RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 OR52E5Q8NH55 327 aa11.27□□□□□ -0.61
LINC01116-202ENST00000339037 PRRT1Q99946 306 aa11.27□□□□□ -0.61
LINC01116-202ENST00000339037 BCL7BQ9BQE9 202 aa11.27□□□□□ -0.61
LINC01116-202ENST00000339037 SLIRPQ9GZT3 109 aaKnown RBP11.27□□□□□ -0.61
LINC01116-202ENST00000339037 PRR13Q9NZ81 148 aa11.27□□□□□ -0.61
LINC01116-202ENST00000339037 CELA1Q9UNI1 258 aa11.27□□□□□ -0.61
LINC01116-202ENST00000339037 H3BMQ9 156 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 GSTZ1O43708 216 aaPredicted RBP11.26□□□□□ -0.61
LINC01116-202ENST00000339037 NXPH3O95157 252 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 P0DMU3 169 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 FAM231AP0DMU4 169 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 FAM231CP0DMU5 169 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 DHODHQ02127 395 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 TIGITQ495A1 244 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 ZNF767PQ75MW2 155 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 RAB40CQ96S21 281 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 C1QTNF4Q9BXJ3 329 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 HEYLQ9NQ87 328 aaPredicted RBP11.26□□□□□ -0.61
LINC01116-202ENST00000339037 RABL2AQ9UBK7 228 aaPredicted RBP11.26□□□□□ -0.61
LINC01116-202ENST00000339037 RABL2BQ9UNT1 228 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 TMEM56-RWDD3S4R434 201 aa11.26□□□□□ -0.61
LINC01116-202ENST00000339037 TRAV30A0A087WSZ9 112 aa11.25□□□□□ -0.61
LINC01116-202ENST00000339037 A0A1B0GVY2 172 aa11.25□□□□□ -0.61
LINC01116-202ENST00000339037 RPS10-NUDT3A0A1W2PQS6 291 aa11.25□□□□□ -0.61
LINC01116-202ENST00000339037 HTR2BP41595 481 aa11.25□□□□□ -0.61
LINC01116-202ENST00000339037 AP2S1P53680 142 aaPredicted RBP11.25□□□□□ -0.61
LINC01116-202ENST00000339037 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
LINC01116-202ENST00000339037 C12orf74Q32Q52 190 aa11.25□□□□□ -0.61
LINC01116-202ENST00000339037 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
LINC01116-202ENST00000339037 TMEM170AQ8WVE7 144 aa11.25□□□□□ -0.61
LINC01116-202ENST00000339037 NDUFAF3Q9BU61 184 aa11.25□□□□□ -0.61
LINC01116-202ENST00000339037 CEBPZOSA8MTT3 80 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 HNRNPCP07910 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
LINC01116-202ENST00000339037 IGLC1P0CG04 106 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 MED14OSP0DP75 135 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 TNFSF8P32971 234 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 SNRPD3P62318 126 aaKnown RBP11.24□□□□□ -0.61
LINC01116-202ENST00000339037 ANKRD39Q53RE8 183 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 C2orf83Q53S99 150 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 PRSS54Q6PEW0 395 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 SLC24A4Q8NFF2 622 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 Q8WTZ3 238 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 GLMPQ8WWB7 406 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 SOSTQ9BQB4 213 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 U3KQE9 123 aa11.24□□□□□ -0.61
LINC01116-202ENST00000339037 RND2P52198 227 aa11.23□□□□□ -0.61
LINC01116-202ENST00000339037 SUPT4H1P63272 117 aaKnown RBP11.23□□□□□ -0.61
LINC01116-202ENST00000339037 C16orf54Q6UWD8 224 aa11.23□□□□□ -0.61
LINC01116-202ENST00000339037 OR1S2Q8NGQ3 325 aa11.23□□□□□ -0.61
LINC01116-202ENST00000339037 MCFD2Q8NI22 146 aa11.23□□□□□ -0.61
LINC01116-202ENST00000339037 MCUBQ9NWR8 336 aa11.23□□□□□ -0.61
LINC01116-202ENST00000339037 XCL2Q9UBD3 114 aa11.23□□□□□ -0.61
LINC01116-202ENST00000339037 RSL24D1Q9UHA3 163 aaKnown RBP11.23□□□□□ -0.61
LINC01116-202ENST00000339037 SCP2D1Q9UJQ7 156 aa11.23□□□□□ -0.61
LINC01116-202ENST00000339037 FABP12A6NFH5 140 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 PRSS29PA6NIE9 313 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 FAM90A26D6RGX4 464 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 NOL3O60936 208 aaKnown RBP11.22□□□□□ -0.61
LINC01116-202ENST00000339037 IL4P05112 153 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 SULT1A3P0DMM9 295 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 SULT1A4P0DMN0 295 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 SLC25A4P12235 298 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 NPY1RP25929 384 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 OR10J1P30954 320 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 YPEL3P61236 119 aaPredicted RBP11.22□□□□□ -0.61
LINC01116-202ENST00000339037 RNASEH2CQ8TDP1 164 aaKnown RBP11.22□□□□□ -0.61
LINC01116-202ENST00000339037 IL22RA2Q969J5 263 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 NRN1Q9NPD7 142 aa11.22□□□□□ -0.61
LINC01116-202ENST00000339037 H3BMM0 161 aa11.21□□□□□ -0.61
LINC01116-202ENST00000339037 M0R2N4 97 aa11.21□□□□□ -0.61
LINC01116-202ENST00000339037 RTL8CO15255 209 aa11.21□□□□□ -0.61
LINC01116-202ENST00000339037 AKR1C4P17516 323 aa11.21□□□□□ -0.61
LINC01116-202ENST00000339037 USF2Q15853 346 aaPredicted RBP11.21□□□□□ -0.61
LINC01116-202ENST00000339037 NMSQ5H8A3 153 aa11.21□□□□□ -0.61
LINC01116-202ENST00000339037 LYZL2Q7Z4W2 148 aa11.21□□□□□ -0.61
LINC01116-202ENST00000339037 SEPSECSQ9HD40 501 aaKnown RBP11.21□□□□□ -0.61
LINC01116-202ENST00000339037 KCNIP3Q9Y2W7 256 aa11.21□□□□□ -0.61
LINC01116-202ENST00000339037 A0A0B4J2A0 478 aa11.2□□□□□ -0.62
LINC01116-202ENST00000339037 SIGLEC15Q6ZMC9 328 aa11.2□□□□□ -0.62
LINC01116-202ENST00000339037 TRIM63Q969Q1 353 aa11.2□□□□□ -0.62
LINC01116-202ENST00000339037 HSPB7Q9UBY9 170 aa11.2□□□□□ -0.62
LINC01116-202ENST00000339037 SHPKQ9UHJ6 478 aa11.2□□□□□ -0.62
LINC01116-202ENST00000339037 BUB3O43684 328 aa11.19□□□□□ -0.62
LINC01116-202ENST00000339037 SPART-AS1P0CW21 52 aa11.19□□□□□ -0.62
LINC01116-202ENST00000339037 HLA-DRB4P13762 266 aa11.19□□□□□ -0.62
LINC01116-202ENST00000339037 KLF9Q13886 244 aaPredicted RBP11.19□□□□□ -0.62
LINC01116-202ENST00000339037 SMCO1Q147U7 214 aa11.19□□□□□ -0.62
LINC01116-202ENST00000339037 ETFRF1Q6IPR1 90 aa11.19□□□□□ -0.62
LINC01116-202ENST00000339037 ZNF705AQ6ZN79 300 aaPredicted RBP11.19□□□□□ -0.62
LINC01116-202ENST00000339037 ACY3Q96HD9 319 aa11.19□□□□□ -0.62
LINC01116-202ENST00000339037 SCGB3A2Q96PL1 93 aa11.19□□□□□ -0.62
LINC01116-202ENST00000339037 RBKSQ9H477 322 aa11.19□□□□□ -0.62
LINC01116-202ENST00000339037 V9GYH0 126 aa11.19□□□□□ -0.62
LINC01116-202ENST00000339037 HLA-DRB4X5D2U9 266 aa11.19□□□□□ -0.62
LINC01116-202ENST00000339037 TMEM189A5PLL7 270 aa11.18□□□□□ -0.62
LINC01116-202ENST00000339037 IFNA10P01566 189 aa11.18□□□□□ -0.62
LINC01116-202ENST00000339037 H2AFB1P0C5Y9 115 aa11.18□□□□□ -0.62
LINC01116-202ENST00000339037 H2AFB2P0C5Z0 115 aa11.18□□□□□ -0.62
LINC01116-202ENST00000339037 RD3LP0DJH9 198 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms