RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 SLC35E1Q96K37 410 aa12.35□□□□□ -0.43
APTR-201ENST00000398043 SMIM8Q96KF7 97 aa12.35□□□□□ -0.43
APTR-201ENST00000398043 TRGV9Q99603 122 aa12.35□□□□□ -0.43
APTR-201ENST00000398043 H3BP45 60 aa12.34□□□□□ -0.43
APTR-201ENST00000398043 K7EQG2 157 aa12.34□□□□□ -0.43
APTR-201ENST00000398043 BUB3O43684 328 aa12.34□□□□□ -0.43
APTR-201ENST00000398043 H2AFB2P0C5Z0 115 aa12.34□□□□□ -0.43
APTR-201ENST00000398043 CMC4P56277 68 aaPredicted RBP12.34□□□□□ -0.43
APTR-201ENST00000398043 IAH1Q2TAA2 248 aaPredicted RBP12.34□□□□□ -0.43
APTR-201ENST00000398043 APRG1Q8IVJ8 170 aa12.34□□□□□ -0.43
APTR-201ENST00000398043 OR51G1Q8NGK1 321 aa12.34□□□□□ -0.43
APTR-201ENST00000398043 DCANP1Q8TF63 244 aa12.34□□□□□ -0.43
APTR-201ENST00000398043 RCL1Q9Y2P8 373 aaKnown RBP12.34□□□□□ -0.43
APTR-201ENST00000398043 STRAPQ9Y3F4 350 aaKnown RBP12.34□□□□□ -0.43
APTR-201ENST00000398043 FAM240BA0A1B0GVZ2 78 aa12.33□□□□□ -0.44
APTR-201ENST00000398043 ZFP92A6NM28 416 aa12.33□□□□□ -0.44
APTR-201ENST00000398043 CCSO14618 274 aa12.33□□□□□ -0.44
APTR-201ENST00000398043 PAFAH1B2P68402 229 aa12.33□□□□□ -0.44
APTR-201ENST00000398043 MZT2BQ6NZ67 158 aa12.33□□□□□ -0.44
APTR-201ENST00000398043 STPG3Q8N7X2 389 aa12.33□□□□□ -0.44
APTR-201ENST00000398043 MUC7Q8TAX7 377 aa12.33□□□□□ -0.44
APTR-201ENST00000398043 RNF125Q96EQ8 232 aa12.33□□□□□ -0.44
APTR-201ENST00000398043 OVOL2Q9BRP0 275 aa12.33□□□□□ -0.44
APTR-201ENST00000398043 KIR2DL5BA0A0G2JN68 375 aa12.32□□□□□ -0.44
APTR-201ENST00000398043 KIR2DL5BA0A0G2JPC4 375 aa12.32□□□□□ -0.44
APTR-201ENST00000398043 C3orf84H3BNL1 204 aa12.32□□□□□ -0.44
APTR-201ENST00000398043 SSSCA1O60232 199 aa12.32□□□□□ -0.44
APTR-201ENST00000398043 CCNKO75909 580 aa12.32□□□□□ -0.44
APTR-201ENST00000398043 MBPP02686 304 aaPredicted RBP12.32□□□□□ -0.44
APTR-201ENST00000398043 IL15RAQ13261 267 aa12.32□□□□□ -0.44
APTR-201ENST00000398043 TMEM14EPQ6UXP3 125 aa12.32□□□□□ -0.44
APTR-201ENST00000398043 WFDC3Q8IUB2 231 aa12.32□□□□□ -0.44
APTR-201ENST00000398043 KIR2DL5AQ8N109 375 aa12.32□□□□□ -0.44
APTR-201ENST00000398043 KIR2DL5BQ8NHK3 375 aa12.32□□□□□ -0.44
APTR-201ENST00000398043 PSENENQ9NZ42 101 aa12.32□□□□□ -0.44
APTR-201ENST00000398043 PAIP2BQ9ULR5 123 aaKnown RBP12.32□□□□□ -0.44
APTR-201ENST00000398043 DNASE2O00115 360 aaPredicted RBP12.31□□□□□ -0.44
APTR-201ENST00000398043 IL5P05113 134 aa12.31□□□□□ -0.44
APTR-201ENST00000398043 TAS2R30P59541 319 aa12.31□□□□□ -0.44
APTR-201ENST00000398043 RPL11P62913 178 aaKnown RBP12.31□□□□□ -0.44
APTR-201ENST00000398043 OR8G2PQ6IF36 304 aa12.31□□□□□ -0.44
APTR-201ENST00000398043 ACOT7LQ6ZUV0 252 aa12.31□□□□□ -0.44
APTR-201ENST00000398043 C12orf45Q8N5I9 185 aaPredicted RBP12.31□□□□□ -0.44
APTR-201ENST00000398043 GRAMD2BQ96HH9 432 aa12.31□□□□□ -0.44
APTR-201ENST00000398043 NARS2Q96I59 477 aaKnown RBP12.31□□□□□ -0.44
APTR-201ENST00000398043 RAB40CQ96S21 281 aa12.31□□□□□ -0.44
APTR-201ENST00000398043 C11orf1Q9H5F2 150 aa12.31□□□□□ -0.44
APTR-201ENST00000398043 GSKIPQ9P0R6 139 aa12.31□□□□□ -0.44
APTR-201ENST00000398043 RABAC1Q9UI14 185 aa12.31□□□□□ -0.44
APTR-201ENST00000398043 KMT2CQ8NEZ4 4911 aaKnown RBP12.31□□□□□ -0.44
APTR-201ENST00000398043 TSC22D2O75157 780 aa12.3□□□□□ -0.44
APTR-201ENST00000398043 EIF2B2P49770 351 aaKnown RBP12.3□□□□□ -0.44
APTR-201ENST00000398043 APOC4P55056 127 aa12.3□□□□□ -0.44
APTR-201ENST00000398043 TMEM182Q6ZP80 229 aaPredicted RBP12.3□□□□□ -0.44
APTR-201ENST00000398043 Q6ZWC4 215 aa12.3□□□□□ -0.44
APTR-201ENST00000398043 STXBP6Q8NFX7 210 aa12.3□□□□□ -0.44
APTR-201ENST00000398043 C7orf66A4D0T2 115 aa12.29□□□□□ -0.44
APTR-201ENST00000398043 HELTA6NFD8 242 aa12.29□□□□□ -0.44
APTR-201ENST00000398043 SNRPGP15A8MWD9 76 aa12.29□□□□□ -0.44
APTR-201ENST00000398043 UBE2CO00762 179 aa12.29□□□□□ -0.44
APTR-201ENST00000398043 SCGB1D2O95969 90 aa12.29□□□□□ -0.44
APTR-201ENST00000398043 FABP1P07148 127 aa12.29□□□□□ -0.44
APTR-201ENST00000398043 RPL35AP18077 110 aaKnown RBP12.29□□□□□ -0.44
APTR-201ENST00000398043 DEFB131AP59861 70 aa12.29□□□□□ -0.44
APTR-201ENST00000398043 OR2F1Q13607 317 aa12.29□□□□□ -0.44
APTR-201ENST00000398043 TMEM144Q7Z5S9 345 aa12.29□□□□□ -0.44
APTR-201ENST00000398043 TP53TG1Q9Y2A0 90 aa12.29□□□□□ -0.44
APTR-201ENST00000398043 CSMD3Q7Z407 3707 aa12.28□□□□□ -0.44
APTR-201ENST00000398043 FNDC10F2Z333 226 aa12.28□□□□□ -0.44
APTR-201ENST00000398043 K7EPK0 472 aa12.28□□□□□ -0.44
APTR-201ENST00000398043 METTL15P1P0C7V9 234 aa12.28□□□□□ -0.44
APTR-201ENST00000398043 AP2S1P53680 142 aaPredicted RBP12.28□□□□□ -0.44
APTR-201ENST00000398043 DLK1P80370 383 aa12.28□□□□□ -0.44
APTR-201ENST00000398043 ARL16Q0P5N6 197 aa12.28□□□□□ -0.44
APTR-201ENST00000398043 CASC10Q5T4H9 136 aa12.28□□□□□ -0.44
APTR-201ENST00000398043 NRARPQ7Z6K4 114 aa12.28□□□□□ -0.44
APTR-201ENST00000398043 C2orf50Q96LR7 162 aa12.28□□□□□ -0.44
APTR-201ENST00000398043 PBDC1Q9BVG4 233 aa12.28□□□□□ -0.44
APTR-201ENST00000398043 LYZP61626 148 aa12.27□□□□□ -0.45
APTR-201ENST00000398043 C1orf194Q5T5A4 169 aa12.27□□□□□ -0.45
APTR-201ENST00000398043 LEMD1Q68G75 181 aa12.27□□□□□ -0.45
APTR-201ENST00000398043 SIGLEC15Q6ZMC9 328 aa12.27□□□□□ -0.45
APTR-201ENST00000398043 RNF183Q96D59 192 aa12.27□□□□□ -0.45
APTR-201ENST00000398043 CFDP00746 253 aaPredicted RBP12.26□□□□□ -0.45
APTR-201ENST00000398043 ZNF688P0C7X2 276 aa12.26□□□□□ -0.45
APTR-201ENST00000398043 GATA2P23769 480 aaPredicted RBP12.26□□□□□ -0.45
APTR-201ENST00000398043 NUP62P37198 522 aaPredicted RBP12.26□□□□□ -0.45
APTR-201ENST00000398043 AKR1C1Q04828 323 aa12.26□□□□□ -0.45
APTR-201ENST00000398043 DEFB135Q30KP9 77 aa12.26□□□□□ -0.45
APTR-201ENST00000398043 ENKURQ8TC29 256 aa12.26□□□□□ -0.45
APTR-201ENST00000398043 CSTL1Q9H114 145 aa12.26□□□□□ -0.45
APTR-201ENST00000398043 SEPSECSQ9HD40 501 aaKnown RBP12.26□□□□□ -0.45
APTR-201ENST00000398043 NRN1Q9NPD7 142 aa12.26□□□□□ -0.45
APTR-201ENST00000398043 SLC45A2Q9UMX9 530 aa12.26□□□□□ -0.45
APTR-201ENST00000398043 TENM2Q9NT68 2774 aa12.26□□□□□ -0.45
APTR-201ENST00000398043 C5orf51A6NDU8 294 aa12.25□□□□□ -0.45
APTR-201ENST00000398043 FAM25EA8MYX2 175 aa12.25□□□□□ -0.45
APTR-201ENST00000398043 SPRY2O43597 315 aa12.25□□□□□ -0.45
APTR-201ENST00000398043 LYL1P12980 280 aa12.25□□□□□ -0.45
APTR-201ENST00000398043 TRPT1Q86TN4 253 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms