RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 IGHV4-38-2P0DP08 117 aa9.94□□□□□ -0.82
CIITA-202ENST00000381835 OPRK1P41145 380 aa9.94□□□□□ -0.82
CIITA-202ENST00000381835 RELBQ01201 579 aa9.94□□□□□ -0.82
CIITA-202ENST00000381835 POU2AF1Q16633 256 aa9.94□□□□□ -0.82
CIITA-202ENST00000381835 CMTM2Q8TAZ6 248 aa9.94□□□□□ -0.82
CIITA-202ENST00000381835 TXNDC17Q9BRA2 123 aa9.94□□□□□ -0.82
CIITA-202ENST00000381835 HEYLQ9NQ87 328 aaPredicted RBP9.94□□□□□ -0.82
CIITA-202ENST00000381835 CHTOPQ9Y3Y2 248 aaKnown RBP9.94□□□□□ -0.82
CIITA-202ENST00000381835 TRBV20OR9-2A0A075B6H5 130 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 IGHV1-69DA0A0B4J2H0 117 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 SCO2A0A1W2PP80 73 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 GRIFINA4D1Z8 144 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 CXorf1O96002 111 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 IGHV1-69P01742 117 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 CCDC144NLQ6NUI1 221 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 TREML4Q6UXN2 200 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 CIARTQ8N365 385 aaPredicted RBP9.93□□□□□ -0.82
CIITA-202ENST00000381835 OR10G8Q8NGN5 311 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 CFHR4Q92496 578 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 FOXC2Q99958 501 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 KIR2DL5BA0A0G2JN68 375 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 KIR2DL5BA0A0G2JPC4 375 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 FAM90A9PA6NNJ1 464 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 SLC25A17O43808 307 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 STAG3L2P0CL84 134 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 STAG3L3P0CL85 134 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 CNTFRP26992 372 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 YPEL3P61236 119 aaPredicted RBP9.93□□□□□ -0.82
CIITA-202ENST00000381835 HES1Q14469 280 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 KIR2DL5AQ8N109 375 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 OCC1Q8TAD7 63 aa9.93□□□□□ -0.82
CIITA-202ENST00000381835 OOSP1A8MZH6 123 aa9.92□□□□□ -0.82
CIITA-202ENST00000381835 RRHO14718 337 aa9.92□□□□□ -0.82
CIITA-202ENST00000381835 SMAD7O15105 426 aaKnown RBP9.92□□□□□ -0.82
CIITA-202ENST00000381835 IGLV2-23P01705 113 aa9.92□□□□□ -0.82
CIITA-202ENST00000381835 ZNF90Q03938 601 aa9.92□□□□□ -0.82
CIITA-202ENST00000381835 MIC13Q5XKP0 118 aa9.92□□□□□ -0.82
CIITA-202ENST00000381835 AJUBAQ96IF1 538 aa9.92□□□□□ -0.82
CIITA-202ENST00000381835 MGST2Q99735 147 aa9.92□□□□□ -0.82
CIITA-202ENST00000381835 BET1LQ9NYM9 111 aa9.92□□□□□ -0.82
CIITA-202ENST00000381835 ACANP16112 2415 aa9.92□□□□□ -0.82
CIITA-202ENST00000381835 C15orf61A6NNL5 157 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 MYOD1P15172 320 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 G0S2P27469 103 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 LGALS7P47929 136 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 GGTLC1Q9BX51 225 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 UPK2O00526 184 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 TPPP2P59282 170 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 VMA21Q3ZAQ7 101 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 FBLN7Q53RD9 439 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 CYB5R2Q6BCY4 276 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 ZNF705AQ6ZN79 300 aaPredicted RBP9.91□□□□□ -0.82
CIITA-202ENST00000381835 VSTM2AQ8TAG5 236 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 TPSG1Q9NRR2 321 aa9.91□□□□□ -0.82
CIITA-202ENST00000381835 IL6RP08887 468 aaPredicted RBP9.9□□□□□ -0.82
CIITA-202ENST00000381835 CBLN1P23435 193 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 RPL29P47914 159 aaKnown RBP9.9□□□□□ -0.82
CIITA-202ENST00000381835 SELENOTP62341 195 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 PAFAH1B2P68402 229 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 KLF17Q5JT82 389 aaPredicted RBP9.9□□□□□ -0.82
CIITA-202ENST00000381835 TOMM20LQ6UXN7 152 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 SSMEM1Q8WWF3 244 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 HINT2Q9BX68 163 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 TMEM14BQ9NUH8 114 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 IL36BQ9NZH7 164 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 PRNDQ9UKY0 176 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 YTHDF2Q9Y5A9 579 aaKnown RBP9.9□□□□□ -0.82
CIITA-202ENST00000381835 OR51B2Q9Y5P1 312 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 MOSP00540 346 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 CRISP2P16562 243 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 CD33P20138 364 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 VDAC2P45880 294 aaPredicted RBP9.9□□□□□ -0.82
CIITA-202ENST00000381835 MMDQ15546 238 aa9.9□□□□□ -0.82
CIITA-202ENST00000381835 EAF1Q96JC9 268 aaPredicted RBP9.9□□□□□ -0.82
CIITA-202ENST00000381835 MRPL18Q9H0U6 180 aaKnown RBP9.9□□□□□ -0.82
CIITA-202ENST00000381835 FOXA2Q9Y261 457 aaPredicted RBP9.9□□□□□ -0.82
CIITA-202ENST00000381835 SOX21Q9Y651 276 aaPredicted RBP9.9□□□□□ -0.82
CIITA-202ENST00000381835 FLNBO75369 2602 aaKnown RBP9.9□□□□□ -0.83
CIITA-202ENST00000381835 J3QLI3 93 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 SLC17A3O00476 420 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 RPL8P62917 257 aaKnown RBP9.89□□□□□ -0.83
CIITA-202ENST00000381835 PSG5Q15238 335 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 OR52E5Q8NH55 327 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 TMEM167AQ8TBQ9 72 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 ZNF430Q9H8G1 570 aaPredicted RBP9.89□□□□□ -0.83
CIITA-202ENST00000381835 NPVFQ9HCQ7 196 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 TCF19Q9Y242 345 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 PRSS46E5RG02 174 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 GCHFRP30047 84 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 HSPE1P61604 102 aaKnown RBP9.89□□□□□ -0.83
CIITA-202ENST00000381835 PLGLAQ15195 96 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 FAM120AOSQ5T036 256 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 Q6ZWC4 215 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 COMMD5Q9GZQ3 224 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 FBXL15Q9H469 300 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 TP53TG3Q9ULZ0 132 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 NAV3Q8IVL0 2385 aa9.89□□□□□ -0.83
CIITA-202ENST00000381835 TRAV9-1A0A075B6T8 112 aa9.88□□□□□ -0.83
CIITA-202ENST00000381835 K7EN84 100 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms