RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 PAIP2BQ9ULR5 123 aaKnown RBP18.28■□□□□ 0.52
HLA-C-204ENST00000415537 TMED3Q9Y3Q3 217 aa18.28■□□□□ 0.52
HLA-C-204ENST00000415537 ZNF701M0R085 212 aaPredicted RBP18.27■□□□□ 0.52
HLA-C-204ENST00000415537 SPP1P10451 314 aa18.27■□□□□ 0.52
HLA-C-204ENST00000415537 GAMTQ14353 236 aa18.27■□□□□ 0.52
HLA-C-204ENST00000415537 TMEM41BQ5BJD5 291 aa18.27■□□□□ 0.52
HLA-C-204ENST00000415537 MORN3Q6PF18 240 aaPredicted RBP18.27■□□□□ 0.52
HLA-C-204ENST00000415537 RNF125Q96EQ8 232 aa18.27■□□□□ 0.52
HLA-C-204ENST00000415537 HYDINQ4G0P3 5121 aa18.27■□□□□ 0.51
HLA-C-204ENST00000415537 KNCNA6PVL3 124 aa18.26■□□□□ 0.51
HLA-C-204ENST00000415537 FAM90A26D6RGX4 464 aa18.26■□□□□ 0.51
HLA-C-204ENST00000415537 BUB3O43684 328 aa18.26■□□□□ 0.51
HLA-C-204ENST00000415537 FABP1P07148 127 aa18.26■□□□□ 0.51
HLA-C-204ENST00000415537 IAPPP10997 89 aa18.26■□□□□ 0.51
HLA-C-204ENST00000415537 NUP62P37198 522 aaPredicted RBP18.26■□□□□ 0.51
HLA-C-204ENST00000415537 SNRPD3P62318 126 aaKnown RBP18.26■□□□□ 0.51
HLA-C-204ENST00000415537 PPP1R1AQ13522 171 aa18.26■□□□□ 0.51
HLA-C-204ENST00000415537 PSMG4Q5JS54 123 aa18.26■□□□□ 0.51
HLA-C-204ENST00000415537 ACTL10Q5JWF8 245 aa18.26■□□□□ 0.51
HLA-C-204ENST00000415537 SIGLEC15Q6ZMC9 328 aa18.26■□□□□ 0.51
HLA-C-204ENST00000415537 TRPT1Q86TN4 253 aaKnown RBP18.26■□□□□ 0.51
HLA-C-204ENST00000415537 LINC00476Q8WZB0 136 aa18.26■□□□□ 0.51
HLA-C-204ENST00000415537 PBDC1Q9BVG4 233 aa18.26■□□□□ 0.51
HLA-C-204ENST00000415537 C11orf68Q9H3H3 251 aaKnown RBP18.26■□□□□ 0.51
HLA-C-204ENST00000415537 LY6G6CO95867 125 aa18.25■□□□□ 0.51
HLA-C-204ENST00000415537 RPP30P78346 268 aaKnown RBP18.25■□□□□ 0.51
HLA-C-204ENST00000415537 C11orf45Q8TAV5 145 aa18.25■□□□□ 0.51
HLA-C-204ENST00000415537 PHLDA1Q8WV24 401 aaPredicted RBP18.25■□□□□ 0.51
HLA-C-204ENST00000415537 CIB3Q96Q77 187 aaPredicted RBP18.25■□□□□ 0.51
HLA-C-204ENST00000415537 MFFQ9GZY8 342 aa18.25■□□□□ 0.51
HLA-C-204ENST00000415537 NRN1Q9NPD7 142 aa18.25■□□□□ 0.51
HLA-C-204ENST00000415537 HOXB5P09067 269 aa18.24■□□□□ 0.51
HLA-C-204ENST00000415537 SRRQ9GZT4 340 aa18.24■□□□□ 0.51
HLA-C-204ENST00000415537 ZNF90Q03938 601 aa18.23■□□□□ 0.51
HLA-C-204ENST00000415537 TRIQKQ629K1 86 aa18.23■□□□□ 0.51
HLA-C-204ENST00000415537 OR8G2PQ6IF36 304 aa18.23■□□□□ 0.51
HLA-C-204ENST00000415537 RAB40CQ96S21 281 aa18.23■□□□□ 0.51
HLA-C-204ENST00000415537 PLECQ15149 4684 aaKnown RBP18.22■□□□□ 0.51
HLA-C-204ENST00000415537 DEFB4AO15263 64 aa18.22■□□□□ 0.51
HLA-C-204ENST00000415537 SYNGR2O43760 224 aa18.22■□□□□ 0.51
HLA-C-204ENST00000415537 UBE2MP61081 183 aaKnown RBP18.22■□□□□ 0.51
HLA-C-204ENST00000415537 SEPSECSQ9HD40 501 aaKnown RBP18.22■□□□□ 0.51
HLA-C-204ENST00000415537 FBXL17Q9UF56 701 aa18.22■□□□□ 0.51
HLA-C-204ENST00000415537 IGKV1D-37A0A075B6S9 117 aa18.21■□□□□ 0.51
HLA-C-204ENST00000415537 NAP1L6A6NFF2 107 aa18.21■□□□□ 0.51
HLA-C-204ENST00000415537 SNRPGP15A8MWD9 76 aa18.21■□□□□ 0.51
HLA-C-204ENST00000415537 WRBO00258 174 aa18.21■□□□□ 0.51
HLA-C-204ENST00000415537 NANOS2P60321 138 aaKnown RBP18.21■□□□□ 0.51
HLA-C-204ENST00000415537 LYZP61626 148 aa18.21■□□□□ 0.51
HLA-C-204ENST00000415537 GGNBP1Q5YKI7 109 aa18.21■□□□□ 0.51
HLA-C-204ENST00000415537 MAGT1Q9H0U3 335 aa18.21■□□□□ 0.51
HLA-C-204ENST00000415537 GIG44P09565 113 aaPredicted RBP18.2■□□□□ 0.5
HLA-C-204ENST00000415537 PPP1R14BQ96C90 147 aa18.2■□□□□ 0.5
HLA-C-204ENST00000415537 ALMS1Q8TCU4 4167 aa18.2■□□□□ 0.5
HLA-C-204ENST00000415537 C4BPBP20851 252 aa18.19■□□□□ 0.5
HLA-C-204ENST00000415537 NUTF2P61970 127 aaKnown RBP18.19■□□□□ 0.5
HLA-C-204ENST00000415537 BAK1Q16611 211 aa18.19■□□□□ 0.5
HLA-C-204ENST00000415537 TRGV9Q99603 122 aa18.19■□□□□ 0.5
HLA-C-204ENST00000415537 C9orf170A2RU37 121 aa18.18■□□□□ 0.5
HLA-C-204ENST00000415537 OR2F1Q13607 317 aa18.18■□□□□ 0.5
HLA-C-204ENST00000415537 SPANXN5Q5MJ07 72 aa18.18■□□□□ 0.5
HLA-C-204ENST00000415537 CLEC5AQ9NY25 188 aa18.18■□□□□ 0.5
HLA-C-204ENST00000415537 CENPXA8MT69 81 aa18.17■□□□□ 0.5
HLA-C-204ENST00000415537 NDUFB6O95139 128 aa18.17■□□□□ 0.5
HLA-C-204ENST00000415537 MIFP14174 115 aa18.17■□□□□ 0.5
HLA-C-204ENST00000415537 COQ8AQ8NI60 647 aa18.17■□□□□ 0.5
HLA-C-204ENST00000415537 LINC00854A0A1B0GVQ3 168 aa18.16■□□□□ 0.5
HLA-C-204ENST00000415537 C1orf194Q5T5A4 169 aa18.16■□□□□ 0.5
HLA-C-204ENST00000415537 THAP8Q8NA92 274 aa18.16■□□□□ 0.5
HLA-C-204ENST00000415537 Q8NAQ8 132 aa18.16■□□□□ 0.5
HLA-C-204ENST00000415537 C1QTNF4Q9BXJ3 329 aa18.16■□□□□ 0.5
HLA-C-204ENST00000415537 STRAPQ9Y3F4 350 aaKnown RBP18.16■□□□□ 0.5
HLA-C-204ENST00000415537 IGHV4-28A0A0C4DH34 117 aa18.15■□□□□ 0.5
HLA-C-204ENST00000415537 ADAP1O75689 374 aa18.15■□□□□ 0.5
HLA-C-204ENST00000415537 CFDP00746 253 aaPredicted RBP18.15■□□□□ 0.5
HLA-C-204ENST00000415537 IFNA21P01568 189 aa18.15■□□□□ 0.5
HLA-C-204ENST00000415537 ID1P41134 155 aa18.15■□□□□ 0.5
HLA-C-204ENST00000415537 NKX2-1P43699 371 aaPredicted RBP18.15■□□□□ 0.5
HLA-C-204ENST00000415537 TBC1D24Q9ULP9 559 aa18.15■□□□□ 0.5
HLA-C-204ENST00000415537 FLVCR2Q9UPI3 526 aa18.15■□□□□ 0.5
HLA-C-204ENST00000415537 IGKV1OR2-108A0A075B7D4 117 aa18.14■□□□□ 0.49
HLA-C-204ENST00000415537 ZNF705EA8MWA4 302 aaPredicted RBP18.14■□□□□ 0.49
HLA-C-204ENST00000415537 H3BMM0 161 aa18.14■□□□□ 0.49
HLA-C-204ENST00000415537 OR8I2Q8N0Y5 310 aa18.14■□□□□ 0.49
HLA-C-204ENST00000415537 LINC00052Q96N35 136 aa18.14■□□□□ 0.49
HLA-C-204ENST00000415537 H3BP45 60 aa18.13■□□□□ 0.49
HLA-C-204ENST00000415537 OR4E1P0C645 316 aa18.13■□□□□ 0.49
HLA-C-204ENST00000415537 AKR1C1Q04828 323 aa18.13■□□□□ 0.49
HLA-C-204ENST00000415537 PRSS46E5RG02 174 aa18.12■□□□□ 0.49
HLA-C-204ENST00000415537 RBMY1A1P0DJD3 496 aaKnown RBP18.12■□□□□ 0.49
HLA-C-204ENST00000415537 RBMY1CP0DJD4 496 aa18.12■□□□□ 0.49
HLA-C-204ENST00000415537 HLA-DRB4P13762 266 aa18.12■□□□□ 0.49
HLA-C-204ENST00000415537 ID3Q02535 119 aa18.12■□□□□ 0.49
HLA-C-204ENST00000415537 RBMY1FQ15415 496 aaKnown RBP18.12■□□□□ 0.49
HLA-C-204ENST00000415537 C4orf46Q504U0 113 aa18.12■□□□□ 0.49
HLA-C-204ENST00000415537 CSNK1G2-AS1Q8NCQ2 148 aa18.12■□□□□ 0.49
HLA-C-204ENST00000415537 C2CD4CQ8TF44 421 aa18.12■□□□□ 0.49
HLA-C-204ENST00000415537 C7orf50Q9BRJ6 194 aaKnown RBP18.12■□□□□ 0.49
HLA-C-204ENST00000415537 WDR12Q9GZL7 423 aaKnown RBP18.12■□□□□ 0.49
HLA-C-204ENST00000415537 HRH4Q9H3N8 390 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms