RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 MUC21A0A0G2JKD1 596 aa11.77□□□□□ -0.52
LMX1B-202ENST00000373474 MUC21A0A140T8X8 626 aa11.77□□□□□ -0.52
LMX1B-202ENST00000373474 MUC21Q5SSG8 566 aa11.77□□□□□ -0.52
LMX1B-202ENST00000373474 PVRIGQ6DKI7 326 aa11.77□□□□□ -0.52
LMX1B-202ENST00000373474 CCL19Q99731 98 aa11.77□□□□□ -0.52
LMX1B-202ENST00000373474 MALP21145 153 aa11.77□□□□□ -0.52
LMX1B-202ENST00000373474 RNASE4P34096 147 aaKnown RBP11.77□□□□□ -0.52
LMX1B-202ENST00000373474 C17orf82Q86X59 251 aaPredicted RBP11.77□□□□□ -0.52
LMX1B-202ENST00000373474 PSG1P11464 419 aa11.77□□□□□ -0.53
LMX1B-202ENST00000373474 LAGE3Q14657 143 aa11.77□□□□□ -0.53
LMX1B-202ENST00000373474 KLF17Q5JT82 389 aaPredicted RBP11.77□□□□□ -0.53
LMX1B-202ENST00000373474 TET1Q8NFU7 2136 aa11.77□□□□□ -0.53
LMX1B-202ENST00000373474 UNC13CQ8NB66 2214 aa11.77□□□□□ -0.53
LMX1B-202ENST00000373474 NTN3O00634 580 aaPredicted RBP11.77□□□□□ -0.53
LMX1B-202ENST00000373474 CCL3L1P16619 93 aa11.77□□□□□ -0.53
LMX1B-202ENST00000373474 CNTRLQ7Z7A1 2325 aa11.77□□□□□ -0.53
LMX1B-202ENST00000373474 ARID1AO14497 2285 aa11.77□□□□□ -0.53
LMX1B-202ENST00000373474 GFI1BQ5VTD9 330 aa11.77□□□□□ -0.53
LMX1B-202ENST00000373474 VWC2LB2RUY7 222 aa11.76□□□□□ -0.53
LMX1B-202ENST00000373474 IGHV3OR16-10A0A075B7F0 116 aa11.76□□□□□ -0.53
LMX1B-202ENST00000373474 NDUFS6O75380 124 aaKnown RBP11.76□□□□□ -0.53
LMX1B-202ENST00000373474 CD28P10747 220 aa11.76□□□□□ -0.53
LMX1B-202ENST00000373474 DNAJC30Q96LL9 226 aa11.76□□□□□ -0.53
LMX1B-202ENST00000373474 KLHDC3Q9BQ90 382 aa11.76□□□□□ -0.53
LMX1B-202ENST00000373474 KLF12Q9Y4X4 402 aa11.76□□□□□ -0.53
LMX1B-202ENST00000373474 TIMP3P35625 211 aa11.76□□□□□ -0.53
LMX1B-202ENST00000373474 NMSQ5H8A3 153 aa11.76□□□□□ -0.53
LMX1B-202ENST00000373474 ARTNQ5T4W7 220 aa11.76□□□□□ -0.53
LMX1B-202ENST00000373474 MRPL27Q9P0M9 148 aaKnown RBP11.76□□□□□ -0.53
LMX1B-202ENST00000373474 KIR3DS1Q14943 382 aa11.76□□□□□ -0.53
LMX1B-202ENST00000373474 SLC25A48Q6ZT89 311 aaKnown RBP11.76□□□□□ -0.53
LMX1B-202ENST00000373474 ZNF48Q96MX3 618 aaPredicted RBP11.76□□□□□ -0.53
LMX1B-202ENST00000373474 IGHV3OR16-13A0A075B7E8 117 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 IGHV3-74A0A0B4J1X5 117 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 GUSBP1Q15486 140 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 ADAMTSL5Q6ZMM2 481 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 MLNRO43193 412 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 IGKV3-20P01619 116 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 NBR2O15453 112 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 TREML4Q6UXN2 200 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 SEPSECSQ9HD40 501 aaKnown RBP11.75□□□□□ -0.53
LMX1B-202ENST00000373474 PSG8Q9UQ74 426 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 PYYP10082 97 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 ATP5J2P56134 94 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 RPRMLQ8N4K4 120 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 TMEM133Q9H2Q1 129 aa11.75□□□□□ -0.53
LMX1B-202ENST00000373474 GFRA3O60609 400 aa11.74□□□□□ -0.53
LMX1B-202ENST00000373474 PYY3Q5JQD4 70 aa11.74□□□□□ -0.53
LMX1B-202ENST00000373474 FAM90A2PQ658T7 463 aa11.74□□□□□ -0.53
LMX1B-202ENST00000373474 ZNF688P0C7X2 276 aa11.74□□□□□ -0.53
LMX1B-202ENST00000373474 CFPP27918 469 aa11.74□□□□□ -0.53
LMX1B-202ENST00000373474 FHL1Q13642 323 aa11.74□□□□□ -0.53
LMX1B-202ENST00000373474 ABHD17AQ96GS6 310 aa11.74□□□□□ -0.53
LMX1B-202ENST00000373474 AGMATQ9BSE5 352 aa11.74□□□□□ -0.53
LMX1B-202ENST00000373474 MPV17L2Q567V2 206 aa11.74□□□□□ -0.53
LMX1B-202ENST00000373474 CLEC19AQ6UXS0 136 aa11.74□□□□□ -0.53
LMX1B-202ENST00000373474 LY96Q9Y6Y9 160 aa11.74□□□□□ -0.53
LMX1B-202ENST00000373474 CD300EQ496F6 205 aaPredicted RBP11.73□□□□□ -0.53
LMX1B-202ENST00000373474 GTSCR1Q86UQ5 136 aa11.73□□□□□ -0.53
LMX1B-202ENST00000373474 IGHV3-49A0A0A0MS15 119 aa11.73□□□□□ -0.53
LMX1B-202ENST00000373474 TRBV6-6A0A0A6YYG2 114 aa11.73□□□□□ -0.53
LMX1B-202ENST00000373474 RNF144BQ7Z419 303 aa11.73□□□□□ -0.53
LMX1B-202ENST00000373474 TSC2P49815 1807 aa11.73□□□□□ -0.53
LMX1B-202ENST00000373474 C5orf63A6NC05 138 aa11.73□□□□□ -0.53
LMX1B-202ENST00000373474 GGTLC1Q9BX51 225 aa11.73□□□□□ -0.53
LMX1B-202ENST00000373474 MYLKQ15746 1914 aa11.73□□□□□ -0.53
LMX1B-202ENST00000373474 THSD7BQ9C0I4 1608 aa11.72□□□□□ -0.53
LMX1B-202ENST00000373474 E9PQ18 207 aa11.72□□□□□ -0.53
LMX1B-202ENST00000373474 DOCK6Q96HP0 2047 aa11.72□□□□□ -0.53
LMX1B-202ENST00000373474 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
LMX1B-202ENST00000373474 LINC01587Q99440 93 aa11.72□□□□□ -0.53
LMX1B-202ENST00000373474 CRIM1Q9NZV1 1036 aa11.72□□□□□ -0.53
LMX1B-202ENST00000373474 IGKV1-5P01602 117 aa11.72□□□□□ -0.53
LMX1B-202ENST00000373474 HGFACQ04756 655 aa11.72□□□□□ -0.53
LMX1B-202ENST00000373474 CST9LQ9H4G1 147 aa11.72□□□□□ -0.53
LMX1B-202ENST00000373474 VWA8A3KMH1 1905 aa11.72□□□□□ -0.53
LMX1B-202ENST00000373474 DUSP14O95147 198 aaKnown RBP11.72□□□□□ -0.53
LMX1B-202ENST00000373474 C8orf46Q8TAG6 207 aa11.72□□□□□ -0.53
LMX1B-202ENST00000373474 A0A087X0K7 114 aa11.71□□□□□ -0.53
LMX1B-202ENST00000373474 C3orf79P0CE67 100 aa11.71□□□□□ -0.53
LMX1B-202ENST00000373474 FOXG1P55316 489 aaPredicted RBP11.71□□□□□ -0.53
LMX1B-202ENST00000373474 TMEM14EPQ6UXP3 125 aa11.71□□□□□ -0.53
LMX1B-202ENST00000373474 TRGV11A0A075B6L2 103 aa11.71□□□□□ -0.53
LMX1B-202ENST00000373474 Q6ZS49 121 aa11.71□□□□□ -0.53
LMX1B-202ENST00000373474 FOXL2NBQ6ZUU3 175 aa11.71□□□□□ -0.53
LMX1B-202ENST00000373474 ZNF664Q8N3J9 261 aa11.71□□□□□ -0.53
LMX1B-202ENST00000373474 GATD1Q8NB37 220 aa11.71□□□□□ -0.53
LMX1B-202ENST00000373474 NAA38Q9BRA0 125 aaKnown RBP11.71□□□□□ -0.53
LMX1B-202ENST00000373474 IGHV1-46P01743 117 aa11.71□□□□□ -0.53
LMX1B-202ENST00000373474 CENPVQ7Z7K6 275 aaPredicted RBP11.71□□□□□ -0.53
LMX1B-202ENST00000373474 SPTBP11277 2137 aa11.71□□□□□ -0.54
LMX1B-202ENST00000373474 IGKV3D-20A0A0C4DH25 116 aa11.71□□□□□ -0.54
LMX1B-202ENST00000373474 ITGB1BP1O14713 200 aa11.71□□□□□ -0.54
LMX1B-202ENST00000373474 CD7P09564 240 aa11.71□□□□□ -0.54
LMX1B-202ENST00000373474 SYS1-DBNDD2H3BUS1 97 aa11.71□□□□□ -0.54
LMX1B-202ENST00000373474 LINC00158P58513 81 aa11.7□□□□□ -0.54
LMX1B-202ENST00000373474 PSG3Q16557 428 aa11.7□□□□□ -0.54
LMX1B-202ENST00000373474 SPATA31B1PQ5VZV4 182 aa11.7□□□□□ -0.54
LMX1B-202ENST00000373474 C20orf144Q9BQM9 153 aa11.7□□□□□ -0.54
LMX1B-202ENST00000373474 EVI2AP22794 236 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms