RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 FABP9Q0Z7S8 132 aa11.21□□□□□ -0.61
LDB3-204ENST00000372066 LINC01356Q8N9X3 169 aa11.21□□□□□ -0.61
LDB3-204ENST00000372066 F11RQ9Y624 299 aaKnown RBP11.21□□□□□ -0.61
LDB3-204ENST00000372066 SCO2A0A1W2PP80 73 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 COX7A2P2O60397 106 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 OR7C2O60412 319 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 GGCTO75223 188 aaKnown RBP11.2□□□□□ -0.62
LDB3-204ENST00000372066 TYMSP04818 313 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 LCN2P80188 198 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 CCDC144NLQ6NUI1 221 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 TMEM116Q8NCL8 245 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 STXBP6Q8NFX7 210 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 OR1L6Q8NGR2 347 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 OR2T6Q8NHC8 308 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 NPIPB3Q92617 1050 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 RITA1Q96K30 269 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 IGKV1D-37A0A075B6S9 117 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 TCF21O43680 179 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 FOXH1O75593 365 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 FAM3BP58499 235 aaPredicted RBP11.2□□□□□ -0.62
LDB3-204ENST00000372066 MLANAQ16655 118 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 MINOS1Q5TGZ0 78 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 C10orf113Q5VZT2 155 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 SRSF12Q8WXF0 261 aaKnown RBP11.2□□□□□ -0.62
LDB3-204ENST00000372066 MINOS1-NBL1R4GNA1 71 aa11.2□□□□□ -0.62
LDB3-204ENST00000372066 TRAV9-1A0A075B6T8 112 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 TEX22C9J3V5 150 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 PPP5D1E7EU14 171 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 NDUFA3O95167 84 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 TRGC2P03986 189 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 HOXA5P20719 270 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 CNTFRP26992 372 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 ARF6P62330 175 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 NPBQ8NG41 125 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 OR2T10Q8NGZ9 312 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 TMEM37Q8WXS4 190 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 CFHR4Q92496 578 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 ZNF503Q96F45 646 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 MISP3Q96FF7 219 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 SFRP2Q96HF1 295 aa11.19□□□□□ -0.62
LDB3-204ENST00000372066 TIMM23O14925 209 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 NBR2O15453 112 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 HIST1H2BKO60814 126 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 MOSP00540 346 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 HIST1H2BJP06899 126 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 HIST1H2BOP23527 126 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 GATA2P23769 480 aaPredicted RBP11.18□□□□□ -0.62
LDB3-204ENST00000372066 HIST1H2BBP33778 126 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 HIST1H2BDP58876 126 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 HIST1H2BCP62807 126 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 FOXL1Q12952 345 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 PLGLAQ15195 96 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 HIST2H2BEQ16778 126 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.18□□□□□ -0.62
LDB3-204ENST00000372066 TMEM190Q8WZ59 177 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 HIST1H2BHQ93079 126 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 FAM167A-AS1Q96KT0 104 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 HIST1H2BNQ99877 126 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 HIST1H2BMQ99879 126 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 DERL1Q9BUN8 251 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 FBXL15Q9H469 300 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 TNFRSF19Q9NS68 423 aa11.18□□□□□ -0.62
LDB3-204ENST00000372066 TRBV20OR9-2A0A075B6H5 130 aa11.17□□□□□ -0.62
LDB3-204ENST00000372066 REG1AP05451 166 aa11.17□□□□□ -0.62
LDB3-204ENST00000372066 CDX1P47902 265 aaPredicted RBP11.17□□□□□ -0.62
LDB3-204ENST00000372066 PLP1P60201 277 aa11.17□□□□□ -0.62
LDB3-204ENST00000372066 UBE2L3P68036 154 aaKnown RBP11.17□□□□□ -0.62
LDB3-204ENST00000372066 HCP5Q6MZN7 132 aa11.17□□□□□ -0.62
LDB3-204ENST00000372066 OR4X1Q8NH49 305 aa11.17□□□□□ -0.62
LDB3-204ENST00000372066 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
LDB3-204ENST00000372066 ANK2Q01484 3957 aa11.17□□□□□ -0.62
LDB3-204ENST00000372066 FABP1P07148 127 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 DLX1P56177 255 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 MMDQ15546 238 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 OR5AU1Q8NGC0 362 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 OR10G8Q8NGN5 311 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 ZNF355PQ9NSJ1 428 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 TBL2Q9Y4P3 447 aaKnown RBP11.16□□□□□ -0.62
LDB3-204ENST00000372066 A0A1W2PPQ1 181 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 B4DSR2 109 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 PHOX2AO14813 284 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 TRGC1P0CF51 173 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 MFAP2P55001 183 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 NDUFA6P56556 154 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 TEX38Q6PEX7 206 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 C12orf54Q6X4T0 127 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 NECAP1Q8NC96 275 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 EAF1Q96JC9 268 aaPredicted RBP11.16□□□□□ -0.62
LDB3-204ENST00000372066 PAXXQ9BUH6 204 aa11.16□□□□□ -0.62
LDB3-204ENST00000372066 HELTA6NFD8 242 aa11.15□□□□□ -0.62
LDB3-204ENST00000372066 PCP4L1A6NKN8 68 aa11.15□□□□□ -0.62
LDB3-204ENST00000372066 OR10J4P0C629 311 aa11.15□□□□□ -0.62
LDB3-204ENST00000372066 GNG4P50150 75 aa11.15□□□□□ -0.62
LDB3-204ENST00000372066 TAS2R60P59551 318 aa11.15□□□□□ -0.62
LDB3-204ENST00000372066 SSBP2P81877 361 aaPredicted RBP11.15□□□□□ -0.62
LDB3-204ENST00000372066 ZNF90Q03938 601 aa11.15□□□□□ -0.62
LDB3-204ENST00000372066 EBI3Q14213 229 aa11.15□□□□□ -0.62
LDB3-204ENST00000372066 OR5T1Q8NG75 326 aa11.15□□□□□ -0.62
LDB3-204ENST00000372066 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
LDB3-204ENST00000372066 FRZBQ92765 325 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms