RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CCDC144NLQ6NUI1 221 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 MDS2Q8NDY4 140 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 ARPC1AQ92747 370 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 C2orf88Q9BSF0 95 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 GP6Q9HCN6 339 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 LSM4Q9Y4Z0 139 aaKnown RBP5.36□□□□□ -1.55
SMC1A-202ENST00000375340 M0R3E3 92 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 IGKV1-16P04430 117 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 IGFL4Q6B9Z1 124 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 TSKUQ8WUA8 353 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 A0A1W2PS18 150 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 KLRD1Q13241 179 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 PEF1Q9UBV8 284 aaKnown RBP5.36□□□□□ -1.55
SMC1A-202ENST00000375340 FBXL7Q9UJT9 491 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 PHLDA3Q9Y5J5 127 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 CD59P13987 128 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 CD69Q07108 199 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 Q6ZR03 302 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 H0YJW9 148 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 GFRA3O60609 400 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 NCR2O95944 276 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 CLEC19AQ6UXS0 136 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 GPR82Q96P67 336 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 ETV2O00321 342 aaPredicted RBP5.36□□□□□ -1.55
SMC1A-202ENST00000375340 PET117Q6UWS5 81 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 HIST1H1AQ02539 215 aaPredicted RBP5.36□□□□□ -1.55
SMC1A-202ENST00000375340 DTX1Q86Y01 620 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 FAM57AQ8TBR7 257 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 GLMPQ8WWB7 406 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 C1RLQ9NZP8 487 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 SH2D7A6NKC9 451 aaPredicted RBP5.36□□□□□ -1.55
SMC1A-202ENST00000375340 C17orf100A8MU93 164 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 C3orf79P0CE67 100 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 IL15RAQ13261 267 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 PRDM13Q9H4Q3 707 aa5.36□□□□□ -1.55
SMC1A-202ENST00000375340 A0A087X0K7 114 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 K7ERU9 68 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 RPL13AP40429 203 aaKnown RBP5.35□□□□□ -1.55
SMC1A-202ENST00000375340 RPS20P60866 119 aaKnown RBP5.35□□□□□ -1.55
SMC1A-202ENST00000375340 RPL15P61313 204 aaKnown RBP5.35□□□□□ -1.55
SMC1A-202ENST00000375340 MAJINQ3KP22 176 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 LYPD6BQ8NI32 183 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 GPX1P07203 203 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 CNTFRP26992 372 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 SNHG12Q9BXW3 62 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 K7EN84 100 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 WNT2P09544 360 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 WFDC12Q8WWY7 111 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 CACNG8Q8WXS5 425 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 M0R381 172 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 LINC00614P0C842 121 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 DLX1P56177 255 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 CHD3Q12873 2000 aaKnown RBP5.35□□□□□ -1.55
SMC1A-202ENST00000375340 TRAV30A0A087WSZ9 112 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 C9JCJ5 164 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 LYPD2Q6UXB3 125 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 TTC28Q96AY4 2481 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 SMKR1H3BMG3 65 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 ID1P41134 155 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 CACNG7P62955 275 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 FAM71F2Q6NXP2 309 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 FER1L6-AS1Q8NA97 138 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 C8orf49Q96NF6 230 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 ABCA1O95477 2261 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 TMEM30BQ3MIR4 351 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 AMMECR1LQ6DCA0 310 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 TRAV8-1A0A0A6YYK1 113 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 A0A1W2PRE2 83 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 PF4V1P10720 104 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 SPRNQ5BIV9 151 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 TMEM133Q9H2Q1 129 aa5.35□□□□□ -1.55
SMC1A-202ENST00000375340 APOBEC3AP31941 199 aaPredicted RBP5.34□□□□□ -1.55
SMC1A-202ENST00000375340 CHODLQ9H9P2 273 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 ZNF883P0CG24 379 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 CA7P43166 264 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 ATG2AQ2TAZ0 1938 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 SRRM5B3KS81 715 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 EEF1AKMT3Q96AZ1 226 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 ABHD17AQ96GS6 310 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 BEX4Q9NWD9 120 aaPredicted RBP5.34□□□□□ -1.55
SMC1A-202ENST00000375340 B9A039 149 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 D6R8Y8 96 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 PFN1P07737 140 aaKnown RBP5.34□□□□□ -1.55
SMC1A-202ENST00000375340 SFTA2Q6UW10 78 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 NEUROG1Q92886 237 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 SPCS1Q9Y6A9 102 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 AREGP15514 252 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 C8orf46Q8TAG6 207 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 SLC25A15Q9Y619 301 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 CREBBPQ92793 2442 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 IGHV2-26A0A0B4J1V2 119 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 DLEU1O43261 78 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 RNF125Q96EQ8 232 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 RCHY1Q96PM5 261 aa5.34□□□□□ -1.55
SMC1A-202ENST00000375340 COL25A1Q9BXS0 654 aaPredicted RBP5.34□□□□□ -1.55
SMC1A-202ENST00000375340 NPSP0C0P6 89 aa5.34□□□□□ -1.56
SMC1A-202ENST00000375340 PPP1R27Q86WC6 154 aa5.34□□□□□ -1.56
SMC1A-202ENST00000375340 OR5AN1Q8NGI8 311 aa5.34□□□□□ -1.56
SMC1A-202ENST00000375340 MRPL16Q9NX20 251 aaKnown RBP5.34□□□□□ -1.56
SMC1A-202ENST00000375340 TIMM23O14925 209 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms