RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 RPUSD4Q96CM3 377 aaKnown RBP16.45■□□□□ 0.22
GPC1-202ENST00000420138 C19orf24Q9BVV8 132 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 BIN3Q9NQY0 253 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 TMEM242Q9NWH2 141 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 NANPQ8TBE9 248 aa16.44■□□□□ 0.22
GPC1-202ENST00000420138 PARLQ9H300 379 aa16.44■□□□□ 0.22
GPC1-202ENST00000420138 SAV1Q9H4B6 383 aaPredicted RBP16.44■□□□□ 0.22
GPC1-202ENST00000420138 F8W735 103 aaPredicted RBP16.43■□□□□ 0.22
GPC1-202ENST00000420138 PDE6DO43924 150 aa16.43■□□□□ 0.22
GPC1-202ENST00000420138 CLN5O75503 358 aa16.43■□□□□ 0.22
GPC1-202ENST00000420138 NDUFB8O95169 186 aa16.43■□□□□ 0.22
GPC1-202ENST00000420138 IGKV1-17P01599 117 aa16.43■□□□□ 0.22
GPC1-202ENST00000420138 MORN5Q5VZ52 161 aa16.43■□□□□ 0.22
GPC1-202ENST00000420138 UNQ5815/PRO19632Q6UWF5 114 aa16.43■□□□□ 0.22
GPC1-202ENST00000420138 ZNF503Q96F45 646 aa16.43■□□□□ 0.22
GPC1-202ENST00000420138 TXNDC17Q9BRA2 123 aa16.43■□□□□ 0.22
GPC1-202ENST00000420138 PRELID1Q9Y255 219 aa16.43■□□□□ 0.22
GPC1-202ENST00000420138 G3V318 75 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 ELOBQ15370 118 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 ECSCRQ19T08 205 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 C19orf54Q5BKX5 351 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 TMUB1Q9BVT8 246 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 CTDSP1Q9GZU7 261 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 DNAJC4Q9NNZ3 241 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 TEX15Q9BXT5 2789 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 CRIP2P52943 208 aaPredicted RBP16.42■□□□□ 0.22
GPC1-202ENST00000420138 UBE2G2P60604 165 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 CST9LP1Q5W188 147 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 C9orf139Q6ZV77 190 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 C2CD4CQ8TF44 421 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 DOK5Q9P104 306 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 S4R3C0 116 aa16.42■□□□□ 0.22
GPC1-202ENST00000420138 FLNAP21333 2647 aaKnown RBP16.42■□□□□ 0.22
GPC1-202ENST00000420138 F6UZH7 168 aa16.41■□□□□ 0.22
GPC1-202ENST00000420138 OR2J3O76001 311 aa16.41■□□□□ 0.22
GPC1-202ENST00000420138 GCHFRP30047 84 aa16.41■□□□□ 0.22
GPC1-202ENST00000420138 FAM167A-AS1Q96KT0 104 aa16.41■□□□□ 0.22
GPC1-202ENST00000420138 TMEM68Q96MH6 324 aa16.41■□□□□ 0.22
GPC1-202ENST00000420138 CLDN34H7C241 214 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 ADIRFQ15847 76 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 TIGITQ495A1 244 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 ZNF343Q6P1L6 599 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 Q8WTZ3 238 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 ZNF48Q96MX3 618 aaPredicted RBP16.4■□□□□ 0.22
GPC1-202ENST00000420138 TRBV9A0A0B4J1U6 114 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 IGHV4-59P01825 116 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 PSG1P11464 419 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 ATP5G3P48201 142 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 PLP1P60201 277 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 RPL23P62829 140 aaKnown RBP16.4■□□□□ 0.22
GPC1-202ENST00000420138 C1QL4Q86Z23 238 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 OR1L4Q8NGR5 311 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 UHRF2Q96PU4 802 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 MRPL32Q9BYC8 188 aaKnown RBP16.4■□□□□ 0.22
GPC1-202ENST00000420138 PITPNC1Q9UKF7 332 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 AKAP9Q99996 3911 aa16.4■□□□□ 0.22
GPC1-202ENST00000420138 TRAV5A0A0B4J249 113 aa16.39■□□□□ 0.21
GPC1-202ENST00000420138 COX7A2P2O60397 106 aa16.39■□□□□ 0.21
GPC1-202ENST00000420138 NPPCP23582 126 aa16.39■□□□□ 0.21
GPC1-202ENST00000420138 C10orf113Q5VZT2 155 aa16.39■□□□□ 0.21
GPC1-202ENST00000420138 CSPG4Q6UVK1 2322 aa16.39■□□□□ 0.21
GPC1-202ENST00000420138 PFDN5Q99471 154 aa16.39■□□□□ 0.21
GPC1-202ENST00000420138 TECRQ9NZ01 308 aaKnown RBP16.39■□□□□ 0.21
GPC1-202ENST00000420138 THYN1Q9P016 225 aa16.39■□□□□ 0.21
GPC1-202ENST00000420138 URGCP-MRPS24S4R325 110 aa16.39■□□□□ 0.21
GPC1-202ENST00000420138 IGHG2P01859 326 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 C8orf88P0DMB2 117 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 IER3P46695 156 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 BLCAPP62952 87 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 Q6ZS46 218 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 RNF2Q99496 336 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 SLC25A2Q9BXI2 301 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 FBXL7Q9UJT9 491 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 M0QZK8 103 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 IGF1P05019 195 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 CXCL1P09341 107 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 ORM2P19652 201 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 C16orf82Q7Z2V1 217 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 C21orf62Q9NYP8 219 aa16.38■□□□□ 0.21
GPC1-202ENST00000420138 ELOA3CA0A087WX78 387 aaPredicted RBP16.37■□□□□ 0.21
GPC1-202ENST00000420138 HIST1H1BP16401 226 aaKnown RBP16.37■□□□□ 0.21
GPC1-202ENST00000420138 MFAP4P55083 255 aa16.37■□□□□ 0.21
GPC1-202ENST00000420138 OR1B1Q8NGR6 318 aa16.37■□□□□ 0.21
GPC1-202ENST00000420138 ZNF355PQ9NSJ1 428 aa16.37■□□□□ 0.21
GPC1-202ENST00000420138 YTHDF2Q9Y5A9 579 aaKnown RBP16.37■□□□□ 0.21
GPC1-202ENST00000420138 TRAV41A0A0B4J266 112 aa16.36■□□□□ 0.21
GPC1-202ENST00000420138 FCGR2BP31994 310 aaPredicted RBP16.36■□□□□ 0.21
GPC1-202ENST00000420138 RPS10P46783 165 aaKnown RBP16.36■□□□□ 0.21
GPC1-202ENST00000420138 PQLC2Q6ZP29 291 aa16.36■□□□□ 0.21
GPC1-202ENST00000420138 OR51G1Q8NGK1 321 aa16.36■□□□□ 0.21
GPC1-202ENST00000420138 LINC00527Q9UJ94 153 aa16.36■□□□□ 0.21
GPC1-202ENST00000420138 MYO9AB2RTY4 2548 aa16.36■□□□□ 0.21
GPC1-202ENST00000420138 TGIF2-C20orf24A0A0A6YYL0 155 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 TAS2R45P59539 299 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 LINC00305Q7Z4B0 112 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 VN1R17PQ8TDU5 208 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 CD5LO43866 347 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 NDUFB4O95168 129 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 IGHV3-23P01764 117 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 S100A6P06703 90 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms