RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 DNAH1Q9P2D7 4330 aa14.37□□□□□ -0.11
TSPAN4-209ENST00000409543 C9orf170A2RU37 121 aa14.37□□□□□ -0.11
TSPAN4-209ENST00000409543 ZFP92A6NM28 416 aa14.37□□□□□ -0.11
TSPAN4-209ENST00000409543 CA1P00915 261 aaPredicted RBP14.37□□□□□ -0.11
TSPAN4-209ENST00000409543 ZNF688P0C7X2 276 aa14.37□□□□□ -0.11
TSPAN4-209ENST00000409543 DHRS2Q13268 280 aa14.37□□□□□ -0.11
TSPAN4-209ENST00000409543 GGNBP1Q5YKI7 109 aa14.37□□□□□ -0.11
TSPAN4-209ENST00000409543 RNF125Q96EQ8 232 aa14.37□□□□□ -0.11
TSPAN4-209ENST00000409543 SDHCQ99643 169 aaPredicted RBP14.37□□□□□ -0.11
TSPAN4-209ENST00000409543 RARRES2Q99969 163 aa14.37□□□□□ -0.11
TSPAN4-209ENST00000409543 IGKV1D-37A0A075B6S9 117 aa14.36□□□□□ -0.11
TSPAN4-209ENST00000409543 CXorf65A6NEN9 183 aa14.36□□□□□ -0.11
TSPAN4-209ENST00000409543 SYNGR2O43760 224 aa14.36□□□□□ -0.11
TSPAN4-209ENST00000409543 FABP1P07148 127 aa14.36□□□□□ -0.11
TSPAN4-209ENST00000409543 RPP30P78346 268 aaKnown RBP14.36□□□□□ -0.11
TSPAN4-209ENST00000409543 OR8G2PQ6IF36 304 aa14.36□□□□□ -0.11
TSPAN4-209ENST00000409543 NDUFA13Q9P0J0 144 aa14.36□□□□□ -0.11
TSPAN4-209ENST00000409543 PFDN2Q9UHV9 154 aa14.36□□□□□ -0.11
TSPAN4-209ENST00000409543 CENPXA8MT69 81 aa14.35□□□□□ -0.11
TSPAN4-209ENST00000409543 NUP62P37198 522 aaPredicted RBP14.35□□□□□ -0.11
TSPAN4-209ENST00000409543 ZNF90Q03938 601 aa14.35□□□□□ -0.11
TSPAN4-209ENST00000409543 PMS2P11Q13670 270 aa14.35□□□□□ -0.11
TSPAN4-209ENST00000409543 TRPT1Q86TN4 253 aaKnown RBP14.35□□□□□ -0.11
TSPAN4-209ENST00000409543 OR11H2Q8NH07 326 aa14.35□□□□□ -0.11
TSPAN4-209ENST00000409543 C7orf50Q9BRJ6 194 aaKnown RBP14.35□□□□□ -0.11
TSPAN4-209ENST00000409543 MAGT1Q9H0U3 335 aa14.35□□□□□ -0.11
TSPAN4-209ENST00000409543 FLVCR2Q9UPI3 526 aa14.35□□□□□ -0.11
TSPAN4-209ENST00000409543 LINC00854A0A1B0GVQ3 168 aa14.34□□□□□ -0.11
TSPAN4-209ENST00000409543 NUPR2A6NF83 97 aa14.34□□□□□ -0.11
TSPAN4-209ENST00000409543 WRBO00258 174 aa14.34□□□□□ -0.11
TSPAN4-209ENST00000409543 MORN3Q6PF18 240 aaPredicted RBP14.34□□□□□ -0.11
TSPAN4-209ENST00000409543 SIGLEC15Q6ZMC9 328 aa14.34□□□□□ -0.11
TSPAN4-209ENST00000409543 COQ8AQ8NI60 647 aa14.34□□□□□ -0.11
TSPAN4-209ENST00000409543 TRGV9Q99603 122 aa14.34□□□□□ -0.11
TSPAN4-209ENST00000409543 PBDC1Q9BVG4 233 aa14.34□□□□□ -0.11
TSPAN4-209ENST00000409543 SEPSECSQ9HD40 501 aaKnown RBP14.34□□□□□ -0.11
TSPAN4-209ENST00000409543 NRN1Q9NPD7 142 aa14.34□□□□□ -0.11
TSPAN4-209ENST00000409543 PAIP2BQ9ULR5 123 aaKnown RBP14.34□□□□□ -0.11
TSPAN4-209ENST00000409543 KNCNA6PVL3 124 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 SNRPGP15A8MWD9 76 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 ADAP1O75689 374 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 OR4E1P0C645 316 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 SPP1P10451 314 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 IL7P13232 177 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 BTCP35070 178 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 ID3Q02535 119 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 TMEM41BQ5BJD5 291 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 PSMG4Q5JS54 123 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 THAP8Q8NA92 274 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 RAB40CQ96S21 281 aa14.33□□□□□ -0.12
TSPAN4-209ENST00000409543 PLECQ15149 4684 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-209ENST00000409543 AGRNO00468 2067 aa14.32□□□□□ -0.12
TSPAN4-209ENST00000409543 PRSS46E5RG02 174 aa14.32□□□□□ -0.12
TSPAN4-209ENST00000409543 GIG44P09565 113 aaPredicted RBP14.32□□□□□ -0.12
TSPAN4-209ENST00000409543 SNRPD3P62318 126 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-209ENST00000409543 CNPY1Q3B7I2 92 aa14.32□□□□□ -0.12
TSPAN4-209ENST00000409543 ACTL10Q5JWF8 245 aa14.32□□□□□ -0.12
TSPAN4-209ENST00000409543 CEMP1Q6PRD7 247 aaPredicted RBP14.32□□□□□ -0.12
TSPAN4-209ENST00000409543 C11orf68Q9H3H3 251 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-209ENST00000409543 IGKV1OR2-108A0A075B7D4 117 aa14.31□□□□□ -0.12
TSPAN4-209ENST00000409543 IFNA21P01568 189 aa14.31□□□□□ -0.12
TSPAN4-209ENST00000409543 SPANXN5Q5MJ07 72 aa14.31□□□□□ -0.12
TSPAN4-209ENST00000409543 C1orf194Q5T5A4 169 aa14.31□□□□□ -0.12
TSPAN4-209ENST00000409543 STRAPQ9Y3F4 350 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-209ENST00000409543 CFDP00746 253 aaPredicted RBP14.3□□□□□ -0.12
TSPAN4-209ENST00000409543 ANXA7P20073 488 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-209ENST00000409543 LYZP61626 148 aa14.3□□□□□ -0.12
TSPAN4-209ENST00000409543 OR2F1Q13607 317 aa14.3□□□□□ -0.12
TSPAN4-209ENST00000409543 C4orf46Q504U0 113 aa14.3□□□□□ -0.12
TSPAN4-209ENST00000409543 FBXL17Q9UF56 701 aa14.3□□□□□ -0.12
TSPAN4-209ENST00000409543 POLR2GP62487 172 aaKnown RBP eCLIP14.29□□□□□ -0.12
TSPAN4-209ENST00000409543 OR4D5Q8NGN0 318 aa14.29□□□□□ -0.12
TSPAN4-209ENST00000409543 KLK5Q9Y337 293 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-209ENST00000409543 H3BP45 60 aa14.28□□□□□ -0.12
TSPAN4-209ENST00000409543 PLA2G10O15496 165 aa14.28□□□□□ -0.12
TSPAN4-209ENST00000409543 C4BPBP20851 252 aa14.28□□□□□ -0.12
TSPAN4-209ENST00000409543 NKX2-1P43699 371 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-209ENST00000409543 ALMS1Q8TCU4 4167 aa14.28□□□□□ -0.12
TSPAN4-209ENST00000409543 HYDINQ4G0P3 5121 aa14.27□□□□□ -0.12
TSPAN4-209ENST00000409543 C11orf45Q8TAV5 145 aa14.27□□□□□ -0.13
TSPAN4-209ENST00000409543 PHLDA1Q8WV24 401 aaPredicted RBP14.27□□□□□ -0.13
TSPAN4-209ENST00000409543 MITD1Q8WV92 249 aa14.27□□□□□ -0.13
TSPAN4-209ENST00000409543 PPP1R14BQ96C90 147 aa14.27□□□□□ -0.13
TSPAN4-209ENST00000409543 MFFQ9GZY8 342 aa14.27□□□□□ -0.13
TSPAN4-209ENST00000409543 PSENENQ9NZ42 101 aa14.27□□□□□ -0.13
TSPAN4-209ENST00000409543 H3BMM0 161 aa14.26□□□□□ -0.13
TSPAN4-209ENST00000409543 ACOT7LQ6ZUV0 252 aa14.26□□□□□ -0.13
TSPAN4-209ENST00000409543 Q8NAQ8 132 aa14.26□□□□□ -0.13
TSPAN4-209ENST00000409543 CSNK1G2-AS1Q8NCQ2 148 aa14.26□□□□□ -0.13
TSPAN4-209ENST00000409543 LINC00476Q8WZB0 136 aa14.26□□□□□ -0.13
TSPAN4-209ENST00000409543 SMIM8Q96KF7 97 aa14.26□□□□□ -0.13
TSPAN4-209ENST00000409543 SLC45A2Q9UMX9 530 aa14.26□□□□□ -0.13
TSPAN4-209ENST00000409543 ZNF705EA8MWA4 302 aaPredicted RBP14.25□□□□□ -0.13
TSPAN4-209ENST00000409543 DEFB4AO15263 64 aa14.25□□□□□ -0.13
TSPAN4-209ENST00000409543 LYRM1O43325 122 aa14.25□□□□□ -0.13
TSPAN4-209ENST00000409543 SSSCA1O60232 199 aa14.25□□□□□ -0.13
TSPAN4-209ENST00000409543 ID1P41134 155 aa14.25□□□□□ -0.13
TSPAN4-209ENST00000409543 NUTF2P61970 127 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-209ENST00000409543 AKR1C1Q04828 323 aa14.25□□□□□ -0.13
TSPAN4-209ENST00000409543 TMEM144Q7Z5S9 345 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms