RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 IGLC7A0M8Q6 106 aa15.48■□□□□ 0.07
SSU72-204ENST00000378726 GRIFINA4D1Z8 144 aa15.48■□□□□ 0.07
SSU72-204ENST00000378726 YPEL3P61236 119 aaPredicted RBP15.48■□□□□ 0.07
SSU72-204ENST00000378726 C1orf194Q5T5A4 169 aa15.48■□□□□ 0.07
SSU72-204ENST00000378726 TXNDC17Q9BRA2 123 aa15.48■□□□□ 0.07
SSU72-204ENST00000378726 K7EN84 100 aa15.47■□□□□ 0.07
SSU72-204ENST00000378726 APELAP0DMC3 54 aa15.47■□□□□ 0.07
SSU72-204ENST00000378726 GCHFRP30047 84 aa15.47■□□□□ 0.07
SSU72-204ENST00000378726 CACNG8Q8WXS5 425 aa15.47■□□□□ 0.07
SSU72-204ENST00000378726 SEPSECSQ9HD40 501 aaKnown RBP15.47■□□□□ 0.07
SSU72-204ENST00000378726 NAGKQ9UJ70 344 aa15.47■□□□□ 0.07
SSU72-204ENST00000378726 NBR2O15453 112 aa15.47■□□□□ 0.07
SSU72-204ENST00000378726 MS4A10Q96PG2 267 aa15.47■□□□□ 0.07
SSU72-204ENST00000378726 TP53TG3Q9ULZ0 132 aa15.47■□□□□ 0.07
SSU72-204ENST00000378726 TBL2Q9Y4P3 447 aaKnown RBP15.47■□□□□ 0.07
SSU72-204ENST00000378726 SLC17A3O00476 420 aa15.46■□□□□ 0.07
SSU72-204ENST00000378726 CBLN1P23435 193 aa15.46■□□□□ 0.07
SSU72-204ENST00000378726 NPBQ8NG41 125 aa15.46■□□□□ 0.07
SSU72-204ENST00000378726 OR2T6Q8NHC8 308 aa15.46■□□□□ 0.07
SSU72-204ENST00000378726 AREGP15514 252 aa15.45■□□□□ 0.06
SSU72-204ENST00000378726 RPL29P47914 159 aaKnown RBP15.45■□□□□ 0.06
SSU72-204ENST00000378726 SSBP2P81877 361 aaPredicted RBP15.45■□□□□ 0.06
SSU72-204ENST00000378726 IGKV1OR2-108A0A075B7D4 117 aa15.45■□□□□ 0.06
SSU72-204ENST00000378726 CNIH1O95406 144 aa15.45■□□□□ 0.06
SSU72-204ENST00000378726 CD33P20138 364 aa15.45■□□□□ 0.06
SSU72-204ENST00000378726 ZNF90Q03938 601 aa15.45■□□□□ 0.06
SSU72-204ENST00000378726 PAX8Q06710 450 aa15.45■□□□□ 0.06
SSU72-204ENST00000378726 FBLN7Q53RD9 439 aa15.45■□□□□ 0.06
SSU72-204ENST00000378726 STPG3Q8N7X2 389 aa15.45■□□□□ 0.06
SSU72-204ENST00000378726 CMTM2Q8TAZ6 248 aa15.45■□□□□ 0.06
SSU72-204ENST00000378726 NDUFA3O95167 84 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 SRSF12Q8WXF0 261 aaKnown RBP15.44■□□□□ 0.06
SSU72-204ENST00000378726 SLC35E1Q96K37 410 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 FNDC4Q9H6D8 234 aaPredicted RBP15.44■□□□□ 0.06
SSU72-204ENST00000378726 IL36BQ9NZH7 164 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 KIR2DL5BA0A0G2JN68 375 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 KIR2DL5BA0A0G2JPC4 375 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 TEX22C9J3V5 150 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 M0QZK8 103 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 ZNF25P17030 456 aaPredicted RBP15.44■□□□□ 0.06
SSU72-204ENST00000378726 OR10J1P30954 320 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 LINC00310P59036 64 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 KIR2DL5AQ8N109 375 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 SLC45A2Q9UMX9 530 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 NAV3Q8IVL0 2385 aa15.44■□□□□ 0.06
SSU72-204ENST00000378726 FRMD6-AS1P0C7T7 363 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 COL8A1P27658 744 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 SELENOTP62341 195 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 AJUBAQ96IF1 538 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 CENPVL3A0A0U1RRI6 287 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 ZNF705FA8MVS1 300 aaPredicted RBP15.43■□□□□ 0.06
SSU72-204ENST00000378726 IGHV3-48P01763 117 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 LINC00869P0C866 280 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 ZNF705DP0CH99 300 aaPredicted RBP15.43■□□□□ 0.06
SSU72-204ENST00000378726 ZNF705BP0CI00 300 aaPredicted RBP15.43■□□□□ 0.06
SSU72-204ENST00000378726 SAA4P35542 130 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 RHOBP62745 196 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 PRR20EP86478 221 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 PRR20CP86479 221 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 PRR20DP86480 221 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 PRR20BP86481 221 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 PRR20AP86496 221 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 EBI3Q14213 229 aa15.43■□□□□ 0.06
SSU72-204ENST00000378726 MRPL18Q9H0U6 180 aaKnown RBP15.43■□□□□ 0.06
SSU72-204ENST00000378726 NCBP2LA6PVI3 153 aaKnown RBP15.42■□□□□ 0.06
SSU72-204ENST00000378726 DSCR9P59020 149 aa15.42■□□□□ 0.06
SSU72-204ENST00000378726 C5orf64Q2M2E5 130 aa15.42■□□□□ 0.06
SSU72-204ENST00000378726 C19orf35Q6ZS72 473 aa15.42■□□□□ 0.06
SSU72-204ENST00000378726 Q6ZWC4 215 aa15.42■□□□□ 0.06
SSU72-204ENST00000378726 MRPL52Q86TS9 123 aaKnown RBP15.42■□□□□ 0.06
SSU72-204ENST00000378726 MFAP2P55001 183 aa15.41■□□□□ 0.06
SSU72-204ENST00000378726 CYB5R2Q6BCY4 276 aa15.41■□□□□ 0.06
SSU72-204ENST00000378726 PVRIGQ6DKI7 326 aa15.41■□□□□ 0.06
SSU72-204ENST00000378726 NPFFO15130 113 aa15.41■□□□□ 0.06
SSU72-204ENST00000378726 OR5I1Q13606 314 aa15.41■□□□□ 0.06
SSU72-204ENST00000378726 MIR17HGQ75NE6 70 aa15.41■□□□□ 0.06
SSU72-204ENST00000378726 PIP4P2Q8N4L2 257 aa15.41■□□□□ 0.06
SSU72-204ENST00000378726 Q8N6K4 173 aa15.41■□□□□ 0.06
SSU72-204ENST00000378726 OR1L6Q8NGR2 347 aa15.41■□□□□ 0.06
SSU72-204ENST00000378726 NPIPB3Q92617 1050 aa15.41■□□□□ 0.06
SSU72-204ENST00000378726 C11orf52Q96A22 123 aa15.41■□□□□ 0.06
SSU72-204ENST00000378726 MAP1AP78559 2803 aaPredicted RBP15.4■□□□□ 0.06
SSU72-204ENST00000378726 FAM106CPP0CH98 169 aa15.4■□□□□ 0.06
SSU72-204ENST00000378726 GATA2P23769 480 aaPredicted RBP15.4■□□□□ 0.06
SSU72-204ENST00000378726 FXYD3Q14802 87 aa15.4■□□□□ 0.06
SSU72-204ENST00000378726 F11RQ9Y624 299 aaKnown RBP15.4■□□□□ 0.06
SSU72-204ENST00000378726 F2Z2F3 143 aa15.4■□□□□ 0.06
SSU72-204ENST00000378726 SERF1AO75920 110 aa15.4■□□□□ 0.06
SSU72-204ENST00000378726 CRISP2P16562 243 aa15.4■□□□□ 0.06
SSU72-204ENST00000378726 TMEM11P17152 192 aa15.4■□□□□ 0.06
SSU72-204ENST00000378726 FAM120AOSQ5T036 256 aa15.4■□□□□ 0.06
SSU72-204ENST00000378726 C9JCJ5 164 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 BRS3P32247 399 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 IER3P46695 156 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 TPPP2P59282 170 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 TDRG1Q3Y452 100 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 ETFRF1Q6IPR1 90 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 UHRF2Q96PU4 802 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 SRSF8Q9BRL6 282 aaKnown RBP15.39■□□□□ 0.05
SSU72-204ENST00000378726 SLC25A33Q9BSK2 321 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms