RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 WDR61Q9GZS3 305 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 WFDC1Q9HC57 220 aa12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 KCNIP2Q9NS61 270 aa12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 C17orf112F2Z3M2 114 aa12.66□□□□□ -0.38
TSPAN4-208ENST00000409531 AGPAT2O15120 278 aa12.66□□□□□ -0.38
TSPAN4-208ENST00000409531 BCL2L11O43521 198 aa12.66□□□□□ -0.38
TSPAN4-208ENST00000409531 OR2C1O95371 312 aa12.66□□□□□ -0.38
TSPAN4-208ENST00000409531 CAMLGP49069 296 aa12.66□□□□□ -0.38
TSPAN4-208ENST00000409531 LGALSLQ3ZCW2 172 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-208ENST00000409531 CYP2G1PQ6ZSU1 146 aa12.66□□□□□ -0.38
TSPAN4-208ENST00000409531 ZNF709Q8N972 641 aa12.66□□□□□ -0.38
TSPAN4-208ENST00000409531 BPIFCQ8NFQ6 507 aa12.66□□□□□ -0.38
TSPAN4-208ENST00000409531 ZNF90Q03938 601 aa12.65□□□□□ -0.38
TSPAN4-208ENST00000409531 C1QL4Q86Z23 238 aa12.65□□□□□ -0.38
TSPAN4-208ENST00000409531 OR51G1Q8NGK1 321 aa12.65□□□□□ -0.38
TSPAN4-208ENST00000409531 DUX3Q96PT4 197 aa12.65□□□□□ -0.38
TSPAN4-208ENST00000409531 MGST2Q99735 147 aa12.65□□□□□ -0.38
TSPAN4-208ENST00000409531 NPCDR1Q9BY65 106 aa12.65□□□□□ -0.38
TSPAN4-208ENST00000409531 PUS1Q9Y606 427 aaKnown RBP eCLIP12.65□□□□□ -0.38
TSPAN4-208ENST00000409531 IGHV3-35A0A0C4DH35 117 aa12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 YIF1AO95070 293 aa12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 HNRNPCP07910 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 PSG1P11464 419 aa12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 CD33P20138 364 aa12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 SLURP1P55000 103 aa12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 EIF5AP63241 154 aaKnown RBP12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 DEFA6Q01524 100 aa12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 KLF5Q13887 457 aaPredicted RBP12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 RPL7L1Q6DKI1 246 aaKnown RBP12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 C9orf62Q8N4C0 152 aa12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 GINS3Q9BRX5 216 aa12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 GGTLC1Q9BX51 225 aa12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 CMYA5Q8N3K9 4069 aa12.64□□□□□ -0.39
TSPAN4-208ENST00000409531 ZNF320A2RRD8 509 aa12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 G3V4G9 280 aa12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 LGALS9O00182 355 aa12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 RPL29P47914 159 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 NKX2-5P52952 324 aaPredicted RBP12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 OPCMLQ14982 345 aa12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 PXDC1Q5TGL8 231 aa12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 REC114Q7Z4M0 266 aa12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 TMEM190Q8WZ59 177 aa12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 ZNF471Q9BX82 626 aaPredicted RBP12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 PEMTQ9UBM1 199 aa12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 SLC45A2Q9UMX9 530 aa12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 UFC1Q9Y3C8 167 aa12.63□□□□□ -0.39
TSPAN4-208ENST00000409531 IL4P05112 153 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 SYNJ2BPP57105 145 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 OXLD1Q5BKU9 147 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 SAMD5Q5TGI4 173 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 TOMM20LQ6UXN7 152 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 Q6ZRG5 221 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 HSD17B11Q8NBQ5 300 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 GNPNAT1Q96EK6 184 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 RNF125Q96EQ8 232 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 CYTL1Q9NRR1 136 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 TIMM9Q9Y5J7 89 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 WI2-2373I1.2A0A1W2PRP0 233 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 BOLA2-SMG1P6H3BVE0 249 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 LINC00869P0C866 280 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 S100A7P31151 101 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 ELLP55199 621 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 B2MP61769 119 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 LAMTOR1Q6IAA8 161 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 STPG3Q8N7X2 389 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 LINC00482Q8N8I6 264 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 DLX4Q92988 240 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 RCC1LQ96I51 464 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 PSMG3Q9BT73 122 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 RSG1Q9BU20 258 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 C20orf24Q9BUV8 137 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 ZFAND3Q9H8U3 227 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 DAZ1Q9NQZ3 744 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 PFDN2Q9UHV9 154 aa12.62□□□□□ -0.39
TSPAN4-208ENST00000409531 A8MWP6 167 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 K7EMT4 169 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 OVOL1O14753 267 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 GATA2P23769 480 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 PLP1P60201 277 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 LYZP61626 148 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 PRR20EP86478 221 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 PRR20CP86479 221 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 PRR20DP86480 221 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 PRR20BP86481 221 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 PRR20AP86496 221 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 MIC13Q5XKP0 118 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 SLC51BQ86UW2 128 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 OR9G4Q8NGQ1 327 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 PBDC1Q9BVG4 233 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 SLC39A9Q9NUM3 307 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 PXMP4Q9Y6I8 212 aa12.61□□□□□ -0.39
TSPAN4-208ENST00000409531 TPT1P13693 172 aaKnown RBP12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 IGLL1P15814 213 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 NPPCP23582 126 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 ATP6V0CP27449 155 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 SERF2P84101 59 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 BEAN1Q3B7T3 259 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 KPRPQ5T749 579 aaPredicted RBP12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 UNQ9165/PRO28630Q6UXU0 137 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms