RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ROBO1Q9Y6N7 1651 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 IGHV3-43A0A0B4J1X8 118 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 H7BYZ3 331 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 CDC42EP2O14613 210 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 TAX1BP3O14907 124 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 OR2T1O43869 369 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 MT-ND4LP03901 98 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 LINC00694P0DN24 101 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 CGB3P0DN86 165 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 CGB7P0DN87 165 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 CRYGSP22914 178 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 HIST1H2BOP23527 126 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 CRHBPP24387 322 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 HIST1H2BBP33778 126 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 SRP14P37108 136 aaKnown RBP2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 HIST1H2BDP58876 126 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 TAS2R45P59539 299 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 HIST1H2BCP62807 126 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 MEF2BQ02080 365 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 HIST2H2BEQ16778 126 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 PABPC1L2AQ5JQF8 200 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 SSX8Q7RTT4 187 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 RNF182Q8N6D2 247 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 RBPMSQ93062 196 aaKnown RBP2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 HIST1H2BHQ93079 126 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 CARD19Q96LW7 228 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 HIST1H2BNQ99877 126 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 HIST1H2BMQ99879 126 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 CBLN4Q9NTU7 201 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 ZNF586Q9NXT0 402 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 ZNF492Q9P255 531 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 YLPM1P49750 1951 aaKnown RBP2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 ABCC8Q09428 1581 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 CFTRP13569 1480 aa2.77□□□□□ -1.97
HMGB1P10-201ENST00000395823 SPATA31E1Q6ZUB1 1445 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 NALCNQ8IZF0 1738 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 DNMT1P26358 1616 aaKnown RBP2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 MROH2BQ7Z745 1585 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 IGHV1-58A0A0C4DH39 117 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 ZNF670-ZNF695F2Z2N8 137 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 ZNF728P0DKX0 622 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 PSMB8P28062 276 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 S100A2P29034 98 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 DAPP51397 102 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 RBM11P57052 281 aaKnown RBP2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 TPPP2P59282 170 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 YPEL3P61236 119 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 EIF5AP63241 154 aaKnown RBP2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 BTG2P78543 158 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 CCL20P78556 96 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 RHOGP84095 191 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 MYL5Q02045 173 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 PDGFRLQ15198 375 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 LAIR2Q6ISS4 152 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 TMEM14EPQ6UXP3 125 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 LCA10Q71F78 164 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 LINC00305Q7Z4B0 112 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 ADM2Q7Z4H4 148 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 C4orf33Q8N1A6 199 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 C9orf62Q8N4C0 152 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 FER1L6-AS1Q8NA97 138 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 OR10AC1Q8NH08 325 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 COPS9Q8WXC6 57 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 H1FXQ92522 213 aaKnown RBP2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 ERMAPQ96PL5 475 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 YPEL2Q96QA6 119 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 GINS4Q9BRT9 223 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 SCRT1Q9BWW7 348 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 TSSK6Q9BXA6 273 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 OTORQ9NRC9 128 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 PRO0461Q9UI25 63 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 IER3IP1Q9Y5U9 82 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 ERICH3Q5RHP9 1530 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 CAMSAP2Q08AD1 1489 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 CCDC18Q5T9S5 1454 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 RALGAPBQ86X10 1494 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 NEO1Q92859 1461 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 SUPT6HQ7KZ85 1726 aaKnown RBP2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 TRAPPC8Q9Y2L5 1435 aa2.76□□□□□ -1.97
HMGB1P10-201ENST00000395823 COL27A1Q8IZC6 1860 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 ANKRD36BQ8N2N9 1353 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 VIRMAQ69YN4 1812 aaKnown RBP2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 KIAA1671Q9BY89 1806 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 IGKV1OR2-108A0A075B7D4 117 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 IGHV3OR15-7A0A075B7D8 119 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 LOC107984640A0A0U1RRK4 108 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 OR2T8A6NH00 312 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 A8MWV9 139 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 C9JCJ5 164 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 H3BMG7 143 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 PLA2G10O15496 165 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 NDUFB3O43676 98 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 IGLV7-43P04211 117 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 FABP2P12104 132 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 RPL22P35268 128 aaKnown RBP2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 LSM3P62310 102 aaKnown RBP2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 HSD52Q0P140 79 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 MEIG1Q5JSS6 88 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms