RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 C11orf71Q6IPW1 123 aa9.45□□□□□ -0.9
COL25A1-202ENST00000399127 TEX43Q6ZNM6 134 aa9.45□□□□□ -0.9
COL25A1-202ENST00000399127 USP24Q9UPU5 2620 aa9.45□□□□□ -0.9
COL25A1-202ENST00000399127 WDR73Q6P4I2 378 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 UNQ5815/PRO19632Q6UWF5 114 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 TMEM37Q8WXS4 190 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 RPEQ96AT9 228 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 TIMD4Q96H15 378 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 UBTD1Q9HAC8 227 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 MRPL36Q9P0J6 103 aaKnown RBP9.44□□□□□ -0.9
COL25A1-202ENST00000399127 IGHV3-21A0A0B4J1V1 117 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 SCO2A0A1W2PP80 73 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 PDE6DO43924 150 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 LIPFP07098 398 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 AREGP15514 252 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 CD33P20138 364 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 CD24P25063 80 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 KLRD1Q13241 179 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 RUSC1-AS1Q66K80 236 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 OR4A5Q8NH83 315 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 VAMP8Q9BV40 100 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 HILPDAQ9Y5L2 63 aa9.44□□□□□ -0.9
COL25A1-202ENST00000399127 CELSR1Q9NYQ6 3014 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 FNDC10F2Z333 226 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 OR10J4P0C629 311 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 LGALS7P47929 136 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 ZNF114Q8NC26 417 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 NPIPB3Q92617 1050 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 ZFYVE26Q68DK2 2539 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 CRYBG3Q68DQ2 2970 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 OR7C2O60412 319 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 RIPPLY3P57055 190 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 ZNF90Q03938 601 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 PSG5Q15238 335 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 PRSS8Q16651 343 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 TMEM249Q2WGJ8 235 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 FBXL15Q9H469 300 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 CLEC5AQ9NY25 188 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 FUT9Q9Y231 359 aa9.43□□□□□ -0.9
COL25A1-202ENST00000399127 MYO18BQ8IUG5 2567 aa9.42□□□□□ -0.9
COL25A1-202ENST00000399127 TRBV20OR9-2A0A075B6H5 130 aa9.42□□□□□ -0.9
COL25A1-202ENST00000399127 IGLC7A0M8Q6 106 aa9.42□□□□□ -0.9
COL25A1-202ENST00000399127 H7BYZ3 331 aa9.42□□□□□ -0.9
COL25A1-202ENST00000399127 TPTE2P1Q5T6R2 138 aa9.42□□□□□ -0.9
COL25A1-202ENST00000399127 MORN5Q5VZ52 161 aa9.42□□□□□ -0.9
COL25A1-202ENST00000399127 SIGLEC9Q9Y336 463 aa9.42□□□□□ -0.9
COL25A1-202ENST00000399127 FCN1O00602 326 aa9.42□□□□□ -0.9
COL25A1-202ENST00000399127 TIMM23O14925 209 aa9.42□□□□□ -0.9
COL25A1-202ENST00000399127 ATP5IP56385 69 aaPredicted RBP9.42□□□□□ -0.9
COL25A1-202ENST00000399127 C8orf46Q8TAG6 207 aa9.42□□□□□ -0.9
COL25A1-202ENST00000399127 SSBP3Q9BWW4 388 aaPredicted RBP9.42□□□□□ -0.9
COL25A1-202ENST00000399127 LAMTOR2Q9Y2Q5 125 aa9.42□□□□□ -0.9
COL25A1-202ENST00000399127 TRAV30A0A087WSZ9 112 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 TRAV5A0A0B4J249 113 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 FSTL3O95633 263 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 RPL27AP46776 148 aaKnown RBP9.41□□□□□ -0.9
COL25A1-202ENST00000399127 SUB1P53999 127 aaKnown RBP eCLIP9.41□□□□□ -0.9
COL25A1-202ENST00000399127 MFAP2P55001 183 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 PLGLAQ15195 96 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 MMD2Q8IY49 270 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 ZNF843Q8N446 348 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 LY6G5BQ8NDX9 201 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 CACNG8Q8WXS5 425 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 ZNF503Q96F45 646 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 UHRF2Q96PU4 802 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 CTDSP1Q9GZU7 261 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 MT-CO2P00403 227 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 MOSP00540 346 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 GALR1P47211 349 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 PPP1R27Q86WC6 154 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 TEX45Q8NA69 505 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 NEU4Q8WWR8 484 aaPredicted RBP9.41□□□□□ -0.9
COL25A1-202ENST00000399127 PYGO2Q9BRQ0 406 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 CHODLQ9H9P2 273 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 CELSR2Q9HCU4 2923 aa9.41□□□□□ -0.9
COL25A1-202ENST00000399127 USP9XQ93008 2570 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-202ENST00000399127 INS-IGF2F8WCM5 200 aa9.4□□□□□ -0.9
COL25A1-202ENST00000399127 AMMECR1Q9Y4X0 333 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-202ENST00000399127 SPG11Q96JI7 2443 aa9.4□□□□□ -0.9
COL25A1-202ENST00000399127 LY6LH3BQJ8 138 aa9.4□□□□□ -0.91
COL25A1-202ENST00000399127 K7ERU9 68 aa9.4□□□□□ -0.91
COL25A1-202ENST00000399127 RBP4P02753 201 aa9.4□□□□□ -0.91
COL25A1-202ENST00000399127 CRYGBP07316 175 aa9.4□□□□□ -0.91
COL25A1-202ENST00000399127 PFN1P07737 140 aaKnown RBP9.4□□□□□ -0.91
COL25A1-202ENST00000399127 COMPP49747 757 aaPredicted RBP9.4□□□□□ -0.91
COL25A1-202ENST00000399127 ACTL10Q5JWF8 245 aa9.4□□□□□ -0.91
COL25A1-202ENST00000399127 TMEM256Q8N2U0 113 aa9.4□□□□□ -0.91
COL25A1-202ENST00000399127 SLC25A33Q9BSK2 321 aa9.4□□□□□ -0.91
COL25A1-202ENST00000399127 TECRQ9NZ01 308 aaKnown RBP9.4□□□□□ -0.91
COL25A1-202ENST00000399127 IGKV1D-37A0A075B6S9 117 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 A0A1B0GUS0 222 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 VENTXO95231 258 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 HTR1DP28221 377 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 CNN1P51911 297 aaKnown RBP9.39□□□□□ -0.91
COL25A1-202ENST00000399127 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
COL25A1-202ENST00000399127 DTX2Q86UW9 622 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 OR5B12Q96R08 314 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 MEGF9Q9H1U4 602 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 NUPR1O60356 82 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 GOSR1O95249 250 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms