RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 UFC1Q9Y3C8 167 aa11.65□□□□□ -0.54
TPM1-206ENST00000358278 CMYA5Q8N3K9 4069 aa11.65□□□□□ -0.55
TPM1-206ENST00000358278 AGPAT2O15120 278 aa11.64□□□□□ -0.55
TPM1-206ENST00000358278 MPDU1O75352 247 aa11.64□□□□□ -0.55
TPM1-206ENST00000358278 IL4P05112 153 aa11.64□□□□□ -0.55
TPM1-206ENST00000358278 CAMLGP49069 296 aa11.64□□□□□ -0.55
TPM1-206ENST00000358278 ZNF266Q14584 549 aa11.64□□□□□ -0.55
TPM1-206ENST00000358278 CYP2G1PQ6ZSU1 146 aa11.64□□□□□ -0.55
TPM1-206ENST00000358278 BPIFCQ8NFQ6 507 aa11.64□□□□□ -0.55
TPM1-206ENST00000358278 HYLS1Q96M11 299 aa11.64□□□□□ -0.55
TPM1-206ENST00000358278 MGST2Q99735 147 aa11.64□□□□□ -0.55
TPM1-206ENST00000358278 A8MWP6 167 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 GATA2P23769 480 aaPredicted RBP11.63□□□□□ -0.55
TPM1-206ENST00000358278 EIF2B2P49770 351 aaKnown RBP11.63□□□□□ -0.55
TPM1-206ENST00000358278 SELENOTP62341 195 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 SCGB1C1Q8TD33 95 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 ZNF414Q96IQ9 312 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 PBDC1Q9BVG4 233 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 ELOVL1Q9BW60 279 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 WDR61Q9GZS3 305 aaKnown RBP11.63□□□□□ -0.55
TPM1-206ENST00000358278 ZFAND3Q9H8U3 227 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 WFDC1Q9HC57 220 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 DAZ1Q9NQZ3 744 aaKnown RBP11.63□□□□□ -0.55
TPM1-206ENST00000358278 ZNF207O43670 478 aaKnown RBP11.63□□□□□ -0.55
TPM1-206ENST00000358278 LYZP61626 148 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 TM4SF20Q53R12 229 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 RNF125Q96EQ8 232 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 GGTLC1Q9BX51 225 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 NPCDR1Q9BY65 106 aa11.63□□□□□ -0.55
TPM1-206ENST00000358278 A0A0D9SG52 128 aa11.62□□□□□ -0.55
TPM1-206ENST00000358278 CFDP00746 253 aaPredicted RBP11.62□□□□□ -0.55
TPM1-206ENST00000358278 LINC00869P0C866 280 aa11.62□□□□□ -0.55
TPM1-206ENST00000358278 PRR31Q5SQ13 230 aa11.62□□□□□ -0.55
TPM1-206ENST00000358278 KCNRGQ8N5I3 272 aa11.62□□□□□ -0.55
TPM1-206ENST00000358278 ZNF709Q8N972 641 aa11.62□□□□□ -0.55
TPM1-206ENST00000358278 MGAM2Q2M2H8 2515 aa11.62□□□□□ -0.55
TPM1-206ENST00000358278 BORCS7-ASMTA0A0B4J1R7 106 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 KANTRA0A1W2PQU2 76 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 TMEM213A2RRL7 107 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 C2orf70A6NJV1 201 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 SEC14L6B5MCN3 397 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 TAAR5O14804 337 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 SAP30O75446 220 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 CXCL2P19875 107 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 ELLP55199 621 aaPredicted RBP11.61□□□□□ -0.55
TPM1-206ENST00000358278 TMEM182Q6ZP80 229 aaPredicted RBP11.61□□□□□ -0.55
TPM1-206ENST00000358278 METTL26Q96S19 204 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 ARPC5LQ9BPX5 153 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 MCRIP2Q9BUT9 160 aaKnown RBP11.61□□□□□ -0.55
TPM1-206ENST00000358278 ARL6Q9H0F7 186 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 SLC45A2Q9UMX9 530 aa11.61□□□□□ -0.55
TPM1-206ENST00000358278 WI2-2373I1.2A0A1W2PRP0 233 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 C17orf112F2Z3M2 114 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 K7EMT4 169 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 OPCMLQ14982 345 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 USF2Q15853 346 aaPredicted RBP11.6□□□□□ -0.55
TPM1-206ENST00000358278 STPG3Q8N7X2 389 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 WFDC9Q8NEX5 89 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 PARD6GQ9BYG4 376 aaPredicted RBP11.6□□□□□ -0.55
TPM1-206ENST00000358278 KCNIP2Q9NS61 270 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 RABAC1Q9UI14 185 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 SORL1Q92673 2214 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 FOLR2P14207 255 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 ORM2P19652 201 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 NPPCP23582 126 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 MIC13Q5XKP0 118 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 RPL7L1Q6DKI1 246 aaKnown RBP11.6□□□□□ -0.55
TPM1-206ENST00000358278 TMUB2Q71RG4 321 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 OR1B1Q8NGR6 318 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 NARS2Q96I59 477 aaKnown RBP11.6□□□□□ -0.55
TPM1-206ENST00000358278 RSG1Q9BU20 258 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 DOK5Q9P104 306 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 PXMP4Q9Y6I8 212 aa11.6□□□□□ -0.55
TPM1-206ENST00000358278 CSN3P07498 182 aa11.59□□□□□ -0.55
TPM1-206ENST00000358278 EDN2P20800 178 aa11.59□□□□□ -0.55
TPM1-206ENST00000358278 CBLN1P23435 193 aa11.59□□□□□ -0.55
TPM1-206ENST00000358278 RPL29P47914 159 aaKnown RBP11.59□□□□□ -0.55
TPM1-206ENST00000358278 B2MP61769 119 aa11.59□□□□□ -0.55
TPM1-206ENST00000358278 Q6ZRG5 221 aa11.59□□□□□ -0.55
TPM1-206ENST00000358278 HSD17B11Q8NBQ5 300 aa11.59□□□□□ -0.55
TPM1-206ENST00000358278 DYNLRB2Q8TF09 96 aa11.59□□□□□ -0.55
TPM1-206ENST00000358278 MARC2Q969Z3 335 aa11.59□□□□□ -0.55
TPM1-206ENST00000358278 IGHV3-49A0A0A0MS15 119 aa11.58□□□□□ -0.56
TPM1-206ENST00000358278 BCL2L11O43521 198 aa11.58□□□□□ -0.56
TPM1-206ENST00000358278 JTBO76095 146 aa11.58□□□□□ -0.56
TPM1-206ENST00000358278 HNRNPCP07910 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
TPM1-206ENST00000358278 IGLL1P15814 213 aa11.58□□□□□ -0.56
TPM1-206ENST00000358278 BMI1P35226 326 aa11.58□□□□□ -0.56
TPM1-206ENST00000358278 LGALSLQ3ZCW2 172 aaPredicted RBP11.58□□□□□ -0.56
TPM1-206ENST00000358278 C9orf66Q5T8R8 295 aa11.58□□□□□ -0.56
TPM1-206ENST00000358278 PPP1R14BQ96C90 147 aa11.58□□□□□ -0.56
TPM1-206ENST00000358278 MRPL27Q9P0M9 148 aaKnown RBP11.58□□□□□ -0.56
TPM1-206ENST00000358278 IGHV3OR16-13A0A075B7E8 117 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 IGHV3-74A0A0B4J1X5 117 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 IGHV7-4-1A0A0J9YVY3 117 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 HYPMO75409 117 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 OR5G3P0C626 314 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 CRYBB3P26998 211 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 PRR20EP86478 221 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 PRR20CP86479 221 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms