RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CENPWQ5EE01 88 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 NAV3Q8IVL0 2385 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 IGKV3OR2-268A0A0C4DH90 116 aa8.77□□□□□ -1
PTCH1-206ENST00000421141 OVOL1O14753 267 aa8.77□□□□□ -1
PTCH1-206ENST00000421141 CGAP01215 116 aa8.77□□□□□ -1
PTCH1-206ENST00000421141 STPG2Q8N412 459 aa8.77□□□□□ -1
PTCH1-206ENST00000421141 MT-ND6P03923 174 aa8.77□□□□□ -1.01
PTCH1-206ENST00000421141 PRSS2P07478 247 aa8.77□□□□□ -1.01
PTCH1-206ENST00000421141 C2orf68Q2NKX9 166 aa8.77□□□□□ -1.01
PTCH1-206ENST00000421141 TMEM190Q8WZ59 177 aa8.77□□□□□ -1.01
PTCH1-206ENST00000421141 OR11H4Q8NGC9 324 aa8.77□□□□□ -1.01
PTCH1-206ENST00000421141 VGLL1Q99990 258 aa8.77□□□□□ -1.01
PTCH1-206ENST00000421141 HOXA3O43365 443 aaPredicted RBP8.77□□□□□ -1.01
PTCH1-206ENST00000421141 CCKARP32238 428 aa8.77□□□□□ -1.01
PTCH1-206ENST00000421141 IGLV3-9A0A075B6K5 115 aa8.77□□□□□ -1.01
PTCH1-206ENST00000421141 ERVK11-1P61568 191 aa8.77□□□□□ -1.01
PTCH1-206ENST00000421141 ARHGAP32A7KAX9 2087 aa8.77□□□□□ -1.01
PTCH1-206ENST00000421141 TRAV21A0A0B4J279 112 aa8.77□□□□□ -1.01
PTCH1-206ENST00000421141 RPL35AP18077 110 aaKnown RBP8.77□□□□□ -1.01
PTCH1-206ENST00000421141 TRGV11A0A075B6L2 103 aa8.76□□□□□ -1.01
PTCH1-206ENST00000421141 COQ2Q96H96 371 aa8.76□□□□□ -1.01
PTCH1-206ENST00000421141 TRGV4A0A0C4DH28 118 aa8.76□□□□□ -1.01
PTCH1-206ENST00000421141 A0A1W2PNU3 283 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-206ENST00000421141 LINC01619G3V211 115 aa8.76□□□□□ -1.01
PTCH1-206ENST00000421141 ITGB1BP1O14713 200 aa8.76□□□□□ -1.01
PTCH1-206ENST00000421141 HLA-DQA1P01909 254 aa8.76□□□□□ -1.01
PTCH1-206ENST00000421141 NCOR2Q9Y618 2525 aa8.76□□□□□ -1.01
PTCH1-206ENST00000421141 RPL29P47914 159 aaKnown RBP8.76□□□□□ -1.01
PTCH1-206ENST00000421141 CIARTQ8N365 385 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-206ENST00000421141 OR5AN1Q8NGI8 311 aa8.76□□□□□ -1.01
PTCH1-206ENST00000421141 SFRP2Q96HF1 295 aa8.76□□□□□ -1.01
PTCH1-206ENST00000421141 TMEM191AQ9H0A3 160 aa8.76□□□□□ -1.01
PTCH1-206ENST00000421141 CIRBPQ14011 172 aaKnown RBP8.76□□□□□ -1.01
PTCH1-206ENST00000421141 LYRM7Q5U5X0 104 aa8.76□□□□□ -1.01
PTCH1-206ENST00000421141 FAM110DQ8TAY7 271 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-206ENST00000421141 DAZ1Q9NQZ3 744 aaKnown RBP8.76□□□□□ -1.01
PTCH1-206ENST00000421141 C5orf63A6NC05 138 aa8.75□□□□□ -1.01
PTCH1-206ENST00000421141 DAZAP2Q15038 168 aaPredicted RBP8.75□□□□□ -1.01
PTCH1-206ENST00000421141 TOMM20LQ6UXN7 152 aa8.75□□□□□ -1.01
PTCH1-206ENST00000421141 HIVEP3Q5T1R4 2406 aa8.75□□□□□ -1.01
PTCH1-206ENST00000421141 IL17RELQ6ZVW7 336 aa8.75□□□□□ -1.01
PTCH1-206ENST00000421141 ZMAT4Q9H898 229 aa8.75□□□□□ -1.01
PTCH1-206ENST00000421141 TMEM249Q2WGJ8 235 aa8.75□□□□□ -1.01
PTCH1-206ENST00000421141 TRGV9Q99603 122 aa8.75□□□□□ -1.01
PTCH1-206ENST00000421141 TRBV20OR9-2A0A075B6H5 130 aa8.75□□□□□ -1.01
PTCH1-206ENST00000421141 ZNF324O75467 553 aaPredicted RBP8.75□□□□□ -1.01
PTCH1-206ENST00000421141 ZNF383Q8NA42 475 aa8.75□□□□□ -1.01
PTCH1-206ENST00000421141 F11RQ9Y624 299 aaKnown RBP8.75□□□□□ -1.01
PTCH1-206ENST00000421141 A0A1B0GWJ7 208 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 MPTX1A8MV57 137 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 ZNF562Q6V9R5 426 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 ALKBH7Q9BT30 221 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-206ENST00000421141 TSSC4Q9Y5U2 329 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-206ENST00000421141 LMO1P25800 156 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 SRSF9Q13242 221 aaKnown RBP eCLIP8.74□□□□□ -1.01
PTCH1-206ENST00000421141 VPREB3Q9UKI3 123 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 ZFYVE26Q68DK2 2539 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 Q6AWC8 147 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 RCC1LQ96I51 464 aaKnown RBP8.74□□□□□ -1.01
PTCH1-206ENST00000421141 PARLQ9H300 379 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 NCOR1P1Q9H4R4 102 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 FABP5P3A8MUU1 101 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 GATA2P23769 480 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-206ENST00000421141 Q6ZS49 121 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 ZNF843Q8N446 348 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 SPRY4Q9C004 299 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 ACTL10Q5JWF8 245 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 MIR17HGQ75NE6 70 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 KAAG1Q9UBP8 84 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 APOC4P55056 127 aa8.74□□□□□ -1.01
PTCH1-206ENST00000421141 CRPP02741 224 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 HNRNPA3P51991 378 aaKnown RBP8.73□□□□□ -1.01
PTCH1-206ENST00000421141 Q6ZR03 302 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 C1orf122Q6ZSJ8 110 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 HS3ST6Q96QI5 342 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 C7orf77A4D0Y5 90 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 PSMB2P49721 201 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 MYO18BQ8IUG5 2567 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 ATRXP46100 2492 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 TRAV34A0A0B4J273 112 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 TDGF1P3P51864 188 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 RPL15P61313 204 aaKnown RBP8.73□□□□□ -1.01
PTCH1-206ENST00000421141 ZNF502Q8TBZ5 544 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 VOPP1Q96AW1 172 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 PRADC1Q9BSG0 188 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 ANKRD11Q6UB99 2663 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-206ENST00000421141 TRBV9A0A0B4J1U6 114 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 MALP21145 153 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 HBBP68871 147 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 GFI1Q99684 422 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 SLC25A39Q9BZJ4 359 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-206ENST00000421141 ZFP30Q9Y2G7 519 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 INSP01308 110 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 SYNJ2BPP57105 145 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 FOXL1Q12952 345 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 OR9G4Q8NGQ1 327 aa8.73□□□□□ -1.01
PTCH1-206ENST00000421141 A0A1B0GUS0 222 aa8.72□□□□□ -1.01
PTCH1-206ENST00000421141 VENTXO95231 258 aa8.72□□□□□ -1.01
PTCH1-206ENST00000421141 ZNF688P0C7X2 276 aa8.72□□□□□ -1.01
PTCH1-206ENST00000421141 PSG1P11464 419 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms