RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 TDGF1P3P51864 188 aa9.41□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 NUTF2P61970 127 aaKnown RBP9.41□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 ASPHD1Q5U4P2 390 aa9.41□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 FAM231DQ6ZW35 169 aa9.41□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 C5orf17Q8NAS9 161 aa9.41□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 RITA1Q96K30 269 aa9.41□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 TRGV9Q99603 122 aa9.41□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 HIGD1AQ9Y241 93 aa9.41□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 ZNF137PP52743 207 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 TEX43Q6ZNM6 134 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 FAM19A2Q8N3H0 131 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 NUP35Q8NFH5 326 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 NEU1Q99519 415 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 TXN2Q99757 166 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 RASL11BQ9BPW5 248 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 IGKV1D-37A0A075B6S9 117 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 A0A1W2PS18 150 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 IGLC7A0M8Q6 106 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 CGB1A6NKQ9 187 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 A8MWL6 223 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 LINC00310P59036 64 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 RNASEKQ6P5S7 137 aaKnown RBP9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 ZNF596Q8TC21 504 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 TSKUQ8WUA8 353 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 C20orf144Q9BQM9 153 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 ONECUT1Q9UBC0 465 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 FBXL7Q9UJT9 491 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 SIGLEC9Q9Y336 463 aa9.4□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 PPIAL4CA0A0B4J2A2 164 aa9.4□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.4□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 LYNX1G3V0Z9 82 aa9.4□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 PPIAL4GP0DN37 164 aa9.4□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 LYNX1P0DP58 116 aa9.4□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 COMPP49747 757 aaPredicted RBP9.4□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 DLX1P56177 255 aa9.4□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 LEMD1Q68G75 181 aa9.4□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 RCHY1Q96PM5 261 aa9.4□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 FBXL15Q9H469 300 aa9.4□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 CUL9Q8IWT3 2517 aa9.4□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 ZFHX4Q86UP3 3567 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 TOX4O94842 621 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 G0S2P27469 103 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 TDRG1Q3Y452 100 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 IGHV1-3A0A0C4DH29 117 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 SHISA9B4DS77 424 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 M0R2Z0 102 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 FCN3O75636 299 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 FAM87AP0C7U9 286 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 CNTFRP26992 372 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 FOXC1Q12948 553 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 SLAQ13239 276 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 C19orf35Q6ZS72 473 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 C22orf46C9J442 243 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 MUC15Q8N387 334 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 TMEM116Q8NCL8 245 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 C8orf46Q8TAG6 207 aa9.39□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 FAM90A27PA6NNH2 459 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 SPATA45Q537H7 98 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 KLHDC1Q8N7A1 406 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 FMC1Q96HJ9 113 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 SSBP4Q9BWG4 385 aaPredicted RBP9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 Q9H3A6 140 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 COL8A1P27658 744 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 MMDQ15546 238 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 PRR30Q53SZ7 412 aaPredicted RBP9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 DMRTC2Q8IXT2 367 aaPredicted RBP9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 SRSF12Q8WXF0 261 aaKnown RBP9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 RPP21Q9H633 154 aaKnown RBP9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 F11RQ9Y624 299 aaKnown RBP9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 ABCA4P78363 2273 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 BUB1B-PAK6H3BSN5 160 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 CHEK1O14757 476 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 RPLP1P05386 114 aaKnown RBP9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 GPR6P46095 362 aaPredicted RBP9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 DLX6P56179 175 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 FAM162BQ5T6X4 162 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 OR8B3Q8NGG8 313 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 LINC01560Q8TB33 94 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 OR8B2Q96RD0 313 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 GSX1Q9H4S2 264 aaPredicted RBP9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 JKAMPQ9P055 326 aa9.38□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 ZNF292O60281 2723 aa9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 HBBP68871 147 aa9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 TCF15Q12870 199 aa9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 HES1Q14469 280 aa9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 Q8NA96 180 aa9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 C18orf32Q8TCD1 76 aa9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 K7EQM0 130 aa9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 RAB4AP20338 218 aa9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 TCF24Q7RTU0 167 aa9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 ATP5L2Q7Z4Y8 100 aa9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 WIPF2Q8TF74 440 aaPredicted RBP9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 SMIM12Q96EX1 92 aa9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 MRPL27Q9P0M9 148 aaKnown RBP9.37□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 TNFRSF13BO14836 293 aaPredicted RBP9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 PSG1P11464 419 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 OR4F17Q8NGA8 305 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 TIMD4Q96H15 378 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 WNT10AQ9GZT5 417 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms