RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 SFT2D2O95562 160 aa13.02□□□□□ -0.33
CPNE1-210ENST00000416778 OR51G1Q8NGK1 321 aa13.02□□□□□ -0.33
CPNE1-210ENST00000416778 PHLDA1Q8WV24 401 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-210ENST00000416778 KLK5Q9Y337 293 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-210ENST00000416778 AGRNO00468 2067 aa13.01□□□□□ -0.33
CPNE1-210ENST00000416778 VAMP1P23763 118 aa13.01□□□□□ -0.33
CPNE1-210ENST00000416778 ZNF90Q03938 601 aa13.01□□□□□ -0.33
CPNE1-210ENST00000416778 PPP1R1AQ13522 171 aa13.01□□□□□ -0.33
CPNE1-210ENST00000416778 ACTL10Q5JWF8 245 aa13.01□□□□□ -0.33
CPNE1-210ENST00000416778 MORN3Q6PF18 240 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-210ENST00000416778 SRRQ9GZT4 340 aa13.01□□□□□ -0.33
CPNE1-210ENST00000416778 C11orf68Q9H3H3 251 aaKnown RBP13.01□□□□□ -0.33
CPNE1-210ENST00000416778 SEPSECSQ9HD40 501 aaKnown RBP13.01□□□□□ -0.33
CPNE1-210ENST00000416778 TMED3Q9Y3Q3 217 aa13.01□□□□□ -0.33
CPNE1-210ENST00000416778 FAM90A26D6RGX4 464 aa13□□□□□ -0.33
CPNE1-210ENST00000416778 DEFB4AO15263 64 aa13□□□□□ -0.33
CPNE1-210ENST00000416778 LY6G6CO95867 125 aa13□□□□□ -0.33
CPNE1-210ENST00000416778 NANOS2P60321 138 aaKnown RBP13□□□□□ -0.33
CPNE1-210ENST00000416778 C11orf45Q8TAV5 145 aa13□□□□□ -0.33
CPNE1-210ENST00000416778 RNF125Q96EQ8 232 aa13□□□□□ -0.33
CPNE1-210ENST00000416778 ZFP92A6NM28 416 aa12.99□□□□□ -0.33
CPNE1-210ENST00000416778 SPP1P10451 314 aa12.99□□□□□ -0.33
CPNE1-210ENST00000416778 IAPPP10997 89 aa12.99□□□□□ -0.33
CPNE1-210ENST00000416778 BAK1Q16611 211 aa12.99□□□□□ -0.33
CPNE1-210ENST00000416778 TMEM41BQ5BJD5 291 aa12.99□□□□□ -0.33
CPNE1-210ENST00000416778 PSMG4Q5JS54 123 aa12.99□□□□□ -0.33
CPNE1-210ENST00000416778 SIGLEC15Q6ZMC9 328 aa12.99□□□□□ -0.33
CPNE1-210ENST00000416778 CSNK1G2-AS1Q8NCQ2 148 aa12.99□□□□□ -0.33
CPNE1-210ENST00000416778 NRN1Q9NPD7 142 aa12.99□□□□□ -0.33
CPNE1-210ENST00000416778 SNRPGP15A8MWD9 76 aa12.98□□□□□ -0.33
CPNE1-210ENST00000416778 MED6O75586 246 aa12.98□□□□□ -0.33
CPNE1-210ENST00000416778 HOXB5P09067 269 aa12.98□□□□□ -0.33
CPNE1-210ENST00000416778 RBMY1A1P0DJD3 496 aaKnown RBP12.98□□□□□ -0.33
CPNE1-210ENST00000416778 RBMY1CP0DJD4 496 aa12.98□□□□□ -0.33
CPNE1-210ENST00000416778 RAB11AP62491 216 aa12.98□□□□□ -0.33
CPNE1-210ENST00000416778 RBMY1FQ15415 496 aaKnown RBP12.98□□□□□ -0.33
CPNE1-210ENST00000416778 SPANXN2Q5MJ10 180 aa12.98□□□□□ -0.33
CPNE1-210ENST00000416778 OR8G2PQ6IF36 304 aa12.98□□□□□ -0.33
CPNE1-210ENST00000416778 CENPSQ8N2Z9 138 aa12.98□□□□□ -0.33
CPNE1-210ENST00000416778 Q8NAQ8 132 aa12.98□□□□□ -0.33
CPNE1-210ENST00000416778 SLC35E1Q96K37 410 aa12.98□□□□□ -0.33
CPNE1-210ENST00000416778 MAGT1Q9H0U3 335 aa12.98□□□□□ -0.33
CPNE1-210ENST00000416778 IGKV1OR2-108A0A075B7D4 117 aa12.97□□□□□ -0.33
CPNE1-210ENST00000416778 ZNF705EA8MWA4 302 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-210ENST00000416778 SYNGR2O43760 224 aa12.97□□□□□ -0.33
CPNE1-210ENST00000416778 C4BPBP20851 252 aa12.97□□□□□ -0.33
CPNE1-210ENST00000416778 SNRPD3P62318 126 aaKnown RBP12.97□□□□□ -0.33
CPNE1-210ENST00000416778 GGNBP1Q5YKI7 109 aa12.97□□□□□ -0.33
CPNE1-210ENST00000416778 TRGV9Q99603 122 aa12.97□□□□□ -0.33
CPNE1-210ENST00000416778 SDHCQ99643 169 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-210ENST00000416778 PBDC1Q9BVG4 233 aa12.97□□□□□ -0.33
CPNE1-210ENST00000416778 MFFQ9GZY8 342 aa12.97□□□□□ -0.33
CPNE1-210ENST00000416778 KMT2AQ03164 3969 aa12.96□□□□□ -0.33
CPNE1-210ENST00000416778 C9orf170A2RU37 121 aa12.96□□□□□ -0.33
CPNE1-210ENST00000416778 PRSS46E5RG02 174 aa12.96□□□□□ -0.33
CPNE1-210ENST00000416778 H3BMM0 161 aa12.96□□□□□ -0.33
CPNE1-210ENST00000416778 UBE2MP61081 183 aaKnown RBP12.96□□□□□ -0.33
CPNE1-210ENST00000416778 ID3Q02535 119 aa12.96□□□□□ -0.33
CPNE1-210ENST00000416778 C1orf194Q5T5A4 169 aa12.96□□□□□ -0.33
CPNE1-210ENST00000416778 THAP8Q8NA92 274 aa12.96□□□□□ -0.33
CPNE1-210ENST00000416778 CIB3Q96Q77 187 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-210ENST00000416778 PFDN2Q9UHV9 154 aa12.96□□□□□ -0.33
CPNE1-210ENST00000416778 FLVCR2Q9UPI3 526 aa12.96□□□□□ -0.33
CPNE1-210ENST00000416778 X6R8D5 127 aa12.96□□□□□ -0.33
CPNE1-210ENST00000416778 BIRC6Q9NR09 4857 aa12.95□□□□□ -0.34
CPNE1-210ENST00000416778 NAP1L6A6NFF2 107 aa12.95□□□□□ -0.34
CPNE1-210ENST00000416778 WRBO00258 174 aa12.95□□□□□ -0.34
CPNE1-210ENST00000416778 NDUFB6O95139 128 aa12.95□□□□□ -0.34
CPNE1-210ENST00000416778 FABP1P07148 127 aa12.95□□□□□ -0.34
CPNE1-210ENST00000416778 RPP30P78346 268 aaKnown RBP12.95□□□□□ -0.34
CPNE1-210ENST00000416778 OR2F1Q13607 317 aa12.95□□□□□ -0.34
CPNE1-210ENST00000416778 WDR12Q9GZL7 423 aaKnown RBP12.95□□□□□ -0.34
CPNE1-210ENST00000416778 CLEC5AQ9NY25 188 aa12.95□□□□□ -0.34
CPNE1-210ENST00000416778 FBXL17Q9UF56 701 aa12.95□□□□□ -0.34
CPNE1-210ENST00000416778 PAIP2BQ9ULR5 123 aaKnown RBP12.95□□□□□ -0.34
CPNE1-210ENST00000416778 IGHV4-28A0A0C4DH34 117 aa12.94□□□□□ -0.34
CPNE1-210ENST00000416778 ADAP1O75689 374 aa12.94□□□□□ -0.34
CPNE1-210ENST00000416778 MIFP14174 115 aa12.94□□□□□ -0.34
CPNE1-210ENST00000416778 NKX2-1P43699 371 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-210ENST00000416778 HRH4Q9H3N8 390 aa12.94□□□□□ -0.34
CPNE1-210ENST00000416778 ELOA3CA0A087WX78 387 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-210ENST00000416778 NUP62P37198 522 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-210ENST00000416778 LYZP61626 148 aa12.93□□□□□ -0.34
CPNE1-210ENST00000416778 SPANXN5Q5MJ07 72 aa12.93□□□□□ -0.34
CPNE1-210ENST00000416778 LGALS9CQ6DKI2 356 aa12.93□□□□□ -0.34
CPNE1-210ENST00000416778 TMEM182Q6ZP80 229 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-210ENST00000416778 SOCS3O14543 225 aa12.92□□□□□ -0.34
CPNE1-210ENST00000416778 CFDP00746 253 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-210ENST00000416778 OR4E1P0C645 316 aa12.92□□□□□ -0.34
CPNE1-210ENST00000416778 GSG1LQ6UXU4 331 aa12.92□□□□□ -0.34
CPNE1-210ENST00000416778 TBC1D24Q9ULP9 559 aa12.92□□□□□ -0.34
CPNE1-210ENST00000416778 VPS13DQ5THJ4 4388 aa12.91□□□□□ -0.34
CPNE1-210ENST00000416778 LINC00854A0A1B0GVQ3 168 aa12.91□□□□□ -0.34
CPNE1-210ENST00000416778 HLA-DRB4P13762 266 aa12.91□□□□□ -0.34
CPNE1-210ENST00000416778 BTCP35070 178 aa12.91□□□□□ -0.34
CPNE1-210ENST00000416778 INPP1P49441 399 aa12.91□□□□□ -0.34
CPNE1-210ENST00000416778 DEFB1P60022 68 aa12.91□□□□□ -0.34
CPNE1-210ENST00000416778 NUTF2P61970 127 aaKnown RBP12.91□□□□□ -0.34
CPNE1-210ENST00000416778 POLR2GP62487 172 aaKnown RBP eCLIP12.91□□□□□ -0.34
CPNE1-210ENST00000416778 GDF5OSQ5U4N7 250 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms