RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 CLVS1Q8IUQ0 354 aaPredicted RBP9.46□□□□□ -0.9
RPF1-201ENST00000370654 DYNC2LI1Q8TCX1 351 aa9.46□□□□□ -0.9
RPF1-201ENST00000370654 DIRAS2Q96HU8 199 aa9.46□□□□□ -0.9
RPF1-201ENST00000370654 NARS2Q96I59 477 aaKnown RBP9.46□□□□□ -0.9
RPF1-201ENST00000370654 WDR12Q9GZL7 423 aaKnown RBP9.46□□□□□ -0.9
RPF1-201ENST00000370654 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.9
RPF1-201ENST00000370654 SULT1A3P0DMM9 295 aa9.45□□□□□ -0.9
RPF1-201ENST00000370654 SULT1A4P0DMN0 295 aa9.45□□□□□ -0.9
RPF1-201ENST00000370654 MRPS10P82664 201 aaKnown RBP9.45□□□□□ -0.9
RPF1-201ENST00000370654 TMEM41BQ5BJD5 291 aa9.45□□□□□ -0.9
RPF1-201ENST00000370654 SIGLEC15Q6ZMC9 328 aa9.45□□□□□ -0.9
RPF1-201ENST00000370654 MRPS26Q9BYN8 205 aaKnown RBP9.45□□□□□ -0.9
RPF1-201ENST00000370654 NRN1Q9NPD7 142 aa9.45□□□□□ -0.9
RPF1-201ENST00000370654 HSPB7Q9UBY9 170 aa9.45□□□□□ -0.9
RPF1-201ENST00000370654 TRAV10A0A0B4J240 114 aa9.44□□□□□ -0.9
RPF1-201ENST00000370654 SCGB2A1O75556 95 aa9.44□□□□□ -0.9
RPF1-201ENST00000370654 IFNA10P01566 189 aa9.44□□□□□ -0.9
RPF1-201ENST00000370654 IGKV3-20P01619 116 aa9.44□□□□□ -0.9
RPF1-201ENST00000370654 AKR1C4P17516 323 aa9.44□□□□□ -0.9
RPF1-201ENST00000370654 TCTAP57738 103 aa9.44□□□□□ -0.9
RPF1-201ENST00000370654 GAMTQ14353 236 aa9.44□□□□□ -0.9
RPF1-201ENST00000370654 DTD1Q8TEA8 209 aa9.44□□□□□ -0.9
RPF1-201ENST00000370654 IL22RA2Q969J5 263 aa9.44□□□□□ -0.9
RPF1-201ENST00000370654 PRRT1Q99946 306 aa9.44□□□□□ -0.9
RPF1-201ENST00000370654 SOSTQ9BQB4 213 aa9.44□□□□□ -0.9
RPF1-201ENST00000370654 GSTZ1O43708 216 aaPredicted RBP9.43□□□□□ -0.9
RPF1-201ENST00000370654 HLA-DRB4P13762 266 aa9.43□□□□□ -0.9
RPF1-201ENST00000370654 AP2S1P53680 142 aaPredicted RBP9.43□□□□□ -0.9
RPF1-201ENST00000370654 SMCO1Q147U7 214 aa9.43□□□□□ -0.9
RPF1-201ENST00000370654 ETFRF1Q6IPR1 90 aa9.43□□□□□ -0.9
RPF1-201ENST00000370654 LGI3Q8N145 548 aa9.43□□□□□ -0.9
RPF1-201ENST00000370654 RNF125Q96EQ8 232 aa9.43□□□□□ -0.9
RPF1-201ENST00000370654 PBDC1Q9BVG4 233 aa9.43□□□□□ -0.9
RPF1-201ENST00000370654 HLA-DRB4X5D2U9 266 aa9.43□□□□□ -0.9
RPF1-201ENST00000370654 DYNC1H1Q14204 4646 aaKnown RBP9.43□□□□□ -0.9
RPF1-201ENST00000370654 DEFB131BA0A096LNP1 70 aa9.42□□□□□ -0.9
RPF1-201ENST00000370654 A0A0B4J2A0 478 aa9.42□□□□□ -0.9
RPF1-201ENST00000370654 SOCS3O14543 225 aa9.42□□□□□ -0.9
RPF1-201ENST00000370654 EIF2B2P49770 351 aaKnown RBP9.42□□□□□ -0.9
RPF1-201ENST00000370654 CCR6P51684 374 aa9.42□□□□□ -0.9
RPF1-201ENST00000370654 OR2F1Q13607 317 aa9.42□□□□□ -0.9
RPF1-201ENST00000370654 KLF9Q13886 244 aaPredicted RBP9.42□□□□□ -0.9
RPF1-201ENST00000370654 ZNF705AQ6ZN79 300 aaPredicted RBP9.42□□□□□ -0.9
RPF1-201ENST00000370654 C17orf77Q96MU5 243 aa9.42□□□□□ -0.9
RPF1-201ENST00000370654 SLIRPQ9GZT3 109 aaKnown RBP9.42□□□□□ -0.9
RPF1-201ENST00000370654 MCUBQ9NWR8 336 aa9.42□□□□□ -0.9
RPF1-201ENST00000370654 CCDC59Q9P031 241 aaKnown RBP9.42□□□□□ -0.9
RPF1-201ENST00000370654 SHPKQ9UHJ6 478 aa9.42□□□□□ -0.9
RPF1-201ENST00000370654 U3KQ87 197 aa9.42□□□□□ -0.9
RPF1-201ENST00000370654 IGKV1OR2-108A0A075B7D4 117 aa9.41□□□□□ -0.9
RPF1-201ENST00000370654 F6UB75 175 aa9.41□□□□□ -0.9
RPF1-201ENST00000370654 PITX3O75364 302 aa9.41□□□□□ -0.9
RPF1-201ENST00000370654 TNFSF8P32971 234 aa9.41□□□□□ -0.9
RPF1-201ENST00000370654 SNRPD3P62318 126 aaKnown RBP9.41□□□□□ -0.9
RPF1-201ENST00000370654 ZNF709Q8N972 641 aa9.41□□□□□ -0.9
RPF1-201ENST00000370654 LINC00052Q96N35 136 aa9.41□□□□□ -0.9
RPF1-201ENST00000370654 RNF126Q9BV68 326 aa9.41□□□□□ -0.9
RPF1-201ENST00000370654 SEPSECSQ9HD40 501 aaKnown RBP9.41□□□□□ -0.9
RPF1-201ENST00000370654 KCNIP3Q9Y2W7 256 aa9.41□□□□□ -0.9
RPF1-201ENST00000370654 PCLOQ9Y6V0 5065 aa9.4□□□□□ -0.9
RPF1-201ENST00000370654 A0A1B0GVY2 172 aa9.4□□□□□ -0.9
RPF1-201ENST00000370654 ZFP92A6NM28 416 aa9.4□□□□□ -0.9
RPF1-201ENST00000370654 ZNF705FA8MVS1 300 aaPredicted RBP9.4□□□□□ -0.9
RPF1-201ENST00000370654 ZNF705DP0CH99 300 aaPredicted RBP9.4□□□□□ -0.9
RPF1-201ENST00000370654 ZNF705BP0CI00 300 aaPredicted RBP9.4□□□□□ -0.9
RPF1-201ENST00000370654 IAPPP10997 89 aa9.4□□□□□ -0.9
RPF1-201ENST00000370654 NKX2-1P43699 371 aaPredicted RBP9.4□□□□□ -0.9
RPF1-201ENST00000370654 EMP1P54849 157 aa9.4□□□□□ -0.9
RPF1-201ENST00000370654 LYZP61626 148 aa9.4□□□□□ -0.9
RPF1-201ENST00000370654 C20orf173Q96LM9 149 aa9.4□□□□□ -0.9
RPF1-201ENST00000370654 SLC35B3Q9H1N7 401 aa9.4□□□□□ -0.9
RPF1-201ENST00000370654 IGHV3OR16-12A0A075B7B8 117 aa9.39□□□□□ -0.91
RPF1-201ENST00000370654 AMBPP02760 352 aa9.39□□□□□ -0.91
RPF1-201ENST00000370654 TMEM182Q6ZP80 229 aaPredicted RBP9.39□□□□□ -0.91
RPF1-201ENST00000370654 NOXA1Q86UR1 476 aa9.39□□□□□ -0.91
RPF1-201ENST00000370654 OR1S1Q8NH92 325 aa9.39□□□□□ -0.91
RPF1-201ENST00000370654 RAB2BQ8WUD1 216 aa9.39□□□□□ -0.91
RPF1-201ENST00000370654 SAV1Q9H4B6 383 aaPredicted RBP9.39□□□□□ -0.91
RPF1-201ENST00000370654 SCP2D1Q9UJQ7 156 aa9.39□□□□□ -0.91
RPF1-201ENST00000370654 H3BMQ9 156 aa9.38□□□□□ -0.91
RPF1-201ENST00000370654 M0R2N4 97 aa9.38□□□□□ -0.91
RPF1-201ENST00000370654 GPX4P36969 197 aaPredicted RBP9.38□□□□□ -0.91
RPF1-201ENST00000370654 TMBIM6P55061 237 aa9.38□□□□□ -0.91
RPF1-201ENST00000370654 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
RPF1-201ENST00000370654 OR8G2PQ6IF36 304 aa9.38□□□□□ -0.91
RPF1-201ENST00000370654 TMED4Q7Z7H5 227 aa9.38□□□□□ -0.91
RPF1-201ENST00000370654 C1orf158Q8N1D5 194 aa9.38□□□□□ -0.91
RPF1-201ENST00000370654 TRIM63Q969Q1 353 aa9.38□□□□□ -0.91
RPF1-201ENST00000370654 SLC35E1Q96K37 410 aa9.38□□□□□ -0.91
RPF1-201ENST00000370654 C1QTNF4Q9BXJ3 329 aa9.38□□□□□ -0.91
RPF1-201ENST00000370654 MAGT1Q9H0U3 335 aa9.38□□□□□ -0.91
RPF1-201ENST00000370654 RSL24D1Q9UHA3 163 aaKnown RBP9.38□□□□□ -0.91
RPF1-201ENST00000370654 DNAH11Q96DT5 4516 aa9.38□□□□□ -0.91
RPF1-201ENST00000370654 FABP12A6NFH5 140 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 PRSS46E5RG02 174 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 RTL8CO15255 209 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 PRM2P04554 102 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 GATA2P23769 480 aaPredicted RBP9.37□□□□□ -0.91
RPF1-201ENST00000370654 ZNF79Q15937 498 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 FOXI2Q6ZQN5 318 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms