RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CDX4O14627 284 aaPredicted RBP5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 SCRG1O75711 98 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 EXOC3-AS1Q8N2X6 119 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 TPRX1Q8N7U7 411 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 LYZL4Q96KX0 146 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 PLEKHF2Q9H8W4 249 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 WASHC3Q9Y3C0 194 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 IGKV1D-8A0A087WSZ0 117 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 ANGPTL7O43827 346 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 IGLV3-1P01715 115 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 LMO1P25800 156 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 VDAC2P45880 294 aaPredicted RBP5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 PRR20EP86478 221 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 PRR20CP86479 221 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 PRR20DP86480 221 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 PRR20BP86481 221 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 PRR20AP86496 221 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 GAGE2BQ13066 116 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 GAGE2EQ4V326 116 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 VSTM2AQ8TAG5 236 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 TECRQ9NZ01 308 aaKnown RBP5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 GAGE2DQ9UEU5 116 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 MED12Q93074 2177 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 GGTLC3B5MD39 225 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 F8W1H4 67 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 ACSF3Q4G176 576 aaPredicted RBP5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 IBA57Q5T440 356 aaKnown RBP5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 VKORC1L1Q8N0U8 176 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 RBMXL1Q96E39 390 aaKnown RBP5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 ABHD14BQ96IU4 210 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 SPCS1Q9Y6A9 102 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 MYO18BQ8IUG5 2567 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 TRAV5A0A0B4J249 113 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 PDCD6O75340 191 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 PITX3O75364 302 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 ELANEP08246 267 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 LYRM7Q5U5X0 104 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 OR11H6Q8NGC7 330 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 C18orf12Q96KH6 178 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 FOXC2Q99958 501 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 Q9UF83 564 aa5.39□□□□□ -1.55
TM9SF4-202ENST00000398022 H3BRM9 83 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 NDUFC2O95298 119 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 GLI4P10075 376 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 PCBD1P61457 104 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 PMAIP1Q13794 54 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 ANXA2RQ3ZCQ2 193 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 FAM27BQ5VT28 67 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 Q5XG85 94 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 FBXL14Q8N1E6 418 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 HES7Q9BYE0 225 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 PLA2G2EQ9NZK7 142 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 PROCRQ9UNN8 238 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 C3orf85A0A1B0GTC6 90 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 TMEM250H0YL14 139 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 K7N7A8 449 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 CXCL13O43927 109 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 HOXD3P31249 432 aaPredicted RBP5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 Q71RC1 249 aaPredicted RBP5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 OR10AG1Q8NH19 301 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 FAM208BQ5VWN6 2430 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 SHANK1Q9Y566 2161 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 LGALS1P09382 135 aaKnown RBP5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 KLK2P20151 261 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 PPP1CCP36873 323 aaKnown RBP5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 PTGDSP41222 190 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 KIR2DS2P43631 304 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 FOXL2NBQ6ZUU3 175 aa5.38□□□□□ -1.55
TM9SF4-202ENST00000398022 AHCTF1Q8WYP5 2266 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 NOTCH2Q04721 2471 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 UTP20O75691 2785 aaKnown RBP5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 FER1L5A0AVI2 2057 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 FAM24AA6NFZ4 105 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 K7ENP7 123 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 PPYP01298 95 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 DSCR4P56555 118 aaPredicted RBP5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 Q0VG73 95 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 TRIP6Q15654 476 aaKnown RBP5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 MPV17L2Q567V2 206 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 TRPT1Q86TN4 253 aaKnown RBP5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 TEX45Q8NA69 505 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 CMTM2Q8TAZ6 248 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 NEUROG1Q92886 237 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 RARRES2Q99969 163 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 FZR1Q9UM11 496 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 KLF12Q9Y4X4 402 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 PKD1L2Q7Z442 2459 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 ABCA7Q8IZY2 2146 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 CEP295Q9C0D2 2601 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 MUC21A0A0G2JKD1 596 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 MUC21A0A140T8X8 626 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 DIRC3C9JPN6 131 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 ISLRO14498 428 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 SSSCA1O60232 199 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 HSPB1P04792 205 aaKnown RBP5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 GALR1P47211 349 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 HLA-DRB3P79483 266 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 MUC21Q5SSG8 566 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 ZIC4Q8N9L1 334 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 OR5C1Q8NGR4 320 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms