RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TMEM217Q8N7C4 229 aa9.77□□□□□ -0.85
SDF4-203ENST00000403997 GATAD1Q8WUU5 269 aa9.77□□□□□ -0.85
SDF4-203ENST00000403997 GLMPQ8WWB7 406 aa9.77□□□□□ -0.85
SDF4-203ENST00000403997 RARRES2Q99969 163 aa9.77□□□□□ -0.85
SDF4-203ENST00000403997 MAGT1Q9H0U3 335 aa9.77□□□□□ -0.85
SDF4-203ENST00000403997 C9orf170A2RU37 121 aa9.76□□□□□ -0.85
SDF4-203ENST00000403997 UBE2MP61081 183 aaKnown RBP9.76□□□□□ -0.85
SDF4-203ENST00000403997 RPP30P78346 268 aaKnown RBP9.76□□□□□ -0.85
SDF4-203ENST00000403997 OR11H2Q8NH07 326 aa9.76□□□□□ -0.85
SDF4-203ENST00000403997 DCANP1Q8TF63 244 aa9.76□□□□□ -0.85
SDF4-203ENST00000403997 CIB3Q96Q77 187 aaPredicted RBP9.76□□□□□ -0.85
SDF4-203ENST00000403997 PBDC1Q9BVG4 233 aa9.76□□□□□ -0.85
SDF4-203ENST00000403997 FLVCR2Q9UPI3 526 aa9.76□□□□□ -0.85
SDF4-203ENST00000403997 KNCNA6PVL3 124 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 CENPXA8MT69 81 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 WRBO00258 174 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 BUB3O43684 328 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 SYNGR2O43760 224 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 NDUFB6O95139 128 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 FABP1P07148 127 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 ZNF90Q03938 601 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 ACTL10Q5JWF8 245 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 RNF125Q96EQ8 232 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 SDHCQ99643 169 aaPredicted RBP9.75□□□□□ -0.85
SDF4-203ENST00000403997 PFDN2Q9UHV9 154 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 AGRNO00468 2067 aa9.75□□□□□ -0.85
SDF4-203ENST00000403997 IGKV1D-37A0A075B6S9 117 aa9.74□□□□□ -0.85
SDF4-203ENST00000403997 SNRPGP15A8MWD9 76 aa9.74□□□□□ -0.85
SDF4-203ENST00000403997 ATF4P18848 351 aaPredicted RBP9.74□□□□□ -0.85
SDF4-203ENST00000403997 OR2F1Q13607 317 aa9.74□□□□□ -0.85
SDF4-203ENST00000403997 PSMG4Q5JS54 123 aa9.74□□□□□ -0.85
SDF4-203ENST00000403997 SPANXN5Q5MJ07 72 aa9.74□□□□□ -0.85
SDF4-203ENST00000403997 SIGLEC15Q6ZMC9 328 aa9.74□□□□□ -0.85
SDF4-203ENST00000403997 RAB40CQ96S21 281 aa9.74□□□□□ -0.85
SDF4-203ENST00000403997 NUPR2A6NF83 97 aa9.73□□□□□ -0.85
SDF4-203ENST00000403997 ADAP1O75689 374 aa9.73□□□□□ -0.85
SDF4-203ENST00000403997 IFNA21P01568 189 aa9.73□□□□□ -0.85
SDF4-203ENST00000403997 OR4E1P0C645 316 aa9.73□□□□□ -0.85
SDF4-203ENST00000403997 NUP62P37198 522 aaPredicted RBP9.73□□□□□ -0.85
SDF4-203ENST00000403997 LYZP61626 148 aa9.73□□□□□ -0.85
SDF4-203ENST00000403997 SNRPD3P62318 126 aaKnown RBP9.73□□□□□ -0.85
SDF4-203ENST00000403997 OR8G2PQ6IF36 304 aa9.73□□□□□ -0.85
SDF4-203ENST00000403997 CEMP1Q6PRD7 247 aaPredicted RBP9.73□□□□□ -0.85
SDF4-203ENST00000403997 TRPT1Q86TN4 253 aaKnown RBP9.73□□□□□ -0.85
SDF4-203ENST00000403997 COQ8AQ8NI60 647 aa9.73□□□□□ -0.85
SDF4-203ENST00000403997 TRGV9Q99603 122 aa9.73□□□□□ -0.85
SDF4-203ENST00000403997 NRN1Q9NPD7 142 aa9.73□□□□□ -0.85
SDF4-203ENST00000403997 NDUFA13Q9P0J0 144 aa9.73□□□□□ -0.85
SDF4-203ENST00000403997 LYSTQ99698 3801 aa9.72□□□□□ -0.85
SDF4-203ENST00000403997 SACSQ9NZJ4 4579 aa9.72□□□□□ -0.85
SDF4-203ENST00000403997 SPP1P10451 314 aa9.72□□□□□ -0.85
SDF4-203ENST00000403997 IL7P13232 177 aa9.72□□□□□ -0.85
SDF4-203ENST00000403997 ANXA7P20073 488 aaKnown RBP9.72□□□□□ -0.85
SDF4-203ENST00000403997 C4orf46Q504U0 113 aa9.72□□□□□ -0.85
SDF4-203ENST00000403997 MORN3Q6PF18 240 aaPredicted RBP9.72□□□□□ -0.85
SDF4-203ENST00000403997 PPP1R14BQ96C90 147 aa9.72□□□□□ -0.85
SDF4-203ENST00000403997 C7orf50Q9BRJ6 194 aaKnown RBP9.72□□□□□ -0.85
SDF4-203ENST00000403997 KLK5Q9Y337 293 aaPredicted RBP9.72□□□□□ -0.85
SDF4-203ENST00000403997 STRAPQ9Y3F4 350 aaKnown RBP9.72□□□□□ -0.85
SDF4-203ENST00000403997 EPPK1P58107 5090 aaKnown RBP9.72□□□□□ -0.85
SDF4-203ENST00000403997 H3BP45 60 aa9.71□□□□□ -0.86
SDF4-203ENST00000403997 DEFB4AO15263 64 aa9.71□□□□□ -0.86
SDF4-203ENST00000403997 GIG44P09565 113 aaPredicted RBP9.71□□□□□ -0.86
SDF4-203ENST00000403997 BTCP35070 178 aa9.71□□□□□ -0.86
SDF4-203ENST00000403997 POLR2GP62487 172 aaKnown RBP eCLIP9.71□□□□□ -0.86
SDF4-203ENST00000403997 ID3Q02535 119 aa9.71□□□□□ -0.86
SDF4-203ENST00000403997 TMEM41BQ5BJD5 291 aa9.71□□□□□ -0.86
SDF4-203ENST00000403997 C1orf194Q5T5A4 169 aa9.71□□□□□ -0.86
SDF4-203ENST00000403997 THAP8Q8NA92 274 aa9.71□□□□□ -0.86
SDF4-203ENST00000403997 SEPSECSQ9HD40 501 aaKnown RBP9.71□□□□□ -0.86
SDF4-203ENST00000403997 IGKV1OR2-108A0A075B7D4 117 aa9.7□□□□□ -0.86
SDF4-203ENST00000403997 NKX2-1P43699 371 aaPredicted RBP9.7□□□□□ -0.86
SDF4-203ENST00000403997 C11orf45Q8TAV5 145 aa9.7□□□□□ -0.86
SDF4-203ENST00000403997 PHLDA1Q8WV24 401 aaPredicted RBP9.7□□□□□ -0.86
SDF4-203ENST00000403997 LINC00052Q96N35 136 aa9.7□□□□□ -0.86
SDF4-203ENST00000403997 C11orf68Q9H3H3 251 aaKnown RBP9.7□□□□□ -0.86
SDF4-203ENST00000403997 CLEC5AQ9NY25 188 aa9.7□□□□□ -0.86
SDF4-203ENST00000403997 PSENENQ9NZ42 101 aa9.7□□□□□ -0.86
SDF4-203ENST00000403997 FBXL17Q9UF56 701 aa9.7□□□□□ -0.86
SDF4-203ENST00000403997 RYR2Q92736 4967 aa9.7□□□□□ -0.86
SDF4-203ENST00000403997 PRSS46E5RG02 174 aa9.69□□□□□ -0.86
SDF4-203ENST00000403997 LY6G6CO95867 125 aa9.69□□□□□ -0.86
SDF4-203ENST00000403997 CFDP00746 253 aaPredicted RBP9.69□□□□□ -0.86
SDF4-203ENST00000403997 C4BPBP20851 252 aa9.69□□□□□ -0.86
SDF4-203ENST00000403997 ID1P41134 155 aa9.69□□□□□ -0.86
SDF4-203ENST00000403997 NANOS2P60321 138 aaKnown RBP9.69□□□□□ -0.86
SDF4-203ENST00000403997 NUTF2P61970 127 aaKnown RBP9.69□□□□□ -0.86
SDF4-203ENST00000403997 AKR1C1Q04828 323 aa9.69□□□□□ -0.86
SDF4-203ENST00000403997 CNPY1Q3B7I2 92 aa9.69□□□□□ -0.86
SDF4-203ENST00000403997 OR8I2Q8N0Y5 310 aa9.69□□□□□ -0.86
SDF4-203ENST00000403997 OR4D5Q8NGN0 318 aa9.69□□□□□ -0.86
SDF4-203ENST00000403997 MFFQ9GZY8 342 aa9.69□□□□□ -0.86
SDF4-203ENST00000403997 SMCO3A2RU48 225 aa9.68□□□□□ -0.86
SDF4-203ENST00000403997 H3BMM0 161 aa9.68□□□□□ -0.86
SDF4-203ENST00000403997 PLA2G10O15496 165 aa9.68□□□□□ -0.86
SDF4-203ENST00000403997 SSSCA1O60232 199 aa9.68□□□□□ -0.86
SDF4-203ENST00000403997 SCGB1D2O95969 90 aa9.68□□□□□ -0.86
SDF4-203ENST00000403997 IAH1Q2TAA2 248 aaPredicted RBP9.68□□□□□ -0.86
SDF4-203ENST00000403997 ACOT7LQ6ZUV0 252 aa9.68□□□□□ -0.86
SDF4-203ENST00000403997 TMEM144Q7Z5S9 345 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms