RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 PSMB11A5LHX3 300 aa7.67□□□□□ -1.18
COL28A1-201ENST00000399429 K7ESF4 209 aa7.67□□□□□ -1.18
COL28A1-201ENST00000399429 PPIFP30405 207 aaKnown RBP7.67□□□□□ -1.18
COL28A1-201ENST00000399429 RHOGP84095 191 aa7.67□□□□□ -1.18
COL28A1-201ENST00000399429 COQ2Q96H96 371 aa7.67□□□□□ -1.18
COL28A1-201ENST00000399429 NPFFR1Q9GZQ6 430 aa7.67□□□□□ -1.18
COL28A1-201ENST00000399429 CALYQ9NYX4 217 aa7.67□□□□□ -1.18
COL28A1-201ENST00000399429 TRAV8-2A0A0B4J237 113 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 NDUFA3O95167 84 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 CELA3AP09093 270 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 WDR82Q6UXN9 313 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 IDI2-AS1Q9NZ38 188 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 ARFGEF3Q5TH69 2177 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 IGHV3-72A0A0B4J1Y9 119 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 C15orf61A6NNL5 157 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 IGLV3-1P01715 115 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 IFI27P40305 119 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-201ENST00000399429 CIARTQ8N365 385 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-201ENST00000399429 NOTCH4Q99466 2003 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 PKDREJQ9NTG1 2253 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 M0R1B8 84 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 S100A4P26447 101 aaKnown RBP7.66□□□□□ -1.18
COL28A1-201ENST00000399429 EMP1P54849 157 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 Q9H3A6 140 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 PRDM6Q9NQX0 595 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 JPT1Q9UK76 154 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 D6R8Y8 96 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 SMIM17P0DL12 118 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 ANXA2RQ3ZCQ2 193 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 ZFAND6Q6FIF0 208 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 ZNF295-AS1Q8N0V1 137 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 SYT8Q8NBV8 401 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 MBNL3Q9NUK0 354 aaKnown RBP7.66□□□□□ -1.18
COL28A1-201ENST00000399429 NCOR1O75376 2440 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 KIAA1549Q9HCM3 1950 aa7.66□□□□□ -1.18
COL28A1-201ENST00000399429 CREBBPQ92793 2442 aa7.65□□□□□ -1.18
COL28A1-201ENST00000399429 MED12LQ86YW9 2145 aa7.65□□□□□ -1.18
COL28A1-201ENST00000399429 LINC00310P59036 64 aa7.65□□□□□ -1.18
COL28A1-201ENST00000399429 ASCL2Q99929 193 aa7.65□□□□□ -1.18
COL28A1-201ENST00000399429 BEX4Q9NWD9 120 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-201ENST00000399429 TNRC6AQ8NDV7 1962 aaKnown RBP7.65□□□□□ -1.18
COL28A1-201ENST00000399429 LEPP41159 167 aa7.65□□□□□ -1.18
COL28A1-201ENST00000399429 KLF14Q8TD94 323 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-201ENST00000399429 C11orf52Q96A22 123 aa7.65□□□□□ -1.18
COL28A1-201ENST00000399429 VGLL1Q99990 258 aa7.65□□□□□ -1.18
COL28A1-201ENST00000399429 DYNLRB1Q9NP97 96 aa7.65□□□□□ -1.18
COL28A1-201ENST00000399429 DYSFO75923 2080 aa7.65□□□□□ -1.18
COL28A1-201ENST00000399429 NOTCH3Q9UM47 2321 aa7.65□□□□□ -1.19
COL28A1-201ENST00000399429 NCR2O95944 276 aa7.65□□□□□ -1.19
COL28A1-201ENST00000399429 FMC1Q96HJ9 113 aa7.65□□□□□ -1.19
COL28A1-201ENST00000399429 CHAC1Q9BUX1 264 aa7.65□□□□□ -1.19
COL28A1-201ENST00000399429 IGHV5-10-1A0A0J9YXX1 117 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 ZNF785A8K8V0 405 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 B5MCH6 92 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 J3KRW8 73 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 FCGR2BP31994 310 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-201ENST00000399429 Q6ZPA2 131 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 OR5AN1Q8NGI8 311 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 TRBV6-6A0A0A6YYG2 114 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 K7EMI3 77 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 PRTN3P24158 256 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 GAGE2BQ13066 116 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 WFDC2Q14508 124 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 GAGE2EQ4V326 116 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 Q6P435 159 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 ZGRF1Q86YA3 2104 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 ZNF714Q96N38 554 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 GAGE2DQ9UEU5 116 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 C2orf70A6NJV1 201 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-201ENST00000399429 M0R3E3 92 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 ZC2HC1BQ5TFG8 222 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 ACP7Q6ZNF0 438 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 SPATA12Q7Z6I5 190 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 PCP2Q8IVA1 136 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 SCRT2Q9NQ03 307 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 IGLV3-32A0A0A0MS00 114 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 IGHV1-45A0A0A0MS14 117 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 C22orf46C9J442 243 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-201ENST00000399429 HOXA3O43365 443 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-201ENST00000399429 SP9P0CG40 484 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 CD69Q07108 199 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 PCOLCEQ15113 449 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 RPRMLQ8N4K4 120 aa7.64□□□□□ -1.19
COL28A1-201ENST00000399429 FREM1Q5H8C1 2179 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 TNCP24821 2201 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 F2RL2O00254 374 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 VDAC2P45880 294 aaPredicted RBP7.63□□□□□ -1.19
COL28A1-201ENST00000399429 ATP5G2Q06055 141 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 PPP1R32Q7Z5V6 425 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 SLC25A45Q8N413 288 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 TRGV5A0A0B4J1U4 118 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 LOXL3P58215 753 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 TMEM249Q2WGJ8 235 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 CRIP3Q6Q6R5 217 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 C6orf15Q6UXA7 325 aaPredicted RBP7.63□□□□□ -1.19
COL28A1-201ENST00000399429 CCL13Q99616 98 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 SCNM1Q9BWG6 230 aa7.63□□□□□ -1.19
COL28A1-201ENST00000399429 NPIPB11E5RHQ5 1161 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms