RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TRAV8-3A0A0A6YYJ7 113 aa14.4□□□□□ -0.1
COL27A1-201ENST00000356083 IGKV1-8A0A0C4DH67 115 aa14.4□□□□□ -0.1
COL27A1-201ENST00000356083 CSRP2Q16527 193 aa14.4□□□□□ -0.1
COL27A1-201ENST00000356083 CIARTQ8N365 385 aaPredicted RBP14.4□□□□□ -0.1
COL27A1-201ENST00000356083 VMO1Q7Z5L0 202 aa14.4□□□□□ -0.1
COL27A1-201ENST00000356083 SAXO1Q8IYX7 474 aa14.4□□□□□ -0.1
COL27A1-201ENST00000356083 GNLYP22749 145 aa14.4□□□□□ -0.1
COL27A1-201ENST00000356083 ZNF98A6NK75 572 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 LEPROTO15243 131 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 RAMP3O60896 148 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 PSG7Q13046 419 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 Q96M66 194 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 IGKCP01834 107 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 AQP3Q92482 292 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 C22orf46C9J442 243 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 TIMM23O14925 209 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 C15orf32Q32M92 178 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 HAPLN4Q86UW8 402 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 DKK4Q9UBT3 224 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 A8MWV9 139 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 PYYP10082 97 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 SP7Q8TDD2 431 aaPredicted RBP14.39□□□□□ -0.11
COL27A1-201ENST00000356083 TRAV12-1A0A0B4J245 112 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 RAMP1O60894 148 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 C9orf106Q8NAJ2 232 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 CFHR5Q9BXR6 569 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 TICRRQ7Z2Z1 1910 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 KIAA1551Q9HCM1 1747 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.39□□□□□ -0.11
COL27A1-201ENST00000356083 CLPSL2Q6UWE3 100 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 DEFB105AQ8NG35 78 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 OR10W1Q8NGF6 305 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 DMRT1Q9Y5R6 373 aa14.39□□□□□ -0.11
COL27A1-201ENST00000356083 IGHV3-16A0A0C4DH30 117 aa14.38□□□□□ -0.11
COL27A1-201ENST00000356083 FAM181AQ8N9Y4 354 aa14.38□□□□□ -0.11
COL27A1-201ENST00000356083 SAA2-SAA4A0A096LPE2 208 aa14.38□□□□□ -0.11
COL27A1-201ENST00000356083 SAA2P0DJI9 122 aaPredicted RBP14.38□□□□□ -0.11
COL27A1-201ENST00000356083 MGAMO43451 1857 aa14.38□□□□□ -0.11
COL27A1-201ENST00000356083 HLA-DQB1P01920 261 aa14.38□□□□□ -0.11
COL27A1-201ENST00000356083 TMEM187Q14656 261 aa14.38□□□□□ -0.11
COL27A1-201ENST00000356083 TNRC6AQ8NDV7 1962 aaKnown RBP14.38□□□□□ -0.11
COL27A1-201ENST00000356083 H3BUX3 64 aa14.38□□□□□ -0.11
COL27A1-201ENST00000356083 DMRTC2Q8IXT2 367 aaPredicted RBP14.38□□□□□ -0.11
COL27A1-201ENST00000356083 C12orf77C9JDV5 145 aa14.38□□□□□ -0.11
COL27A1-201ENST00000356083 RIPPLY2Q5TAB7 128 aa14.38□□□□□ -0.11
COL27A1-201ENST00000356083 GAGE2AQ6NT46 116 aa14.38□□□□□ -0.11
COL27A1-201ENST00000356083 A0A096LPF7 62 aa14.37□□□□□ -0.11
COL27A1-201ENST00000356083 TMEM30BQ3MIR4 351 aa14.37□□□□□ -0.11
COL27A1-201ENST00000356083 RCC1LQ96I51 464 aaKnown RBP14.37□□□□□ -0.11
COL27A1-201ENST00000356083 DOPEY1Q5JWR5 2465 aa14.37□□□□□ -0.11
COL27A1-201ENST00000356083 LTBP4Q8N2S1 1624 aa14.37□□□□□ -0.11
COL27A1-201ENST00000356083 LAGE3Q14657 143 aa14.37□□□□□ -0.11
COL27A1-201ENST00000356083 TEX43Q6ZNM6 134 aa14.37□□□□□ -0.11
COL27A1-201ENST00000356083 SPXQ9BT56 116 aa14.37□□□□□ -0.11
COL27A1-201ENST00000356083 DSCAMO60469 2012 aa14.37□□□□□ -0.11
COL27A1-201ENST00000356083 MBD3L4A6NDZ8 208 aaPredicted RBP14.37□□□□□ -0.11
COL27A1-201ENST00000356083 MBD3L3A6NE82 208 aaPredicted RBP14.37□□□□□ -0.11
COL27A1-201ENST00000356083 MBD3L5A6NJ08 208 aaPredicted RBP14.37□□□□□ -0.11
COL27A1-201ENST00000356083 MPTX1A8MV57 137 aa14.37□□□□□ -0.11
COL27A1-201ENST00000356083 UCP1P25874 307 aa14.37□□□□□ -0.11
COL27A1-201ENST00000356083 SPACA3Q8IXA5 215 aa14.37□□□□□ -0.11
COL27A1-201ENST00000356083 MBD3L2Q8NHZ7 208 aaPredicted RBP14.37□□□□□ -0.11
COL27A1-201ENST00000356083 LCTP09848 1927 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 CACNG8Q8WXS5 425 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 DANCRP0C864 163 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 DAD1P61803 113 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 EXOC3-AS1Q8N2X6 119 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 NAA38Q9BRA0 125 aaKnown RBP14.36□□□□□ -0.11
COL27A1-201ENST00000356083 OTORQ9NRC9 128 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 STRCP1A6NGW2 1772 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 PMS2P5A8MQ11 134 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 EPDR1Q9UM22 224 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 IZUMO1RA6ND01 250 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 TMEM133Q9H2Q1 129 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 DEPPQ9NTK1 212 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 ZNF660Q6AZW8 331 aaPredicted RBP14.36□□□□□ -0.11
COL27A1-201ENST00000356083 LINC00312Q9Y6C7 94 aa14.36□□□□□ -0.11
COL27A1-201ENST00000356083 PFN2P35080 140 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 POC1AQ8NBT0 407 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 HCFC1P51610 2035 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 A0A087WWL8 130 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 PCDH15Q96QU1 1955 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 TRAV41A0A0B4J266 112 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 SPSB3Q6PJ21 355 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 MBNL3Q9NUK0 354 aaKnown RBP14.35□□□□□ -0.11
COL27A1-201ENST00000356083 ORMDL2Q53FV1 153 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 C2orf82Q6UX34 121 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 C5orf30Q96GV9 206 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 A0A0G2JK05 382 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 ATP5L2Q7Z4Y8 100 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 ADMP35318 185 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 ZFAND6Q6FIF0 208 aa14.35□□□□□ -0.11
COL27A1-201ENST00000356083 KIF26AQ9ULI4 1882 aaPredicted RBP14.34□□□□□ -0.11
COL27A1-201ENST00000356083 LINC00477Q96M19 166 aa14.34□□□□□ -0.11
COL27A1-201ENST00000356083 RNF114Q9Y508 228 aa14.34□□□□□ -0.11
COL27A1-201ENST00000356083 MLNRO43193 412 aa14.34□□□□□ -0.11
COL27A1-201ENST00000356083 SLC25A38Q96DW6 304 aa14.34□□□□□ -0.11
COL27A1-201ENST00000356083 TGFBR3LH3BV60 316 aa14.34□□□□□ -0.11
COL27A1-201ENST00000356083 UCP3P55916 312 aa14.34□□□□□ -0.11
COL27A1-201ENST00000356083 PRIMA1Q86XR5 153 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms