RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 TMEM190Q8WZ59 177 aa11.62□□□□□ -0.55
LSM5-207ENST00000410044 PUS1Q9Y606 427 aaKnown RBP eCLIP11.62□□□□□ -0.55
LSM5-207ENST00000410044 WNK1Q9H4A3 2382 aa11.62□□□□□ -0.55
LSM5-207ENST00000410044 IGHV3-35A0A0C4DH35 117 aa11.61□□□□□ -0.55
LSM5-207ENST00000410044 OVOL1O14753 267 aa11.61□□□□□ -0.55
LSM5-207ENST00000410044 PFDN1O60925 122 aa11.61□□□□□ -0.55
LSM5-207ENST00000410044 FGF7P21781 194 aa11.61□□□□□ -0.55
LSM5-207ENST00000410044 RPL29P47914 159 aaKnown RBP11.61□□□□□ -0.55
LSM5-207ENST00000410044 SYNJ2BPP57105 145 aa11.61□□□□□ -0.55
LSM5-207ENST00000410044 PLP1P60201 277 aa11.61□□□□□ -0.55
LSM5-207ENST00000410044 OPCMLQ14982 345 aa11.61□□□□□ -0.55
LSM5-207ENST00000410044 UNQ9165/PRO28630Q6UXU0 137 aa11.61□□□□□ -0.55
LSM5-207ENST00000410044 TMEM182Q6ZP80 229 aaPredicted RBP11.61□□□□□ -0.55
LSM5-207ENST00000410044 RCC1LQ96I51 464 aaKnown RBP11.61□□□□□ -0.55
LSM5-207ENST00000410044 GGTLC1Q9BX51 225 aa11.61□□□□□ -0.55
LSM5-207ENST00000410044 CYTL1Q9NRR1 136 aa11.61□□□□□ -0.55
LSM5-207ENST00000410044 LINC00869P0C866 280 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 C8orf88P0DMB2 117 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 CAMLGP49069 296 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 PRR20EP86478 221 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 PRR20CP86479 221 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 PRR20DP86480 221 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 PRR20BP86481 221 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 PRR20AP86496 221 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 IL34Q6ZMJ4 242 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 TMUB2Q71RG4 321 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 BPIFCQ8NFQ6 507 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 OR9G4Q8NGQ1 327 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 SCGB1C1Q8TD33 95 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 NPCDR1Q9BY65 106 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 SIGLEC8Q9NYZ4 499 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 PEMTQ9UBM1 199 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 UFC1Q9Y3C8 167 aa11.6□□□□□ -0.55
LSM5-207ENST00000410044 BORCS7-ASMTA0A0B4J1R7 106 aa11.59□□□□□ -0.55
LSM5-207ENST00000410044 ZNF320A2RRD8 509 aa11.59□□□□□ -0.55
LSM5-207ENST00000410044 JTBO76095 146 aa11.59□□□□□ -0.55
LSM5-207ENST00000410044 PRR31Q5SQ13 230 aa11.59□□□□□ -0.55
LSM5-207ENST00000410044 PXDC1Q5TGL8 231 aa11.59□□□□□ -0.55
LSM5-207ENST00000410044 LAMTOR1Q6IAA8 161 aa11.59□□□□□ -0.55
LSM5-207ENST00000410044 ARPC5LQ9BPX5 153 aa11.59□□□□□ -0.55
LSM5-207ENST00000410044 GINS3Q9BRX5 216 aa11.59□□□□□ -0.55
LSM5-207ENST00000410044 ARV1Q9H2C2 271 aa11.59□□□□□ -0.55
LSM5-207ENST00000410044 TMEM213A2RRL7 107 aa11.58□□□□□ -0.56
LSM5-207ENST00000410044 YIF1AO95070 293 aa11.58□□□□□ -0.56
LSM5-207ENST00000410044 IL4P05112 153 aa11.58□□□□□ -0.56
LSM5-207ENST00000410044 CSN3P07498 182 aa11.58□□□□□ -0.56
LSM5-207ENST00000410044 GATA2P23769 480 aaPredicted RBP11.58□□□□□ -0.56
LSM5-207ENST00000410044 RPL7L1Q6DKI1 246 aaKnown RBP11.58□□□□□ -0.56
LSM5-207ENST00000410044 C9orf62Q8N4C0 152 aa11.58□□□□□ -0.56
LSM5-207ENST00000410044 MARC2Q969Z3 335 aa11.58□□□□□ -0.56
LSM5-207ENST00000410044 RNF125Q96EQ8 232 aa11.58□□□□□ -0.56
LSM5-207ENST00000410044 ARL6Q9H0F7 186 aa11.58□□□□□ -0.56
LSM5-207ENST00000410044 DAZ1Q9NQZ3 744 aaKnown RBP11.58□□□□□ -0.56
LSM5-207ENST00000410044 MRPL27Q9P0M9 148 aaKnown RBP11.58□□□□□ -0.56
LSM5-207ENST00000410044 TIMM9Q9Y5J7 89 aa11.58□□□□□ -0.56
LSM5-207ENST00000410044 U3KQE9 123 aa11.58□□□□□ -0.56
LSM5-207ENST00000410044 KANTRA0A1W2PQU2 76 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 C2orf70A6NJV1 201 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 C17orf112F2Z3M2 114 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 BCL2L11O43521 198 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 CBLN1P23435 193 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 CRYBB3P26998 211 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 USF2Q15853 346 aaPredicted RBP11.57□□□□□ -0.56
LSM5-207ENST00000410044 TM4SF20Q53R12 229 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 ZNF709Q8N972 641 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 MCRIP2Q9BUT9 160 aaKnown RBP11.57□□□□□ -0.56
LSM5-207ENST00000410044 C20orf24Q9BUV8 137 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 ELOVL1Q9BW60 279 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 KCNIP2Q9NS61 270 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 SLC39A9Q9NUM3 307 aa11.57□□□□□ -0.56
LSM5-207ENST00000410044 ANK2Q01484 3957 aa11.56□□□□□ -0.56
LSM5-207ENST00000410044 CD33P20138 364 aa11.56□□□□□ -0.56
LSM5-207ENST00000410044 NPPCP23582 126 aa11.56□□□□□ -0.56
LSM5-207ENST00000410044 MIC13Q5XKP0 118 aa11.56□□□□□ -0.56
LSM5-207ENST00000410044 ADAMTSL5Q6ZMM2 481 aa11.56□□□□□ -0.56
LSM5-207ENST00000410044 Q6ZRG5 221 aa11.56□□□□□ -0.56
LSM5-207ENST00000410044 STPG3Q8N7X2 389 aa11.56□□□□□ -0.56
LSM5-207ENST00000410044 PSMG3Q9BT73 122 aaPredicted RBP11.56□□□□□ -0.56
LSM5-207ENST00000410044 SMPXQ9UHP9 88 aa11.56□□□□□ -0.56
LSM5-207ENST00000410044 PXMP4Q9Y6I8 212 aa11.56□□□□□ -0.56
LSM5-207ENST00000410044 ELOA3CA0A087WX78 387 aaPredicted RBP11.55□□□□□ -0.56
LSM5-207ENST00000410044 IGHV7-4-1A0A0J9YVY3 117 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 HNRNPCP07910 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
LSM5-207ENST00000410044 FOLR2P14207 255 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 ATP6V0CP27449 155 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 INSL3P51460 131 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 LYZP61626 148 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 B2MP61769 119 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 PATE2Q6UY27 113 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 OR2G3Q8NGZ4 309 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 PPP1R14BQ96C90 147 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 GNPNAT1Q96EK6 184 aaPredicted RBP11.55□□□□□ -0.56
LSM5-207ENST00000410044 METTL26Q96S19 204 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 RSG1Q9BU20 258 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 VSIRQ9H7M9 311 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 RABAC1Q9UI14 185 aa11.55□□□□□ -0.56
LSM5-207ENST00000410044 IGHV3OR16-8A0A075B7F1 116 aa11.54□□□□□ -0.56
LSM5-207ENST00000410044 WIPF1O43516 503 aa11.54□□□□□ -0.56
LSM5-207ENST00000410044 BUB3O43684 328 aa11.54□□□□□ -0.56
LSM5-207ENST00000410044 HYPMO75409 117 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms