RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 PATE2Q6UY27 113 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 RNASEH2CQ8TDP1 164 aaKnown RBP8.76□□□□□ -1.01
DDX56-203ENST00000421223 C14orf144Q96I85 54 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 EAF1Q96JC9 268 aaPredicted RBP8.76□□□□□ -1.01
DDX56-203ENST00000421223 CA1P00915 261 aaPredicted RBP8.76□□□□□ -1.01
DDX56-203ENST00000421223 FRMD6-AS1P0C7T7 363 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 CBLN1P23435 193 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 GPR6P46095 362 aaPredicted RBP8.76□□□□□ -1.01
DDX56-203ENST00000421223 GNG5P63218 68 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 TEX45Q8NA69 505 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 SLC25A2Q9BXI2 301 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 FAM208BQ5VWN6 2430 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 MYO18BQ8IUG5 2567 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 SERTM2A0A1B0GWG4 89 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 GNLYP22749 145 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 SRP14P37108 136 aaKnown RBP8.75□□□□□ -1.01
DDX56-203ENST00000421223 USF2Q15853 346 aaPredicted RBP8.75□□□□□ -1.01
DDX56-203ENST00000421223 MRGPRG-AS1Q2M3A8 158 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 PRR31Q5SQ13 230 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 TMEM183AQ8IXX5 376 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 OR8I2Q8N0Y5 310 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 DPM3Q9P2X0 92 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 IGKV1D-37A0A075B6S9 117 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 GRIFINA4D1Z8 144 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 FNDC10F2Z333 226 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 COMPP49747 757 aaPredicted RBP8.75□□□□□ -1.01
DDX56-203ENST00000421223 ZNF137PP52743 207 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 ATP5IP56385 69 aaPredicted RBP8.75□□□□□ -1.01
DDX56-203ENST00000421223 COA6Q5JTJ3 125 aaKnown RBP8.75□□□□□ -1.01
DDX56-203ENST00000421223 FAM71F2Q6NXP2 309 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 C8orf31Q8N9H6 132 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 PACRGQ96M98 296 aaPredicted RBP8.75□□□□□ -1.01
DDX56-203ENST00000421223 TXNDC17Q9BRA2 123 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 WNT10AQ9GZT5 417 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 AMMECR1Q9Y4X0 333 aaPredicted RBP8.75□□□□□ -1.01
DDX56-203ENST00000421223 GGCTO75223 188 aaKnown RBP8.75□□□□□ -1.01
DDX56-203ENST00000421223 IER3P46695 156 aa8.75□□□□□ -1.01
DDX56-203ENST00000421223 CENPEQ02224 2701 aa8.74□□□□□ -1.01
DDX56-203ENST00000421223 MRPL41Q8IXM3 137 aaKnown RBP8.74□□□□□ -1.01
DDX56-203ENST00000421223 OR1L4Q8NGR5 311 aa8.74□□□□□ -1.01
DDX56-203ENST00000421223 FAM167A-AS1Q96KT0 104 aa8.74□□□□□ -1.01
DDX56-203ENST00000421223 TYMSP04818 313 aa8.74□□□□□ -1.01
DDX56-203ENST00000421223 SLC25A5P05141 298 aaKnown RBP8.74□□□□□ -1.01
DDX56-203ENST00000421223 FBLN7Q53RD9 439 aa8.74□□□□□ -1.01
DDX56-203ENST00000421223 TPTE2P1Q5T6R2 138 aa8.74□□□□□ -1.01
DDX56-203ENST00000421223 BEND2Q8NDZ0 799 aa8.74□□□□□ -1.01
DDX56-203ENST00000421223 TNFRSF14Q92956 283 aa8.74□□□□□ -1.01
DDX56-203ENST00000421223 PGPA6NDG6 321 aa8.73□□□□□ -1.01
DDX56-203ENST00000421223 IGHV3-23P01764 117 aa8.73□□□□□ -1.01
DDX56-203ENST00000421223 ACTL10Q5JWF8 245 aa8.73□□□□□ -1.01
DDX56-203ENST00000421223 OR1P1Q8NH06 330 aa8.73□□□□□ -1.01
DDX56-203ENST00000421223 ZNF705GA8MUZ8 300 aaPredicted RBP8.73□□□□□ -1.01
DDX56-203ENST00000421223 AMBPP02760 352 aa8.73□□□□□ -1.01
DDX56-203ENST00000421223 ZFP36P26651 326 aaKnown RBP8.73□□□□□ -1.01
DDX56-203ENST00000421223 PDLIM4P50479 330 aa8.73□□□□□ -1.01
DDX56-203ENST00000421223 KIAA1644Q3SXP7 199 aa8.73□□□□□ -1.01
DDX56-203ENST00000421223 MRPL54Q6P161 138 aaKnown RBP8.73□□□□□ -1.01
DDX56-203ENST00000421223 IGHV3OR16-10A0A075B7F0 116 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 IGHV3-35A0A0C4DH35 117 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 C19orf84I3L1E1 186 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 HYPMO75409 117 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 SELENOTP62341 195 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 VMO1Q7Z5L0 202 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 C19orf24Q9BVV8 132 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 CHODLQ9H9P2 273 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 IGHV3OR16-8A0A075B7F1 116 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 PSG1P11464 419 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 CD99P14209 185 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 CNN1P51911 297 aaKnown RBP8.72□□□□□ -1.01
DDX56-203ENST00000421223 RPEL1Q2QD12 228 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 BAGE2Q86Y30 109 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 OR1L6Q8NGR2 347 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 OR5R1Q8NH85 324 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 RASL11BQ9BPW5 248 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 MRPL32Q9BYC8 188 aaKnown RBP8.72□□□□□ -1.01
DDX56-203ENST00000421223 CLEC5AQ9NY25 188 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 F11RQ9Y624 299 aaKnown RBP8.72□□□□□ -1.01
DDX56-203ENST00000421223 FLNCQ14315 2725 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 CELSR1Q9NYQ6 3014 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 TEX22C9J3V5 150 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 CEACAM3P40198 252 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 DYNAPQ8N1N2 210 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 TMEM256Q8N2U0 113 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 NEU4Q8WWR8 484 aaPredicted RBP8.72□□□□□ -1.01
DDX56-203ENST00000421223 PERPQ96FX8 193 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 ASCL2Q99929 193 aa8.72□□□□□ -1.01
DDX56-203ENST00000421223 CFAP46Q8IYW2 2715 aa8.71□□□□□ -1.01
DDX56-203ENST00000421223 A0A1W2PRE2 83 aa8.71□□□□□ -1.01
DDX56-203ENST00000421223 ISLRO14498 428 aa8.71□□□□□ -1.01
DDX56-203ENST00000421223 NBR2O15453 112 aa8.71□□□□□ -1.01
DDX56-203ENST00000421223 NBEAP1P0C6P0 100 aa8.71□□□□□ -1.01
DDX56-203ENST00000421223 ADMP35318 185 aa8.71□□□□□ -1.01
DDX56-203ENST00000421223 UBE2G1P62253 170 aa8.71□□□□□ -1.01
DDX56-203ENST00000421223 JOSD1Q15040 202 aaPredicted RBP8.71□□□□□ -1.01
DDX56-203ENST00000421223 IBA57Q5T440 356 aaKnown RBP8.71□□□□□ -1.01
DDX56-203ENST00000421223 ATG101Q9BSB4 218 aa8.71□□□□□ -1.01
DDX56-203ENST00000421223 IL36BQ9NZH7 164 aa8.71□□□□□ -1.01
DDX56-203ENST00000421223 PSMB11A5LHX3 300 aa8.71□□□□□ -1.02
DDX56-203ENST00000421223 SNURFLB1AK76 121 aa8.71□□□□□ -1.02
DDX56-203ENST00000421223 CRYGBP07316 175 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms