RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 D6R8Y8 96 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 PLXNB3Q9ULL4 1909 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 CENPVL1A0A0U1RR11 272 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 LILRA1O75019 489 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 TMEM52Q8NDY8 209 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 FOXS1O43638 330 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 DENND4CQ5VZ89 1909 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 C6orf226Q5I0X4 101 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 LILRA6Q6PI73 481 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 NEU4Q8WWR8 484 aaPredicted RBP7.78□□□□□ -1.16
VPS13A-203ENST00000360280 A0A0U1RRA0 63 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 IQCF6A8MYZ5 107 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 C9JAW5 83 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 C12orf77C9JDV5 145 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 NCR2O95944 276 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 PSG3Q16557 428 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 ANAPC1Q9H1A4 1944 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 EFNB3Q15768 340 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 PILRAQ9UKJ1 303 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 TCTEX1D4Q5JR98 221 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 KIAA1671Q9BY89 1806 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 TRBV24-1A0A075B6N3 115 aa7.77□□□□□ -1.16
VPS13A-203ENST00000360280 C8orf46Q8TAG6 207 aa7.77□□□□□ -1.16
VPS13A-203ENST00000360280 RTBDNQ9BSG5 229 aaPredicted RBP7.77□□□□□ -1.16
VPS13A-203ENST00000360280 KIAA1549LQ6ZVL6 1849 aa7.77□□□□□ -1.16
VPS13A-203ENST00000360280 TRAV14DV4A0A0A6YYC5 116 aa7.77□□□□□ -1.16
VPS13A-203ENST00000360280 RNF222A6NCQ9 220 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 F8VVB4 439 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 F8VWA3 439 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 RAMP3O60896 148 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 BHLHA9Q7RTU4 235 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 FAM168AQ92567 244 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 OR13A1Q8NGR1 328 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 GLI3P10071 1580 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 SDK2Q58EX2 2172 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 FAM166AQ6J272 317 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 PSCAO43653 123 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 AMBPP02760 352 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 CD160O95971 181 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 MPV17L2Q567V2 206 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 UBE2DNLQ8IWF7 75 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 C18orf12Q96KH6 178 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 MPZP25189 248 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 C1orf122Q6ZSJ8 110 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 MRPL27Q9P0M9 148 aaKnown RBP7.77□□□□□ -1.17
VPS13A-203ENST00000360280 MGAMO43451 1857 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 SYS1-DBNDD2H3BUS1 97 aa7.77□□□□□ -1.17
VPS13A-203ENST00000360280 RPL36AP83881 106 aaKnown RBP7.77□□□□□ -1.17
VPS13A-203ENST00000360280 RPL36ALQ969Q0 106 aaKnown RBP7.77□□□□□ -1.17
VPS13A-203ENST00000360280 CMC4P56277 68 aaPredicted RBP7.76□□□□□ -1.17
VPS13A-203ENST00000360280 A0A087X0K7 114 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 PSG8Q9UQ74 426 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 SS18Q15532 418 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 A0A1W2PQF6 199 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 UTF1Q5T230 341 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 GLMPQ8WWB7 406 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 DSCR8Q96T75 97 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 S4R3C0 116 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 YPEL1O60688 119 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 PSG1P11464 419 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 BSPH1Q075Z2 132 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 YPEL2Q96QA6 119 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 F8W1H4 67 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 VCYO14598 125 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 SRD5A1P18405 259 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.76□□□□□ -1.17
VPS13A-203ENST00000360280 CRIM1Q9NZV1 1036 aa7.76□□□□□ -1.17
VPS13A-203ENST00000360280 VWA8A3KMH1 1905 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 RCHY1Q96PM5 261 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 NOTCH3Q9UM47 2321 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 PIN1P1O15428 100 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 TRBV6-7A0A0A0MS04 114 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 WFDC6Q9BQY6 131 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 SNHG12Q9BXW3 62 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 CRYBA2P53672 197 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 CD33P20138 364 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 PRIMA1Q86XR5 153 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 C1QTNF4Q9BXJ3 329 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 A0A1B0GTI1 187 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 NDUFC2O95298 119 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 OCC1Q8TAD7 63 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 ATP6V0BQ99437 205 aa7.75□□□□□ -1.17
VPS13A-203ENST00000360280 A0A1B0GW64 132 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 ATRAIDQ6UW56 229 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 IGHV3OR16-8A0A075B7F1 116 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 TRAV1-1A0A0B4J248 108 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 IGKV1-8A0A0C4DH67 115 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 PRCDQ00LT1 54 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 FHL5Q5TD97 284 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 ZNF497Q6ZNH5 498 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 NRXN2Q9P2S2 1712 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 WISP3O95389 354 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-203ENST00000360280 NPIPB5A8MRT5 1133 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 SMAD7O15105 426 aaKnown RBP7.74□□□□□ -1.17
VPS13A-203ENST00000360280 COX6A1P12074 109 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 PPDPFLQ8WWR9 84 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 SRXN1Q9BYN0 137 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 PRSS22Q9GZN4 317 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 IGHV3OR16-10A0A075B7F0 116 aa7.74□□□□□ -1.17
VPS13A-203ENST00000360280 LOC102723996A0A087X1L8 192 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms