RNA–Protein interactions for RNA: ENST00000423575.5

LINC00539-202, long intergenic non-protein coding RNA 539, humanhuman

TSL 3 BASIC

Gene LINC00539, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-202ENST00000423575 K7EMT4 169 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 ARPC5O15511 151 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 SAP30O75446 220 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 IL4P05112 153 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 FABP1P07148 127 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 FOLR2P14207 255 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 GATA2P23769 480 aaPredicted RBP9.19□□□□□ -0.94
LINC00539-202ENST00000423575 NUP62P37198 522 aaPredicted RBP9.19□□□□□ -0.94
LINC00539-202ENST00000423575 ELLP55199 621 aaPredicted RBP9.19□□□□□ -0.94
LINC00539-202ENST00000423575 CD300CQ08708 224 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 USF2Q15853 346 aaPredicted RBP9.19□□□□□ -0.94
LINC00539-202ENST00000423575 OXLD1Q5BKU9 147 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 TEPPQ6URK8 271 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 BTNL8Q6UX41 500 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 CYP2G1PQ6ZSU1 146 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 OR51G1Q8NGK1 321 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 ATP5SQ99766 215 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 MCRIP2Q9BUT9 160 aaKnown RBP9.19□□□□□ -0.94
LINC00539-202ENST00000423575 ELOVL1Q9BW60 279 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 GGTLC1Q9BX51 225 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 NBEAL1Q6ZS30 2694 aa9.19□□□□□ -0.94
LINC00539-202ENST00000423575 IGHV3-49A0A0A0MS15 119 aa9.18□□□□□ -0.94
LINC00539-202ENST00000423575 WI2-2373I1.2A0A1W2PRP0 233 aa9.18□□□□□ -0.94
LINC00539-202ENST00000423575 AGPAT2O15120 278 aa9.18□□□□□ -0.94
LINC00539-202ENST00000423575 C8orf88P0DMB2 117 aa9.18□□□□□ -0.94
LINC00539-202ENST00000423575 FGF7P21781 194 aa9.18□□□□□ -0.94
LINC00539-202ENST00000423575 CBLN1P23435 193 aa9.18□□□□□ -0.94
LINC00539-202ENST00000423575 C9orf66Q5T8R8 295 aa9.18□□□□□ -0.94
LINC00539-202ENST00000423575 INO80EQ8NBZ0 244 aaPredicted RBP9.18□□□□□ -0.94
LINC00539-202ENST00000423575 RNF125Q96EQ8 232 aa9.18□□□□□ -0.94
LINC00539-202ENST00000423575 GINS3Q9BRX5 216 aa9.18□□□□□ -0.94
LINC00539-202ENST00000423575 SIGLEC8Q9NYZ4 499 aa9.18□□□□□ -0.94
LINC00539-202ENST00000423575 SLC45A2Q9UMX9 530 aa9.18□□□□□ -0.94
LINC00539-202ENST00000423575 G3V4G9 280 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 DFFBO76075 338 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 CAMLGP49069 296 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 AP2S1P53680 142 aaPredicted RBP9.17□□□□□ -0.94
LINC00539-202ENST00000423575 LYZP61626 148 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 OPCMLQ14982 345 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 BPIFCQ8NFQ6 507 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 MARC2Q969Z3 335 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 NEURL2Q9BR09 285 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 PBDC1Q9BVG4 233 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 WDR61Q9GZS3 305 aaKnown RBP9.17□□□□□ -0.94
LINC00539-202ENST00000423575 MFFQ9GZY8 342 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 SELENOKQ9Y6D0 94 aa9.17□□□□□ -0.94
LINC00539-202ENST00000423575 IGHV3OR16-13A0A075B7E8 117 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 IGHV3-74A0A0B4J1X5 117 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 IGHV7-4-1A0A0J9YVY3 117 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 HMSDA8MTL9 139 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 WIPF1O43516 503 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 MPDU1O75352 247 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 C1QBP02746 253 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
LINC00539-202ENST00000423575 LINC00869P0C866 280 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 CXCL2P19875 107 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 INSL3P51460 131 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 SELENOTP62341 195 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 MIC13Q5XKP0 118 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 DYNLRB2Q8TF09 96 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 METTL26Q96S19 204 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 NPCDR1Q9BY65 106 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 MRPL27Q9P0M9 148 aaKnown RBP9.16□□□□□ -0.94
LINC00539-202ENST00000423575 DOK5Q9P104 306 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 MLXQ9UH92 298 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 SMPXQ9UHP9 88 aa9.16□□□□□ -0.94
LINC00539-202ENST00000423575 IGHV3-66A0A0C4DH42 116 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 CFDP00746 253 aaPredicted RBP9.15□□□□□ -0.94
LINC00539-202ENST00000423575 IFNA5P01569 189 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 IGLV1-51P01701 117 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 HNRNPCP07910 306 aaKnown RBP eCLIP9.15□□□□□ -0.94
LINC00539-202ENST00000423575 NPPCP23582 126 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 CRYBB3P26998 211 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 PRR20EP86478 221 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 PRR20CP86479 221 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 PRR20DP86480 221 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 PRR20BP86481 221 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 PRR20AP86496 221 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 RAB31Q13636 194 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 ZNF345Q14585 488 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 DEFB114Q30KQ6 69 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 KCNRGQ8N5I3 272 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 STPG3Q8N7X2 389 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 ST8SIA2Q92186 375 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 RHPN1-AS1Q9BWJ2 59 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 PARD6GQ9BYG4 376 aaPredicted RBP9.15□□□□□ -0.94
LINC00539-202ENST00000423575 GPR61Q9BZJ8 451 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 RABAC1Q9UI14 185 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 U3KQE9 123 aa9.15□□□□□ -0.94
LINC00539-202ENST00000423575 CHEK1O14757 476 aa9.14□□□□□ -0.95
LINC00539-202ENST00000423575 ORM2P19652 201 aa9.14□□□□□ -0.95
LINC00539-202ENST00000423575 RPL29P47914 159 aaKnown RBP9.14□□□□□ -0.95
LINC00539-202ENST00000423575 EIF2B2P49770 351 aaKnown RBP9.14□□□□□ -0.95
LINC00539-202ENST00000423575 PLP1P60201 277 aa9.14□□□□□ -0.95
LINC00539-202ENST00000423575 B2MP61769 119 aa9.14□□□□□ -0.95
LINC00539-202ENST00000423575 CD300EQ496F6 205 aaPredicted RBP9.14□□□□□ -0.95
LINC00539-202ENST00000423575 OR1B1Q8NGR6 318 aa9.14□□□□□ -0.95
LINC00539-202ENST00000423575 RSG1Q9BU20 258 aa9.14□□□□□ -0.95
LINC00539-202ENST00000423575 VSIRQ9H7M9 311 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms