RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 UBE2L5PA0A1B0GUS4 154 aa12.11□□□□□ -0.47
HMGA1-204ENST00000401473 C2orf70A6NJV1 201 aa12.11□□□□□ -0.47
HMGA1-204ENST00000401473 A8MWP6 167 aa12.11□□□□□ -0.47
HMGA1-204ENST00000401473 AGPAT2O15120 278 aa12.11□□□□□ -0.47
HMGA1-204ENST00000401473 FBXL17Q9UF56 701 aa12.11□□□□□ -0.47
HMGA1-204ENST00000401473 FBN3Q75N90 2809 aa12.11□□□□□ -0.47
HMGA1-204ENST00000401473 MEGF8Q7Z7M0 2845 aa12.11□□□□□ -0.47
HMGA1-204ENST00000401473 HMSDA8MTL9 139 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 CBLN1P23435 193 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 USF2Q15853 346 aaPredicted RBP12.1□□□□□ -0.47
HMGA1-204ENST00000401473 OXLD1Q5BKU9 147 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 BTNL8Q6UX41 500 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 OR51G1Q8NGK1 321 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 ATP5SQ99766 215 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 MFFQ9GZY8 342 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 DNAH3Q8TD57 4116 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 WI2-2373I1.2A0A1W2PRP0 233 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 SCGB2A1O75556 95 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 APOHP02749 345 aaPredicted RBP12.1□□□□□ -0.47
HMGA1-204ENST00000401473 IL4P05112 153 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 FOLR2P14207 255 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 NUP62P37198 522 aaPredicted RBP12.1□□□□□ -0.47
HMGA1-204ENST00000401473 CYP2G1PQ6ZSU1 146 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 DAZ1Q9NQZ3 744 aaKnown RBP12.1□□□□□ -0.47
HMGA1-204ENST00000401473 SLC45A2Q9UMX9 530 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 SELENOKQ9Y6D0 94 aa12.1□□□□□ -0.47
HMGA1-204ENST00000401473 SEC14L6B5MCN3 397 aa12.09□□□□□ -0.47
HMGA1-204ENST00000401473 K7EMT4 169 aa12.09□□□□□ -0.47
HMGA1-204ENST00000401473 CXCL2P19875 107 aa12.09□□□□□ -0.47
HMGA1-204ENST00000401473 WDR61Q9GZS3 305 aaKnown RBP12.09□□□□□ -0.47
HMGA1-204ENST00000401473 PEMTQ9UBM1 199 aa12.09□□□□□ -0.47
HMGA1-204ENST00000401473 UFC1Q9Y3C8 167 aa12.09□□□□□ -0.47
HMGA1-204ENST00000401473 IGHV3-49A0A0A0MS15 119 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 C1QBP02746 253 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 C8orf88P0DMB2 117 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 FGF7P21781 194 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 CAMLGP49069 296 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 STPG3Q8N7X2 389 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 BPIFCQ8NFQ6 507 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 RNF125Q96EQ8 232 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 GGTLC1Q9BX51 225 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 RFNGQ9Y644 331 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 IGHV3OR16-13A0A075B7E8 117 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 IGHV3-74A0A0B4J1X5 117 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 SAP30O75446 220 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 LINC00869P0C866 280 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 ELLP55199 621 aaPredicted RBP12.08□□□□□ -0.48
HMGA1-204ENST00000401473 NPCDR1Q9BY65 106 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 SIGLEC8Q9NYZ4 499 aa12.08□□□□□ -0.48
HMGA1-204ENST00000401473 G3V4G9 280 aa12.07□□□□□ -0.48
HMGA1-204ENST00000401473 DFFBO76075 338 aa12.07□□□□□ -0.48
HMGA1-204ENST00000401473 SELENOTP62341 195 aa12.07□□□□□ -0.48
HMGA1-204ENST00000401473 PBDC1Q9BVG4 233 aa12.07□□□□□ -0.48
HMGA1-204ENST00000401473 ELOVL1Q9BW60 279 aa12.07□□□□□ -0.48
HMGA1-204ENST00000401473 FABP1P07148 127 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 CRYBB3P26998 211 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 EIF2B2P49770 351 aaKnown RBP12.06□□□□□ -0.48
HMGA1-204ENST00000401473 LYZP61626 148 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 PRR20EP86478 221 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 PRR20CP86479 221 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 PRR20DP86480 221 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 PRR20BP86481 221 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 PRR20AP86496 221 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 LGALSLQ3ZCW2 172 aaPredicted RBP12.06□□□□□ -0.48
HMGA1-204ENST00000401473 MIC13Q5XKP0 118 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 MRPL27Q9P0M9 148 aaKnown RBP12.06□□□□□ -0.48
HMGA1-204ENST00000401473 MLXQ9UH92 298 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 SMPXQ9UHP9 88 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 IGHV3-66A0A0C4DH42 116 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 IGHV7-4-1A0A0J9YVY3 117 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 MPDU1O75352 247 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 ORM2P19652 201 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 NPPCP23582 126 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 RPL29P47914 159 aaKnown RBP12.06□□□□□ -0.48
HMGA1-204ENST00000401473 RAB31Q13636 194 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 ZNF345Q14585 488 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 RPL7L1Q6DKI1 246 aaKnown RBP12.06□□□□□ -0.48
HMGA1-204ENST00000401473 PATE2Q6UY27 113 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 KCNRGQ8N5I3 272 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 GINS3Q9BRX5 216 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 RSG1Q9BU20 258 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 MCRIP2Q9BUT9 160 aaKnown RBP12.06□□□□□ -0.48
HMGA1-204ENST00000401473 CYTL1Q9NRR1 136 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 U3KQE9 123 aa12.06□□□□□ -0.48
HMGA1-204ENST00000401473 CHEK1O14757 476 aa12.05□□□□□ -0.48
HMGA1-204ENST00000401473 OPCMLQ14982 345 aa12.05□□□□□ -0.48
HMGA1-204ENST00000401473 DEFB114Q30KQ6 69 aa12.05□□□□□ -0.48
HMGA1-204ENST00000401473 C9orf66Q5T8R8 295 aa12.05□□□□□ -0.48
HMGA1-204ENST00000401473 SAMD5Q5TGI4 173 aa12.05□□□□□ -0.48
HMGA1-204ENST00000401473 RHPN1-AS1Q9BWJ2 59 aa12.05□□□□□ -0.48
HMGA1-204ENST00000401473 WIPF1O43516 503 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 CFDP00746 253 aaPredicted RBP12.04□□□□□ -0.48
HMGA1-204ENST00000401473 IFNA5P01569 189 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 IGLV1-51P01701 117 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 INSL3P51460 131 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 PLP1P60201 277 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 OR1B1Q8NGR6 318 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 TMEM37Q8WXS4 190 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 ST8SIA2Q92186 375 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 HYLS1Q96M11 299 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms