RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 MLANAQ16655 118 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 GCSAMLQ5JQS6 135 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 TTC9CQ8N5M4 171 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 DNAH3Q8TD57 4116 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 NPIPB3Q92617 1050 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 RNF2Q99496 336 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 TRGV9Q99603 122 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 RARRES2Q99969 163 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 WNT10AQ9GZT5 417 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 VAX2Q9UIW0 290 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 MOB4Q9Y3A3 225 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 RYR3Q15413 4870 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 IGKV1D-37A0A075B6S9 117 aa10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 SNAPINO95295 136 aa10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 CXorf1O96002 111 aa10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 SRP19P09132 144 aaKnown RBP10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 SLC35E3Q7Z769 313 aa10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 RXFP4Q8TDU9 374 aa10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 RBM14Q96PK6 669 aaKnown RBP10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 PFDN5Q99471 154 aa10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 SLC25A33Q9BSK2 321 aa10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 MRPL32Q9BYC8 188 aaKnown RBP10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 VPREB3Q9UKI3 123 aa10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 DMRT1Q9Y5R6 373 aa10.55□□□□□ -0.72
HERPUD1-202ENST00000344114 I3L2K1 104 aa10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 HMGB3O15347 200 aaKnown RBP10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 OR5G3P0C626 314 aa10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 GUCA2BQ16661 112 aa10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 ASPHD1Q5U4P2 390 aa10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 C19orf35Q6ZS72 473 aa10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 C5orf56Q8N8D9 126 aa10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 OR1L4Q8NGR5 311 aa10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 MRAPQ8TCY5 172 aa10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 TMEM68Q96MH6 324 aa10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 FAM103A1Q9BTL3 118 aaKnown RBP10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 NKX6-2Q9C056 277 aaPredicted RBP10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 MRPL36Q9P0J6 103 aaKnown RBP10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
HERPUD1-202ENST00000344114 ARL14EPLP0DKL9 152 aa10.53□□□□□ -0.72
HERPUD1-202ENST00000344114 TAS2R45P59539 299 aa10.53□□□□□ -0.72
HERPUD1-202ENST00000344114 IQCF2Q8IXL9 164 aa10.53□□□□□ -0.72
HERPUD1-202ENST00000344114 OR4X1Q8NH49 305 aa10.53□□□□□ -0.72
HERPUD1-202ENST00000344114 GATAD1Q8WUU5 269 aa10.53□□□□□ -0.72
HERPUD1-202ENST00000344114 SSX3Q99909 188 aa10.53□□□□□ -0.72
HERPUD1-202ENST00000344114 IGLV11-55A0A075B6I3 123 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 PSMB11A5LHX3 300 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 K7EIM0 57 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 SCO1O75880 301 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 HIST1H1BP16401 226 aaKnown RBP10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 MEF2BQ02080 365 aaPredicted RBP10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 SOHLH1Q5JUK2 328 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 FAM78BQ5VT40 261 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 C16orf82Q7Z2V1 217 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 PIFOQ8TCI5 191 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 HSPB9Q9BQS6 159 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 TXNDC17Q9BRA2 123 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 TMPRSS5Q9H3S3 457 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 TECRQ9NZ01 308 aaKnown RBP10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 THYN1Q9P016 225 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 PITPNC1Q9UKF7 332 aa10.52□□□□□ -0.72
HERPUD1-202ENST00000344114 M0QZK8 103 aa10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 COX7A2P2O60397 106 aa10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 EIF3GO75821 320 aaKnown RBP eCLIP10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 IGHV3-48P01763 117 aa10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 FABP1P07148 127 aa10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 EGR2P11161 476 aaPredicted RBP10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 GATA2P23769 480 aaPredicted RBP10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 KLK9Q2XQG4 91 aa10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 PQLC2Q6ZP29 291 aa10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 CYB561D1Q8N8Q1 229 aa10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 SEPSECSQ9HD40 501 aaKnown RBP10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 KLK9Q9UKQ9 250 aa10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 ARL2-SNX15V9GYD0 113 aa10.52□□□□□ -0.73
HERPUD1-202ENST00000344114 ELOA3CA0A087WX78 387 aaPredicted RBP10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 A6NDX4 124 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 TMEM250H0YL14 139 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 H3BUX3 64 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 ATP6V0E1O15342 81 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 CLN5O75503 358 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 IGLC1P0CG04 106 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 GCHFRP30047 84 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 CRIP2P52943 208 aaPredicted RBP10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 SPATA31B1PQ5VZV4 182 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 ATRAIDQ6UW56 229 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 MIR17HGQ75NE6 70 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 CLRN3Q8NCR9 226 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 OR5R1Q8NH85 324 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 FANCD2OSQ96PS1 177 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 DNAJC4Q9NNZ3 241 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 TMEM167BQ9NRX6 74 aa10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 AURKAIP1Q9NWT8 199 aaPredicted RBP10.51□□□□□ -0.73
HERPUD1-202ENST00000344114 TRAV30A0A087WSZ9 112 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 IGHV3-21A0A0B4J1V1 117 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 PAGE4O60829 102 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 SCGB2A1O75556 95 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 C8orf88P0DMB2 117 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 NPBWR1P48145 328 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 MFAP4P55083 255 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 PLP1P60201 277 aa10.5□□□□□ -0.73
HERPUD1-202ENST00000344114 ZNF90Q03938 601 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms