RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 IGHV3-66A0A0C4DH42 116 aa10.69□□□□□ -0.7
NIF3L1-205ENST00000409588 A0A0J9YWU9 116 aa10.69□□□□□ -0.7
NIF3L1-205ENST00000409588 CFDP00746 253 aaPredicted RBP10.69□□□□□ -0.7
NIF3L1-205ENST00000409588 INPP1P49441 399 aa10.69□□□□□ -0.7
NIF3L1-205ENST00000409588 DEFB131AP59861 70 aa10.69□□□□□ -0.7
NIF3L1-205ENST00000409588 CNPY1Q3B7I2 92 aa10.69□□□□□ -0.7
NIF3L1-205ENST00000409588 MORN3Q6PF18 240 aaPredicted RBP10.69□□□□□ -0.7
NIF3L1-205ENST00000409588 C16orf54Q6UWD8 224 aa10.69□□□□□ -0.7
NIF3L1-205ENST00000409588 CENPSQ8N2Z9 138 aa10.69□□□□□ -0.7
NIF3L1-205ENST00000409588 OR51G1Q8NGK1 321 aa10.69□□□□□ -0.7
NIF3L1-205ENST00000409588 CENPXA8MT69 81 aa10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 BUB3O43684 328 aa10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 SFT2D2O95562 160 aa10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 IL4P05112 153 aa10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 SPP1P10451 314 aa10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 VAMP1P23763 118 aa10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 OR8G2PQ6IF36 304 aa10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 STXBP6Q8NFX7 210 aa10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 ACY3Q96HD9 319 aa10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 NDUFA13Q9P0J0 144 aa10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 KLK5Q9Y337 293 aaPredicted RBP10.68□□□□□ -0.7
NIF3L1-205ENST00000409588 DYNC2H1Q8NCM8 4307 aaKnown RBP10.67□□□□□ -0.7
NIF3L1-205ENST00000409588 SNRPGP15A8MWD9 76 aa10.67□□□□□ -0.7
NIF3L1-205ENST00000409588 PSG1P11464 419 aa10.67□□□□□ -0.7
NIF3L1-205ENST00000409588 S100A7P31151 101 aa10.67□□□□□ -0.7
NIF3L1-205ENST00000409588 SNRPD3P62318 126 aaKnown RBP10.67□□□□□ -0.7
NIF3L1-205ENST00000409588 GAMTQ14353 236 aa10.67□□□□□ -0.7
NIF3L1-205ENST00000409588 C1orf194Q5T5A4 169 aa10.67□□□□□ -0.7
NIF3L1-205ENST00000409588 SLC35E1Q96K37 410 aa10.67□□□□□ -0.7
NIF3L1-205ENST00000409588 MFFQ9GZY8 342 aa10.67□□□□□ -0.7
NIF3L1-205ENST00000409588 PRR13Q9NZ81 148 aa10.67□□□□□ -0.7
NIF3L1-205ENST00000409588 CXorf65A6NEN9 183 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 ZFP92A6NM28 416 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 SYNGR2O43760 224 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 NXPH3O95157 252 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 CA1P00915 261 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 NUTF2P61970 127 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 DHRS2Q13268 280 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 ZNF124Q15973 351 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 TRIQKQ629K1 86 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 CEMP1Q6PRD7 247 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 OR11H2Q8NH07 326 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 GLMPQ8WWB7 406 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 RNF125Q96EQ8 232 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 C7orf50Q9BRJ6 194 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 SRRQ9GZT4 340 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 C11orf68Q9H3H3 251 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 NRN1Q9NPD7 142 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 FBXL17Q9UF56 701 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 LYSTQ99698 3801 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 STARD9Q9P2P6 4700 aa10.66□□□□□ -0.7
NIF3L1-205ENST00000409588 PPP1R1AQ13522 171 aa10.65□□□□□ -0.7
NIF3L1-205ENST00000409588 USF2Q15853 346 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-205ENST00000409588 SAMD13Q5VXD3 122 aa10.65□□□□□ -0.7
NIF3L1-205ENST00000409588 GGNBP1Q5YKI7 109 aa10.65□□□□□ -0.7
NIF3L1-205ENST00000409588 LEMD1Q68G75 181 aa10.65□□□□□ -0.7
NIF3L1-205ENST00000409588 SIGLEC15Q6ZMC9 328 aa10.65□□□□□ -0.7
NIF3L1-205ENST00000409588 TRPT1Q86TN4 253 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-205ENST00000409588 TRGV9Q99603 122 aa10.65□□□□□ -0.7
NIF3L1-205ENST00000409588 NDUFB6O95139 128 aa10.64□□□□□ -0.71
NIF3L1-205ENST00000409588 IFNA21P01568 189 aa10.64□□□□□ -0.71
NIF3L1-205ENST00000409588 COQ8AQ8NI60 647 aa10.64□□□□□ -0.71
NIF3L1-205ENST00000409588 C1QTNF4Q9BXJ3 329 aa10.64□□□□□ -0.71
NIF3L1-205ENST00000409588 ZNF688P0C7X2 276 aa10.63□□□□□ -0.71
NIF3L1-205ENST00000409588 ID1P41134 155 aa10.63□□□□□ -0.71
NIF3L1-205ENST00000409588 ID3Q02535 119 aa10.63□□□□□ -0.71
NIF3L1-205ENST00000409588 FAM24BQ8N5W8 94 aa10.63□□□□□ -0.71
NIF3L1-205ENST00000409588 RAB40CQ96S21 281 aa10.63□□□□□ -0.71
NIF3L1-205ENST00000409588 SLC45A2Q9UMX9 530 aa10.63□□□□□ -0.71
NIF3L1-205ENST00000409588 C9orf170A2RU37 121 aa10.62□□□□□ -0.71
NIF3L1-205ENST00000409588 HOXB5P09067 269 aa10.62□□□□□ -0.71
NIF3L1-205ENST00000409588 MIFP14174 115 aa10.62□□□□□ -0.71
NIF3L1-205ENST00000409588 TCTAP57738 103 aa10.62□□□□□ -0.71
NIF3L1-205ENST00000409588 BAK1Q16611 211 aa10.62□□□□□ -0.71
NIF3L1-205ENST00000409588 THAP8Q8NA92 274 aa10.62□□□□□ -0.71
NIF3L1-205ENST00000409588 C11orf45Q8TAV5 145 aa10.62□□□□□ -0.71
NIF3L1-205ENST00000409588 HRH4Q9H3N8 390 aa10.62□□□□□ -0.71
NIF3L1-205ENST00000409588 STRAPQ9Y3F4 350 aaKnown RBP10.62□□□□□ -0.71
NIF3L1-205ENST00000409588 RYR2Q92736 4967 aa10.61□□□□□ -0.71
NIF3L1-205ENST00000409588 SACSQ9NZJ4 4579 aa10.61□□□□□ -0.71
NIF3L1-205ENST00000409588 IGKV1D-37A0A075B6S9 117 aa10.61□□□□□ -0.71
NIF3L1-205ENST00000409588 OR4E1P0C645 316 aa10.61□□□□□ -0.71
NIF3L1-205ENST00000409588 NKX2-1P43699 371 aaPredicted RBP10.61□□□□□ -0.71
NIF3L1-205ENST00000409588 PMS2P11Q13670 270 aa10.61□□□□□ -0.71
NIF3L1-205ENST00000409588 PSMG4Q5JS54 123 aa10.61□□□□□ -0.71
NIF3L1-205ENST00000409588 ACTL10Q5JWF8 245 aa10.61□□□□□ -0.71
NIF3L1-205ENST00000409588 SPATA31B1PQ5VZV4 182 aa10.61□□□□□ -0.71
NIF3L1-205ENST00000409588 PBDC1Q9BVG4 233 aa10.61□□□□□ -0.71
NIF3L1-205ENST00000409588 WRBO00258 174 aa10.6□□□□□ -0.71
NIF3L1-205ENST00000409588 IAPPP10997 89 aa10.6□□□□□ -0.71
NIF3L1-205ENST00000409588 MEOX2P50222 304 aa10.6□□□□□ -0.71
NIF3L1-205ENST00000409588 EWSR1Q01844 656 aaKnown RBP eCLIP10.6□□□□□ -0.71
NIF3L1-205ENST00000409588 ZNF90Q03938 601 aa10.6□□□□□ -0.71
NIF3L1-205ENST00000409588 LINC00299Q6ZSB3 139 aa10.6□□□□□ -0.71
NIF3L1-205ENST00000409588 S100A7AQ86SG5 101 aa10.6□□□□□ -0.71
NIF3L1-205ENST00000409588 OR4D5Q8NGN0 318 aa10.6□□□□□ -0.71
NIF3L1-205ENST00000409588 PHLDA1Q8WV24 401 aaPredicted RBP10.6□□□□□ -0.71
NIF3L1-205ENST00000409588 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
NIF3L1-205ENST00000409588 PAIP2BQ9ULR5 123 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms