RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 F2RL2O00254 374 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 NCR2O95944 276 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 HLA-DRB1P01911 266 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 CT45A6P0DMU7 189 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 CT45A5P0DMU8 189 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 CT45A7P0DMV0 189 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 MSMPQ1L6U9 139 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 FAM231DQ6ZW35 169 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 ZNF257Q9Y2Q1 563 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 TACC2O95359 2948 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 SRRM5B3KS81 715 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 C9orf172C9J069 976 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 TMEM238C9JI98 176 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 CD5LO43866 347 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 COL8A1P27658 744 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 ITLN1Q8WWA0 313 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 FXYD5Q96DB9 178 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 A0A1B0GXF2 115 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 J3QW42 95 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 OR5AL1P0C617 328 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 FAM216BQ8N7L0 139 aa13.44□□□□□ -0.26
PKP4-204ENST00000421462 MRPL32Q9BYC8 188 aaKnown RBP13.44□□□□□ -0.26
PKP4-204ENST00000421462 hADV38S2A0JD32 116 aa13.43□□□□□ -0.26
PKP4-204ENST00000421462 APOHP02749 345 aaPredicted RBP13.43□□□□□ -0.26
PKP4-204ENST00000421462 LIPFP07098 398 aa13.43□□□□□ -0.26
PKP4-204ENST00000421462 HIST1H1AQ02539 215 aaPredicted RBP13.43□□□□□ -0.26
PKP4-204ENST00000421462 GPR82Q96P67 336 aa13.43□□□□□ -0.26
PKP4-204ENST00000421462 KBTBD11-OT1A0A1B0GTJ5 212 aa13.43□□□□□ -0.26
PKP4-204ENST00000421462 C2orf83Q53S99 150 aa13.43□□□□□ -0.26
PKP4-204ENST00000421462 RUSC1-AS1Q66K80 236 aa13.43□□□□□ -0.26
PKP4-204ENST00000421462 C19orf24Q9BVV8 132 aa13.43□□□□□ -0.26
PKP4-204ENST00000421462 ACP1P24666 158 aa13.43□□□□□ -0.26
PKP4-204ENST00000421462 PRNTQ86SH4 94 aa13.43□□□□□ -0.26
PKP4-204ENST00000421462 DLL1O00548 723 aa13.42□□□□□ -0.26
PKP4-204ENST00000421462 FAM87AP0C7U9 286 aa13.42□□□□□ -0.26
PKP4-204ENST00000421462 PRSS57Q6UWY2 283 aa13.42□□□□□ -0.26
PKP4-204ENST00000421462 WFDC3Q8IUB2 231 aa13.42□□□□□ -0.26
PKP4-204ENST00000421462 PRSS3P2Q8NHM4 247 aa13.42□□□□□ -0.26
PKP4-204ENST00000421462 MRPL20Q9BYC9 149 aaKnown RBP13.42□□□□□ -0.26
PKP4-204ENST00000421462 PSMB11A5LHX3 300 aa13.42□□□□□ -0.26
PKP4-204ENST00000421462 FBLL1A6NHQ2 334 aaKnown RBP13.42□□□□□ -0.26
PKP4-204ENST00000421462 NBEAP1P0C6P0 100 aa13.42□□□□□ -0.26
PKP4-204ENST00000421462 NHLH1Q02575 133 aa13.42□□□□□ -0.26
PKP4-204ENST00000421462 TMEM97Q5BJF2 176 aa13.42□□□□□ -0.26
PKP4-204ENST00000421462 Q6ZT83 130 aa13.42□□□□□ -0.26
PKP4-204ENST00000421462 FER1L6-AS1Q8NA97 138 aa13.42□□□□□ -0.26
PKP4-204ENST00000421462 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.41□□□□□ -0.26
PKP4-204ENST00000421462 IGLC1P0CG04 106 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 FAM106CPP0CH98 169 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 FAM106AQ4KMX7 169 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 FAM71F2Q6NXP2 309 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 CHCHD1Q96BP2 118 aaKnown RBP13.41□□□□□ -0.26
PKP4-204ENST00000421462 ZNF430Q9H8G1 570 aaPredicted RBP13.41□□□□□ -0.26
PKP4-204ENST00000421462 F11RQ9Y624 299 aaKnown RBP13.41□□□□□ -0.26
PKP4-204ENST00000421462 A0A1W2PRD5 423 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 A0A1W2PRF3 423 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 A0A1W2PRM7 423 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 CRXO43186 299 aaPredicted RBP13.41□□□□□ -0.26
PKP4-204ENST00000421462 GUSBP1Q15486 140 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 ATP5L2Q7Z4Y8 100 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 OR1L4Q8NGR5 311 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 H1FXQ92522 213 aaKnown RBP13.41□□□□□ -0.26
PKP4-204ENST00000421462 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 SERTM2A0A1B0GWG4 89 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 IGKV3-15P01624 115 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 WT1-ASQ06250 92 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 HSPB8Q9UJY1 196 aa13.41□□□□□ -0.26
PKP4-204ENST00000421462 LAMA5O15230 3695 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 IGHV3-72A0A0B4J1Y9 119 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 DIAPH2-AS1Q14236 149 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 FAM162BQ5T6X4 162 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 RBPMS2Q6ZRY4 209 aaKnown RBP13.4□□□□□ -0.26
PKP4-204ENST00000421462 C7orf69Q9H7B7 122 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 AP5S1Q9NUS5 200 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 IGHV1-18A0A0C4DH31 117 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 M0R1B8 84 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 C2orf91Q6ZV80 131 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 JMJD8Q96S16 334 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 THYN1Q9P016 225 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 DSCAML1Q8TD84 2053 aa13.4□□□□□ -0.26
PKP4-204ENST00000421462 TMSB15BA0A087X1C1 80 aa13.39□□□□□ -0.27
PKP4-204ENST00000421462 PRB3Q04118 309 aaPredicted RBP13.39□□□□□ -0.27
PKP4-204ENST00000421462 PET117Q6UWS5 81 aa13.39□□□□□ -0.27
PKP4-204ENST00000421462 FA2HQ7L5A8 372 aa13.39□□□□□ -0.27
PKP4-204ENST00000421462 EXOC3-AS1Q8N2X6 119 aa13.39□□□□□ -0.27
PKP4-204ENST00000421462 OR1L8Q8NGR8 309 aa13.39□□□□□ -0.27
PKP4-204ENST00000421462 SRSF12Q8WXF0 261 aaKnown RBP13.39□□□□□ -0.27
PKP4-204ENST00000421462 ADTRPQ96IZ2 230 aa13.39□□□□□ -0.27
PKP4-204ENST00000421462 CSMD1Q96PZ7 3565 aa13.39□□□□□ -0.27
PKP4-204ENST00000421462 FNDC10F2Z333 226 aa13.39□□□□□ -0.27
PKP4-204ENST00000421462 RABAC1Q9UI14 185 aa13.39□□□□□ -0.27
PKP4-204ENST00000421462 CNOT1A5YKK6 2376 aaKnown RBP13.38□□□□□ -0.27
PKP4-204ENST00000421462 TCRBV4S1A1TA0A5B7 111 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 ENSAO43768 121 aaKnown RBP13.38□□□□□ -0.27
PKP4-204ENST00000421462 ARMS2P0C7Q2 107 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 RPL24P83731 157 aaKnown RBP13.38□□□□□ -0.27
PKP4-204ENST00000421462 GOLT1AQ6ZVE7 132 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 SMIM12Q96EX1 92 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 CCL3L1P16619 93 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 NMUP48645 174 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms