RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 LINC00310P59036 64 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 BSPH1Q075Z2 132 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 ADIPOQQ15848 244 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 VMA21Q3ZAQ7 101 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 ZNF672Q499Z4 452 aaPredicted RBP8.67□□□□□ -1.02
RTN3-201ENST00000338850 TMEM155Q4W5P6 130 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 LRRC10Q5BKY1 277 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 CT83Q5H943 113 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 UTF1Q5T230 341 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 ATP5L2Q7Z4Y8 100 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 TEX45Q8NA69 505 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 OR5T1Q8NG75 326 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 OR9G1Q8NH87 305 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 LEAP2Q969E1 77 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 TRGV9Q99603 122 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 SRSF8Q9BRL6 282 aaKnown RBP8.67□□□□□ -1.02
RTN3-201ENST00000338850 SLC25A2Q9BXI2 301 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 DNAJC4Q9NNZ3 241 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 PPIAL4AQ9Y536 164 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 SOX21Q9Y651 276 aaPredicted RBP8.67□□□□□ -1.02
RTN3-201ENST00000338850 TNCP24821 2201 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 IZUMO1RA6ND01 250 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 SNURFLB1AK76 121 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 C22orf46C9J442 243 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 INAFM1C9JVW0 142 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 OR7C2O60412 319 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 FOXH1O75593 365 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 RD3LP0DJH9 198 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 CBLN1P23435 193 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 CRYBB3P26998 211 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 BRS3P32247 399 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 GNG10P50151 68 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 KRTAP1-1Q07627 177 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 CLEC12BQ2HXU8 276 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 FAM201AQ5SY85 155 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 DUX4L9Q6RFH8 374 aaPredicted RBP8.66□□□□□ -1.02
RTN3-201ENST00000338850 VHLLQ6RSH7 139 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 TMEM136Q6ZRR5 245 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 PRIMA1Q86XR5 153 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 ZCCHC24Q8N2G6 241 aaKnown RBP8.66□□□□□ -1.02
RTN3-201ENST00000338850 TMEM256Q8N2U0 113 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 PRO1933Q9H354 126 aa8.66□□□□□ -1.02
RTN3-201ENST00000338850 POLR3KQ9Y2Y1 108 aaPredicted RBP8.66□□□□□ -1.02
RTN3-201ENST00000338850 SONP18583 2426 aaKnown RBP8.65□□□□□ -1.02
RTN3-201ENST00000338850 ATRQ13535 2644 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 TRBV6-1A0A0K0K1D8 114 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 ZNF705GA8MUZ8 300 aaPredicted RBP8.65□□□□□ -1.02
RTN3-201ENST00000338850 FCN1O00602 326 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 NDUFB3O43676 98 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 OR2J3O76001 311 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 NDUFB7P17568 137 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 RAB4AP20338 218 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 CDKN1AP38936 164 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 UBE2L3P68036 154 aaKnown RBP8.65□□□□□ -1.02
RTN3-201ENST00000338850 TMEM183BQ1AE95 376 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 IBA57Q5T440 356 aaKnown RBP8.65□□□□□ -1.02
RTN3-201ENST00000338850 TPTE2P1Q5T6R2 138 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 FAM162BQ5T6X4 162 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 OR5AU1Q8NGC0 362 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 OR4B1Q8NGF8 309 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 KCNS1Q96KK3 526 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 RNF5Q99942 180 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 HINT2Q9BX68 163 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 SAP30LQ9HAJ7 183 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 ZNF586Q9NXT0 402 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 KLF12Q9Y4X4 402 aa8.65□□□□□ -1.02
RTN3-201ENST00000338850 YLPM1P49750 1951 aaKnown RBP8.64□□□□□ -1.03
RTN3-201ENST00000338850 PLCE1Q9P212 2302 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 IGKV1D-37A0A075B6S9 117 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 CGB1A6NKQ9 187 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 SHISA9B4DS77 424 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 COX7A2P2O60397 106 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 SERF1AO75920 110 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 IGHV4-39P01824 125 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 KLF5Q13887 457 aaPredicted RBP8.64□□□□□ -1.03
RTN3-201ENST00000338850 PRSS8Q16651 343 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 C10orf113Q5VZT2 155 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 TMEM200BQ69YZ2 307 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 C19orf35Q6ZS72 473 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 Q6ZWC4 215 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 DTX2Q86UW9 622 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 OR8I2Q8N0Y5 310 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 TMEM116Q8NCL8 245 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 C22orf15Q8WYQ4 148 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 GRAMD2BQ96HH9 432 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 PAXXQ9BUH6 204 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 C7orf69Q9H7B7 122 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 AURKAIP1Q9NWT8 199 aaPredicted RBP8.64□□□□□ -1.03
RTN3-201ENST00000338850 ZNF492Q9P255 531 aa8.64□□□□□ -1.03
RTN3-201ENST00000338850 DNHD1Q96M86 4753 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 COL6A5A8TX70 2615 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 FAM231BA6NCW3 169 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 M0R143 59 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 SLC17A3O00476 420 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 PEX7O00628 323 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 NDUFS7O75251 213 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 ACTL6BO94805 426 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 SCGB1D1O95968 90 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 IGHV3-7P01780 117 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms