RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 HLA-DRB1P01911 266 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 CR1LQ2VPA4 569 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 Q8NA96 180 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 EAF1Q96JC9 268 aaPredicted RBP4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 OSTCQ9NRP0 149 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 CLEC5AQ9NY25 188 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 SOX21Q9Y651 276 aaPredicted RBP4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 LY96Q9Y6Y9 160 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 EXPH5Q8NEV8 1989 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 IGHV3OR16-10A0A075B7F0 116 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 C9JCJ5 164 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 WISP2O76076 250 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 AREGP15514 252 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 PRB3Q04118 309 aaPredicted RBP4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 FAM90A2PQ658T7 463 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 MIEN1Q9BRT3 115 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 CDC42EP3Q9UKI2 254 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 B4DSR2 109 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 GPR183P32249 361 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 LEMD1Q68G75 181 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 FAM53AQ6NSI3 398 aaPredicted RBP4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 C1orf122Q6ZSJ8 110 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 TCF23Q7RTU1 214 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 ATOH7Q8N100 152 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 KIR3DL3Q8N743 410 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 LYPD6BQ8NI32 183 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 Q9H3A6 140 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 SEPSECSQ9HD40 501 aaKnown RBP4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 PLA2G2EQ9NZK7 142 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 EPDR1Q9UM22 224 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 MOB4Q9Y3A3 225 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 CUL9Q8IWT3 2517 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 OR2T8A6NH00 312 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 DLEU1O43261 78 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 MMP23AO75900 390 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 TGFAP01135 160 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 TFPI2P48307 235 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 SAMD13Q5VXD3 122 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 NHLRC2Q8NBF2 726 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 CENPFP49454 3210 aa4.31□□□□□ -1.72
SMNDC1-202ENST00000369603 H3BTX0 84 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 SLC17A3O00476 420 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 NPFFO15130 113 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 SERF1AO75920 110 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 LY6HO94772 140 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 MYOD1P15172 320 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 SLC25A16P16260 332 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 CD24P25063 80 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 UBE2E1P51965 193 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 ZNF137PP52743 207 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 RHOGP84095 191 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 KLRD1Q13241 179 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 C1orf194Q5T5A4 169 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 Q6AWC8 147 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 CENPVQ7Z7K6 275 aaPredicted RBP4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 CIARTQ8N365 385 aaPredicted RBP4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 BPESC1Q9GZL8 116 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 A0A1W2PPI3 338 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 A1L4Q6 167 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 PGPEP1LA6NFU8 196 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 SRIP30626 198 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 CX3CL1P78423 397 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 TEX38Q6PEX7 206 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 ZNF562Q6V9R5 426 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 C19orf35Q6ZS72 473 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 HAPLN4Q86UW8 402 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 OCC1Q8TAD7 63 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 SLC50A1Q9BRV3 221 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 ZFP30Q9Y2G7 519 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 WDR87Q6ZQQ6 2873 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 TRAV40A0A0B4J280 105 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 PYYP10082 97 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 PSG1P11464 419 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 CD33P20138 364 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 HBBP68871 147 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 TM4SF20Q53R12 229 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 TMEM256Q8N2U0 113 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 CYYR1Q96J86 154 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 SNHG12Q9BXW3 62 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 TMEM191AQ9H0A3 160 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 JKAMPQ9P055 326 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 HSPB8Q9UJY1 196 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 TMSB15BA0A087X1C1 80 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 A0A1B0GW15 77 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 GATA3P23771 443 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 ADMP35318 185 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 FOXL1Q12952 345 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 VWC2Q2TAL6 325 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 EBLN2Q6P2I7 272 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 CLEC19AQ6UXS0 136 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 LINC01551Q86U37 167 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 DYNLRB2Q8TF09 96 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 TMEM208Q9BTX3 173 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 RPP21Q9H633 154 aaKnown RBP4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 ZNRD1Q9P1U0 126 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 CTSZQ9UBR2 303 aa4.3□□□□□ -1.72
SMNDC1-202ENST00000369603 IGKV3-7A0A075B6H7 116 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 IGHV3-35A0A0C4DH35 117 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 IZUMO1RA6ND01 250 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 MSMPQ1L6U9 139 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms