RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 MEF2BQ02080 365 aaPredicted RBP10.59□□□□□ -0.71
CCDC197-201ENST00000359253 ZNF90Q03938 601 aa10.59□□□□□ -0.71
CCDC197-201ENST00000359253 TMEM219Q86XT9 240 aa10.59□□□□□ -0.71
CCDC197-201ENST00000359253 OR5T1Q8NG75 326 aa10.59□□□□□ -0.71
CCDC197-201ENST00000359253 RXFP4Q8TDU9 374 aa10.59□□□□□ -0.71
CCDC197-201ENST00000359253 FAM223BA6NKX1 122 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 C9JQL5 133 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 AP4M1O00189 453 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 PDE6DO43924 150 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 TOMM40O96008 361 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 RD3LP0DJH9 198 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 ARL14EPLP0DKL9 152 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 ADCYAP1P18509 176 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 GCHFRP30047 84 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 DEFA5Q01523 94 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 LY6EQ16553 131 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 ECSCRQ19T08 205 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 FAM74A3Q4VXF1 159 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 C19orf54Q5BKX5 351 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 FAM223AQ8IWN6 122 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 TMEM86BQ8N661 226 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 OR51G1Q8NGK1 321 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 Q8WTZ3 238 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 TMEM37Q8WXS4 190 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 NKX6-2Q9C056 277 aaPredicted RBP10.58□□□□□ -0.72
CCDC197-201ENST00000359253 FBXL7Q9UJT9 491 aa10.58□□□□□ -0.72
CCDC197-201ENST00000359253 NIPBLQ6KC79 2804 aaeCLIP10.58□□□□□ -0.72
CCDC197-201ENST00000359253 NSD1Q96L73 2696 aaPredicted RBP10.57□□□□□ -0.72
CCDC197-201ENST00000359253 TRBV7-1A0A0A6YYK4 115 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 F6UZH7 168 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 HMGB3O15347 200 aaKnown RBP10.57□□□□□ -0.72
CCDC197-201ENST00000359253 OR2J3O76001 311 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 NDUFB8O95169 186 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 IGKV1-17P01599 117 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 IGHV3-48P01763 117 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 GATA2P23769 480 aaPredicted RBP10.57□□□□□ -0.72
CCDC197-201ENST00000359253 FAM209BQ5JX69 171 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 C19orf35Q6ZS72 473 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 IQCF2Q8IXL9 164 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 EEF1AKMT3Q96AZ1 226 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 VPREB3Q9UKI3 123 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 PLXNB1O43157 2135 aa10.57□□□□□ -0.72
CCDC197-201ENST00000359253 IGHV3-21A0A0B4J1V1 117 aa10.56□□□□□ -0.72
CCDC197-201ENST00000359253 TMEM89A2RUT3 159 aa10.56□□□□□ -0.72
CCDC197-201ENST00000359253 OR2C1O95371 312 aa10.56□□□□□ -0.72
CCDC197-201ENST00000359253 PSG1P11464 419 aa10.56□□□□□ -0.72
CCDC197-201ENST00000359253 SRD5A1P18405 259 aa10.56□□□□□ -0.72
CCDC197-201ENST00000359253 SRP14P37108 136 aaKnown RBP10.56□□□□□ -0.72
CCDC197-201ENST00000359253 TIGITQ495A1 244 aa10.56□□□□□ -0.72
CCDC197-201ENST00000359253 Q56UQ5 140 aa10.56□□□□□ -0.72
CCDC197-201ENST00000359253 MIR17HGQ75NE6 70 aa10.56□□□□□ -0.72
CCDC197-201ENST00000359253 BCL6BQ8N143 479 aaPredicted RBP10.56□□□□□ -0.72
CCDC197-201ENST00000359253 USMG5Q96IX5 58 aa10.56□□□□□ -0.72
CCDC197-201ENST00000359253 TMPRSS5Q9H3S3 457 aa10.56□□□□□ -0.72
CCDC197-201ENST00000359253 HIGD1AQ9Y241 93 aa10.56□□□□□ -0.72
CCDC197-201ENST00000359253 FN1P02751 2386 aaKnown RBP10.55□□□□□ -0.72
CCDC197-201ENST00000359253 A0A1W2PRE2 83 aa10.55□□□□□ -0.72
CCDC197-201ENST00000359253 NUPL2O15504 423 aaKnown RBP10.55□□□□□ -0.72
CCDC197-201ENST00000359253 PAGE4O60829 102 aa10.55□□□□□ -0.72
CCDC197-201ENST00000359253 IGHV4-59P01825 116 aa10.55□□□□□ -0.72
CCDC197-201ENST00000359253 CD81P60033 236 aa10.55□□□□□ -0.72
CCDC197-201ENST00000359253 RHOGP84095 191 aa10.55□□□□□ -0.72
CCDC197-201ENST00000359253 C9orf152Q5JTZ5 239 aa10.55□□□□□ -0.72
CCDC197-201ENST00000359253 PATE2Q6UY27 113 aa10.55□□□□□ -0.72
CCDC197-201ENST00000359253 LINC00305Q7Z4B0 112 aa10.55□□□□□ -0.72
CCDC197-201ENST00000359253 OR1B1Q8NGR6 318 aa10.55□□□□□ -0.72
CCDC197-201ENST00000359253 TCEAL7Q9BRU2 100 aa10.55□□□□□ -0.72
CCDC197-201ENST00000359253 ZNF355PQ9NSJ1 428 aa10.55□□□□□ -0.72
CCDC197-201ENST00000359253 MRPL27Q9P0M9 148 aaKnown RBP10.55□□□□□ -0.72
CCDC197-201ENST00000359253 SOX21Q9Y651 276 aaPredicted RBP10.55□□□□□ -0.72
CCDC197-201ENST00000359253 SONP18583 2426 aaKnown RBP10.54□□□□□ -0.72
CCDC197-201ENST00000359253 WI2-2373I1.2A0A1W2PRP0 233 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 LINC01548A6NM66 108 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 C11orf94C9JXX5 98 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 G3V318 75 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 OR7C2O60412 319 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 ORM2P19652 201 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 PPIFP30405 207 aaKnown RBP10.54□□□□□ -0.72
CCDC197-201ENST00000359253 ATP5G2Q06055 141 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 PNRC1Q12796 327 aaPredicted RBP10.54□□□□□ -0.72
CCDC197-201ENST00000359253 C15orf32Q32M92 178 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 SPATA31B1PQ5VZV4 182 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 CYB561D1Q8N8Q1 229 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 ZNF502Q8TBZ5 544 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 FAM167A-AS1Q96KT0 104 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 UHRF2Q96PU4 802 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 NIPSNAP3BQ9BS92 247 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 PRSS22Q9GZN4 317 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 OR51M1Q9H341 326 aa10.54□□□□□ -0.72
CCDC197-201ENST00000359253 NAV3Q8IVL0 2385 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 SETD2Q9BYW2 2564 aaPredicted RBP10.53□□□□□ -0.72
CCDC197-201ENST00000359253 A0A0G2JLM5 398 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 MDFIC2A0A1B0GVS7 189 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 B4DEV8 164 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 F8W735 103 aaPredicted RBP10.53□□□□□ -0.72
CCDC197-201ENST00000359253 RHEBQ15382 184 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 GUCA2BQ16661 112 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 CST9LP1Q5W188 147 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 ZNF600Q6ZNG1 722 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 ZNF491Q8N8L2 437 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms