RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 RPP30P78346 268 aaKnown RBP11.42□□□□□ -0.58
VAPA-201ENST00000340541 ZNF90Q03938 601 aa11.42□□□□□ -0.58
VAPA-201ENST00000340541 GBGT1Q8N5D6 347 aa11.42□□□□□ -0.58
VAPA-201ENST00000340541 IL17DQ8TAD2 202 aa11.42□□□□□ -0.58
VAPA-201ENST00000340541 SMIM8Q96KF7 97 aa11.42□□□□□ -0.58
VAPA-201ENST00000340541 RCL1Q9Y2P8 373 aaKnown RBP11.42□□□□□ -0.58
VAPA-201ENST00000340541 A0A1W2PS18 150 aa11.41□□□□□ -0.58
VAPA-201ENST00000340541 HNRNPCP07910 306 aaKnown RBP eCLIP11.41□□□□□ -0.581e-7■■□□□ 14.4
VAPA-201ENST00000340541 P2RY1P47900 373 aa11.41□□□□□ -0.58
VAPA-201ENST00000340541 TFPI2P48307 235 aa11.41□□□□□ -0.58
VAPA-201ENST00000340541 ZFAND6Q6FIF0 208 aa11.41□□□□□ -0.58
VAPA-201ENST00000340541 C12orf45Q8N5I9 185 aaPredicted RBP11.41□□□□□ -0.58
VAPA-201ENST00000340541 THAP8Q8NA92 274 aa11.41□□□□□ -0.58
VAPA-201ENST00000340541 MS4A6AQ9H2W1 248 aa11.41□□□□□ -0.58
VAPA-201ENST00000340541 TMEM231Q9H6L2 316 aa11.41□□□□□ -0.58
VAPA-201ENST00000340541 RETNQ9HD89 108 aa11.41□□□□□ -0.58
VAPA-201ENST00000340541 PSENENQ9NZ42 101 aa11.41□□□□□ -0.58
VAPA-201ENST00000340541 STRAPQ9Y3F4 350 aaKnown RBP11.41□□□□□ -0.58
VAPA-201ENST00000340541 ZFP92A6NM28 416 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 SCGB1D2O95969 90 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 MBPP02686 304 aaPredicted RBP11.4□□□□□ -0.58
VAPA-201ENST00000340541 IL5P05113 134 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 TMEM14EPQ6UXP3 125 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 NRARPQ7Z6K4 114 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 OR51G1Q8NGK1 321 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 GLMPQ8WWB7 406 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 RNF125Q96EQ8 232 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 TRGV9Q99603 122 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 GGTLC1Q9BX51 225 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 MAP6D1Q9H9H5 199 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 GSKIPQ9P0R6 139 aa11.4□□□□□ -0.58
VAPA-201ENST00000340541 CSMD3Q7Z407 3707 aa11.39□□□□□ -0.59
VAPA-201ENST00000340541 LOC102724200A0A096LPH7 203 aaPredicted RBP11.39□□□□□ -0.59
VAPA-201ENST00000340541 TRAV2A0A0B4J234 112 aa11.39□□□□□ -0.59
VAPA-201ENST00000340541 CCNKO75909 580 aa11.39□□□□□ -0.59
VAPA-201ENST00000340541 TAS2R30P59541 319 aa11.39□□□□□ -0.59
VAPA-201ENST00000340541 ZNF124Q15973 351 aa11.39□□□□□ -0.59
VAPA-201ENST00000340541 C16orf54Q6UWD8 224 aa11.39□□□□□ -0.59
VAPA-201ENST00000340541 ACOT7LQ6ZUV0 252 aa11.39□□□□□ -0.59
VAPA-201ENST00000340541 APRG1Q8IVJ8 170 aa11.39□□□□□ -0.59
VAPA-201ENST00000340541 FAM24BQ8N5W8 94 aa11.39□□□□□ -0.59
VAPA-201ENST00000340541 ENKURQ8TC29 256 aa11.39□□□□□ -0.59
VAPA-201ENST00000340541 RAB40CQ96S21 281 aa11.39□□□□□ -0.59
VAPA-201ENST00000340541 DYNC2H1Q8NCM8 4307 aaKnown RBP11.38□□□□□ -0.59
VAPA-201ENST00000340541 C7orf66A4D0T2 115 aa11.38□□□□□ -0.59
VAPA-201ENST00000340541 BUB3O43684 328 aa11.38□□□□□ -0.59
VAPA-201ENST00000340541 TSC22D2O75157 780 aa11.38□□□□□ -0.59
VAPA-201ENST00000340541 PAFAH1B2P68402 229 aa11.38□□□□□ -0.59
VAPA-201ENST00000340541 IL15RAQ13261 267 aa11.38□□□□□ -0.59
VAPA-201ENST00000340541 WFDC3Q8IUB2 231 aa11.38□□□□□ -0.59
VAPA-201ENST00000340541 STPG3Q8N7X2 389 aa11.38□□□□□ -0.59
VAPA-201ENST00000340541 GRAMD2BQ96HH9 432 aa11.38□□□□□ -0.59
VAPA-201ENST00000340541 NARS2Q96I59 477 aaKnown RBP11.38□□□□□ -0.59
VAPA-201ENST00000340541 C11orf1Q9H5F2 150 aa11.38□□□□□ -0.59
VAPA-201ENST00000340541 FAM25EA8MYX2 175 aa11.37□□□□□ -0.59
VAPA-201ENST00000340541 K7EQG2 157 aa11.37□□□□□ -0.59
VAPA-201ENST00000340541 METTL15P1P0C7V9 234 aa11.37□□□□□ -0.59
VAPA-201ENST00000340541 RPL11P62913 178 aaKnown RBP11.37□□□□□ -0.59
VAPA-201ENST00000340541 OR2F1Q13607 317 aa11.37□□□□□ -0.59
VAPA-201ENST00000340541 OR8G2PQ6IF36 304 aa11.37□□□□□ -0.59
VAPA-201ENST00000340541 TMEM182Q6ZP80 229 aaPredicted RBP11.37□□□□□ -0.59
VAPA-201ENST00000340541 DCANP1Q8TF63 244 aa11.37□□□□□ -0.59
VAPA-201ENST00000340541 C2orf50Q96LR7 162 aa11.37□□□□□ -0.59
VAPA-201ENST00000340541 RABAC1Q9UI14 185 aa11.37□□□□□ -0.59
VAPA-201ENST00000340541 LYSTQ99698 3801 aa11.36□□□□□ -0.59
VAPA-201ENST00000340541 C5orf51A6NDU8 294 aa11.36□□□□□ -0.59
VAPA-201ENST00000340541 HELTA6NFD8 242 aa11.36□□□□□ -0.59
VAPA-201ENST00000340541 SNRPGP15A8MWD9 76 aa11.36□□□□□ -0.59
VAPA-201ENST00000340541 K7EPK0 472 aa11.36□□□□□ -0.59
VAPA-201ENST00000340541 DNASE2O00115 360 aaPredicted RBP11.36□□□□□ -0.59
VAPA-201ENST00000340541 FABP1P07148 127 aa11.36□□□□□ -0.59
VAPA-201ENST00000340541 EIF2B2P49770 351 aaKnown RBP11.36□□□□□ -0.59
VAPA-201ENST00000340541 CMC4P56277 68 aaPredicted RBP11.36□□□□□ -0.59
VAPA-201ENST00000340541 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
VAPA-201ENST00000340541 TMEM144Q7Z5S9 345 aa11.36□□□□□ -0.59
VAPA-201ENST00000340541 STXBP6Q8NFX7 210 aa11.36□□□□□ -0.59
VAPA-201ENST00000340541 MARVELD1Q9BSK0 173 aa11.36□□□□□ -0.59
VAPA-201ENST00000340541 PBDC1Q9BVG4 233 aa11.36□□□□□ -0.59
VAPA-201ENST00000340541 INMT-MINDY4F8WBC2 141 aa11.35□□□□□ -0.59
VAPA-201ENST00000340541 LYZP61626 148 aa11.35□□□□□ -0.59
VAPA-201ENST00000340541 DLK1P80370 383 aa11.35□□□□□ -0.59
VAPA-201ENST00000340541 AKR1C1Q04828 323 aa11.35□□□□□ -0.59
VAPA-201ENST00000340541 RYR2Q92736 4967 aa11.34□□□□□ -0.59
VAPA-201ENST00000340541 KIR2DL5BA0A0G2JN68 375 aa11.34□□□□□ -0.59
VAPA-201ENST00000340541 KIR2DL5BA0A0G2JPC4 375 aa11.34□□□□□ -0.59
VAPA-201ENST00000340541 JTBO76095 146 aa11.34□□□□□ -0.59
VAPA-201ENST00000340541 RPL35AP18077 110 aaKnown RBP11.34□□□□□ -0.59
VAPA-201ENST00000340541 GATA2P23769 480 aaPredicted RBP11.34□□□□□ -0.59
VAPA-201ENST00000340541 DEFB131AP59861 70 aa11.34□□□□□ -0.59
VAPA-201ENST00000340541 GSG1LQ6UXU4 331 aa11.34□□□□□ -0.59
VAPA-201ENST00000340541 KIR2DL5AQ8N109 375 aa11.34□□□□□ -0.59
VAPA-201ENST00000340541 KIR2DL5BQ8NHK3 375 aa11.34□□□□□ -0.59
VAPA-201ENST00000340541 OVOL2Q9BRP0 275 aa11.34□□□□□ -0.59
VAPA-201ENST00000340541 GPN1Q9HCN4 374 aaPredicted RBP11.34□□□□□ -0.59
VAPA-201ENST00000340541 LSM5Q9Y4Y9 91 aaKnown RBP11.34□□□□□ -0.59
VAPA-201ENST00000340541 AGRNO00468 2067 aa11.33□□□□□ -0.6
VAPA-201ENST00000340541 FNDC10F2Z333 226 aa11.33□□□□□ -0.6
VAPA-201ENST00000340541 PRAF2O60831 178 aa11.33□□□□□ -0.6
VAPA-201ENST00000340541 CFDP00746 253 aaPredicted RBP11.33□□□□□ -0.6
VAPA-201ENST00000340541 AP2S1P53680 142 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms