412 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-205ENST00000425443 OR2T6Q8NHC8 308 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 DPF1Q92782 380 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 SGK494Q96LW2 274 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 UHRF2Q96PU4 802 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 SPXQ9BT56 116 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 SAMD10Q9BYL1 202 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 TMEM106BQ9NUM4 274 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 IGHV3-72A0A0B4J1Y9 119 aa10.52□□□□□ -0.72
COL12A1-205ENST00000425443 REG1AP05451 166 aa10.52□□□□□ -0.72
COL12A1-205ENST00000425443 THBDP07204 575 aa10.52□□□□□ -0.72
COL12A1-205ENST00000425443 PAFAH1B2P68402 229 aa10.52□□□□□ -0.72
COL12A1-205ENST00000425443 PRCDQ00LT1 54 aa10.52□□□□□ -0.72
COL12A1-205ENST00000425443 MEF2CQ06413 473 aaPredicted RBP10.52□□□□□ -0.72
COL12A1-205ENST00000425443 FLYWCH2Q96CP2 140 aaKnown RBP10.52□□□□□ -0.72
COL12A1-205ENST00000425443 BTF3L4Q96K17 158 aa10.52□□□□□ -0.72
COL12A1-205ENST00000425443 COL6A6A6NMZ7 2263 aa10.52□□□□□ -0.73
COL12A1-205ENST00000425443 NBL1P41271 181 aa10.52□□□□□ -0.73
COL12A1-205ENST00000425443 CENPWQ5EE01 88 aa10.52□□□□□ -0.73
COL12A1-205ENST00000425443 MORN5Q5VZ52 161 aa10.52□□□□□ -0.73
COL12A1-205ENST00000425443 TMEM200BQ69YZ2 307 aa10.52□□□□□ -0.73
COL12A1-205ENST00000425443 BAGE3Q86Y29 109 aa10.52□□□□□ -0.73
COL12A1-205ENST00000425443 BAGE2Q86Y30 109 aa10.52□□□□□ -0.73
COL12A1-205ENST00000425443 IGHV3-21A0A0B4J1V1 117 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 TEX50A0A1B0GTY4 177 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 SNURFLB1AK76 121 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 G3V4G9 280 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 TMEM178BH3BS89 294 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 SPACA3Q8IXA5 215 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 MMD2Q8IY49 270 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 LINC00479Q96M42 142 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 ZNF257Q9Y2Q1 563 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 WNK2Q9Y3S1 2297 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 IGF2RP11717 2491 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 CRISP2P16562 243 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 GNG4P50150 75 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 ERHP84090 104 aaKnown RBP10.51□□□□□ -0.73
COL12A1-205ENST00000425443 MRPL54Q6P161 138 aaKnown RBP10.51□□□□□ -0.73
COL12A1-205ENST00000425443 LYPD2Q6UXB3 125 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 NEUROG1Q92886 237 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 C11orf52Q96A22 123 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 RCHY1Q96PM5 261 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 GGTLC3B5MD39 225 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 ENSAO43768 121 aaKnown RBP10.51□□□□□ -0.73
COL12A1-205ENST00000425443 SSBP2P81877 361 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-205ENST00000425443 Q8NA96 180 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 FER1L6-AS1Q8NA97 138 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 OSR1Q8TAX0 266 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-205ENST00000425443 TXNDC17Q9BRA2 123 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 TP73-AS1Q9UF72 201 aa10.51□□□□□ -0.73
COL12A1-205ENST00000425443 HELTA6NFD8 242 aa10.5□□□□□ -0.73
COL12A1-205ENST00000425443 E7EUB6 86 aa10.5□□□□□ -0.73
COL12A1-205ENST00000425443 POU2AF1Q16633 256 aa10.5□□□□□ -0.73
COL12A1-205ENST00000425443 SPATA45Q537H7 98 aa10.5□□□□□ -0.73
COL12A1-205ENST00000425443 OR5B3Q8NH48 314 aa10.5□□□□□ -0.73
COL12A1-205ENST00000425443 RNASE6Q93091 150 aaKnown RBP10.5□□□□□ -0.73
COL12A1-205ENST00000425443 WNT10AQ9GZT5 417 aa10.5□□□□□ -0.73
COL12A1-205ENST00000425443 GNB4Q9HAV0 340 aa10.5□□□□□ -0.73
COL12A1-205ENST00000425443 FBXL7Q9UJT9 491 aa10.5□□□□□ -0.73
COL12A1-205ENST00000425443 PMCHP20382 165 aa10.5□□□□□ -0.73
COL12A1-205ENST00000425443 RPL8P62917 257 aaKnown RBP10.5□□□□□ -0.73
COL12A1-205ENST00000425443 C5orf17Q8NAS9 161 aa10.5□□□□□ -0.73
COL12A1-205ENST00000425443 SIGMAR1Q99720 223 aa10.5□□□□□ -0.73
COL12A1-205ENST00000425443 SSBP3Q9BWW4 388 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-205ENST00000425443 TOX4O94842 621 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 IGLV2-8P01709 118 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 FAM87AP0C7U9 286 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 PLP1P60201 277 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 TBR1Q16650 682 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 TEX43Q6ZNM6 134 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 C19orf35Q6ZS72 473 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 Q8N976 141 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 OR1B1Q8NGR6 318 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 SCNM1Q9BWG6 230 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 LINC00574Q9H8X3 128 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 YAE1D1Q9NRH1 226 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 C9JCJ5 164 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 ESDP10768 282 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 OR1L8Q8NGR8 309 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 NAT8BQ9UHF3 227 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 PYYP10082 97 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 RPEL1Q2QD12 228 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 CCDC144NLQ6NUI1 221 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 ZNF833PQ6ZTB9 187 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms